FFCP PHASE1:Mm9::chr19:55973086..55973096,+: Difference between revisions
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|id=chr19:55973086..55973096,+
|short_description=p@chr19:55973086..55973096,+
|description=CAGE_peak_at_chr19:55973086..55973096,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=141 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:55973086..55973096,+ | |||
|description=CAGE_peak_at_chr19:55973086..55973096,+ | |||
|id=chr19:55973086..55973096,+ | |||
|ontology_enrichment_celltype=CL:0002613!2.91e-11!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002613,4.90e-53,3;CL:0000117,1.12e-07,23;CL:0000337,1.12e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000369!6.19e-11!5;UBERON:0002435!6.19e-11!5;UBERON:0000204!6.19e-11!5;UBERON:0010082!6.19e-11!5;UBERON:0002420!7.80e-07!8;UBERON:0007245!7.80e-07!8;UBERON:0010009!7.80e-07!8;UBERON:0010011!7.80e-07!8;UBERON:0000454!7.80e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,2.89e-32,5;UBERON:0002435,2.89e-32,5;UBERON:0000204,2.89e-32,5;UBERON:0010082,2.89e-32,5;UBERON:0002420,1.53e-20,8;UBERON:0007245,1.53e-20,8;UBERON:0010009,1.53e-20,8;UBERON:0010011,1.53e-20,8;UBERON:0000454,1.53e-20,8;UBERON:0002780,8.01e-08,39;UBERON:0001890,8.01e-08,39;UBERON:0006240,8.01e-08,39;UBERON:0003080,1.22e-07,40 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,0,0.633831403506179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.766124028511126,0.46081959976873,2.2420668914133,3.7509933876988,6.25096044668112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599162557619291,0,0.125654352112864,0,0,1.0389402227978,0.973447578406546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0,0,0.183843508450014,0,0,0.320919209591815,0,0.50695859978048,0,0.187283014939765,0,0,0,0.347652977834566,0.192909220463705,0,0.147198920134397,0,0,0,0.145346416632329,0,0.169229215783353,0,0,0,0,0.118635018124174,0.197008964751127,0,0,0,0,0,0.214871054048298,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,0,0.633831403506179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.766124028511126,0.46081959976873,2.2420668914133,3.7509933876988,6.25096044668112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599162557619291,0,0.125654352112864,0,0,1.0389402227978,0.973447578406546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0,0,0.183843508450014,0,0,0.320919209591815,0,0.50695859978048,0,0.187283014939765,0,0,0,0.347652977834566,0.192909220463705,0,0.147198920134397,0,0,0,0.145346416632329,0,0.169229215783353,0,0,0,0,0.118635018124174,0.197008964751127,0,0,0,0,0,0.214871054048298,0,0,0 | ||
|short_description=p@chr19:55973086..55973096,+ | |||
}} | }} |
Latest revision as of 09:01, 4 August 2015
Short description: | p@chr19:55973086..55973096, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:55973086..55973096, + |
Coexpression cluster: | MCL_coexpression_mm9:141 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
striatum neuron | 4.90e-53 | 3 |
CNS neuron (sensu Vertebrata) | 1.12e-07 | 23 |
neuroblast (sensu Vertebrata) | 1.12e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
corpus striatum | 2.89e-32 | 5 |
striatum | 2.89e-32 | 5 |
ventral part of telencephalon | 2.89e-32 | 5 |
future corpus striatum | 2.89e-32 | 5 |
basal ganglion | 1.53e-20 | 8 |
nuclear complex of neuraxis | 1.53e-20 | 8 |
aggregate regional part of brain | 1.53e-20 | 8 |
collection of basal ganglia | 1.53e-20 | 8 |
cerebral subcortex | 1.53e-20 | 8 |
regional part of forebrain | 8.01e-08 | 39 |
forebrain | 8.01e-08 | 39 |
future forebrain | 8.01e-08 | 39 |
anterior neural tube | 1.22e-07 | 40 |