FFCP PHASE1:Mm9::chr19:56006193..56006206,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=141 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:56006193..56006206,+ | |||
|description=CAGE_peak_at_chr19:56006193..56006206,+ | |||
|id=chr19:56006193..56006206,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002613,4.58e-44,3;CL:0000120,1.59e-20,3;CL:0000117,2.52e-16,23;CL:0000337,2.52e-16,23;CL:0000540,1.59e-11,33;CL:0000047,1.59e-11,33;CL:0000031,1.59e-11,33;CL:0000404,1.59e-11,33;CL:0000393,8.12e-10,39;CL:0000211,8.12e-10,39;CL:0002319,6.12e-09,43;CL:0000221,9.58e-09,44;CL:0000133,9.58e-09,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,7.67e-27,5;UBERON:0002435,7.67e-27,5;UBERON:0000204,7.67e-27,5;UBERON:0010082,7.67e-27,5;UBERON:0002420,4.11e-17,8;UBERON:0007245,4.11e-17,8;UBERON:0010009,4.11e-17,8;UBERON:0010011,4.11e-17,8;UBERON:0000454,4.11e-17,8 | |||
|phase1_expression=0.160148847104794,0,0,0.30246421130683,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.255129870453209,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0.101376931219515,0.550640256485045,0,0,0,0.194429899074283,0,0,0,0,0,0.257259436035947,0,0,0.809265843438391,2.64495489636016,2.53532561402472,0,0,0.449949858640699,0,0,0.299600110518405,0.384218305321555,0.207379224616955,0,0,0,0.220868540951614,0,0.0958454710182364,0,0,0.638436690425939,0.614426133024974,2.1101806036831,3.84248103130121,2.08365348222704,0.837548997004143,0,0.30559649555362,0.294628585473668,0,0,0,0,0,0,0,0,0.649776417447669,0,0,0.170430322578058,0.259786004602869,0.35333957451034,0,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0.913396434936424,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0,0,0.255457055208591,0,0,0,0.299581278809645,0,0,0,0,0.62336413367868,0,0.203678727700633,0.124406970610093,0,0,0.130120442962704,0,0,0,0.0680364991513279,0.2562274405697,0.0937017245597288,0,0.215567992932842,0,0,0.219195732427575,0,0,0.205782136407943,0.199034266818493,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0.23674473558521,0,0.154267112887378,0.465067889500816,0,0,0,0,0.162137619091711,0.438599962275997,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0.432276099749388,0.199141273254367,0,0,0,0.203651327845314,0,0.280543279561274,0.189709611372772,0.147610147979602,0,0.123397163921801,0,0.166845105716094,0.196558995113203,0.224862112384854,0.202860121388503,0,0,0,0.486405680325106,0,0,0,0,0,0.179397413521912,0,0,0,0.162964976442026,0,0,0,0.238043640886014,0,0,0,0.159454768657487,0.491589944147214,0,0.289298117163023,0,0,0,0,0,0,0,0.252470927204373,0,0.390438744296638,0,0,0,0,0.404810701674894,0,0,0,0.141940085208269,0.178065603667255,0,0,0,0.485561272309963,0,0,0,0,0,0,0,0,0,0,0,0.540183282093931,0.129358683782755,0,0.177340233642274,0.178368817602071,0.164549020602121,0,0,0,0,0.32977250588296,0.484393280087717,0,0.358117032009409,0,0,0.18542530201051,0.170870880797853,0,0,0,0,0.228778173206523,0.169978429993855,0,0,0,0.158167996790568,0.203319467126849,0,0,0.87345025498471,0.134864346384821,0.0826534557253359,0.26175594198403,0,0,0,0,0,0.388902376688095,0.129159823477731,0,0.117357238645754,0,0,0.241584120826006,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0.116876902181569,0,0,0.0897138566094757,0.167884616364078,0,0.187682475451182,0,0,0.501572104035363,0,0,0.572895513439397,0,0,0,0,0,0,0,0.103787347584177,1.19707462020309,0.170733605754134,0,0.209613162627982,0.183843508450014,0,0,0,0,0,0,0,0.192075457214608,0.0574354689556133,0,0.231768651889711,0,0,0.588795680537589,0,0.177475806159338,0,0.436039249896986,0.0941093804153306,0.0846146078916765,0,0.526139422875686,0,0.561142271657738,0,0,0.409231043169689,0,0.385813221962283,0,0,0.214871054048298,0,0,0 | |phase1_expression=0.160148847104794,0,0,0.30246421130683,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.255129870453209,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0.101376931219515,0.550640256485045,0,0,0,0.194429899074283,0,0,0,0,0,0.257259436035947,0,0,0.809265843438391,2.64495489636016,2.53532561402472,0,0,0.449949858640699,0,0,0.299600110518405,0.384218305321555,0.207379224616955,0,0,0,0.220868540951614,0,0.0958454710182364,0,0,0.638436690425939,0.614426133024974,2.1101806036831,3.84248103130121,2.08365348222704,0.837548997004143,0,0.30559649555362,0.294628585473668,0,0,0,0,0,0,0,0,0.649776417447669,0,0,0.170430322578058,0.259786004602869,0.35333957451034,0,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0.913396434936424,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0,0,0.255457055208591,0,0,0,0.299581278809645,0,0,0,0,0.62336413367868,0,0.203678727700633,0.124406970610093,0,0,0.130120442962704,0,0,0,0.0680364991513279,0.2562274405697,0.0937017245597288,0,0.215567992932842,0,0,0.219195732427575,0,0,0.205782136407943,0.199034266818493,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0.23674473558521,0,0.154267112887378,0.465067889500816,0,0,0,0,0.162137619091711,0.438599962275997,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0.432276099749388,0.199141273254367,0,0,0,0.203651327845314,0,0.280543279561274,0.189709611372772,0.147610147979602,0,0.123397163921801,0,0.166845105716094,0.196558995113203,0.224862112384854,0.202860121388503,0,0,0,0.486405680325106,0,0,0,0,0,0.179397413521912,0,0,0,0.162964976442026,0,0,0,0.238043640886014,0,0,0,0.159454768657487,0.491589944147214,0,0.289298117163023,0,0,0,0,0,0,0,0.252470927204373,0,0.390438744296638,0,0,0,0,0.404810701674894,0,0,0,0.141940085208269,0.178065603667255,0,0,0,0.485561272309963,0,0,0,0,0,0,0,0,0,0,0,0.540183282093931,0.129358683782755,0,0.177340233642274,0.178368817602071,0.164549020602121,0,0,0,0,0.32977250588296,0.484393280087717,0,0.358117032009409,0,0,0.18542530201051,0.170870880797853,0,0,0,0,0.228778173206523,0.169978429993855,0,0,0,0.158167996790568,0.203319467126849,0,0,0.87345025498471,0.134864346384821,0.0826534557253359,0.26175594198403,0,0,0,0,0,0.388902376688095,0.129159823477731,0,0.117357238645754,0,0,0.241584120826006,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0.116876902181569,0,0,0.0897138566094757,0.167884616364078,0,0.187682475451182,0,0,0.501572104035363,0,0,0.572895513439397,0,0,0,0,0,0,0,0.103787347584177,1.19707462020309,0.170733605754134,0,0.209613162627982,0.183843508450014,0,0,0,0,0,0,0,0.192075457214608,0.0574354689556133,0,0.231768651889711,0,0,0.588795680537589,0,0.177475806159338,0,0.436039249896986,0.0941093804153306,0.0846146078916765,0,0.526139422875686,0,0.561142271657738,0,0,0.409231043169689,0,0.385813221962283,0,0,0.214871054048298,0,0,0 | ||
|short_description=p@chr19:56006193..56006206,+ | |||
}} | }} |
Latest revision as of 09:05, 4 August 2015
Short description: | p@chr19:56006193..56006206, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:56006193..56006206, + |
Coexpression cluster: | MCL_coexpression_mm9:141 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
striatum neuron | 4.58e-44 | 3 |
granule cell | 1.59e-20 | 3 |
CNS neuron (sensu Vertebrata) | 2.52e-16 | 23 |
neuroblast (sensu Vertebrata) | 2.52e-16 | 23 |
neuron | 1.59e-11 | 33 |
neuronal stem cell | 1.59e-11 | 33 |
neuroblast | 1.59e-11 | 33 |
electrically signaling cell | 1.59e-11 | 33 |
electrically responsive cell | 8.12e-10 | 39 |
electrically active cell | 8.12e-10 | 39 |
neural cell | 6.12e-09 | 43 |
ectodermal cell | 9.58e-09 | 44 |
neurectodermal cell | 9.58e-09 | 44 |
Ontology term | p-value | n |
---|---|---|
corpus striatum | 7.67e-27 | 5 |
striatum | 7.67e-27 | 5 |
ventral part of telencephalon | 7.67e-27 | 5 |
future corpus striatum | 7.67e-27 | 5 |
basal ganglion | 4.11e-17 | 8 |
nuclear complex of neuraxis | 4.11e-17 | 8 |
aggregate regional part of brain | 4.11e-17 | 8 |
collection of basal ganglia | 4.11e-17 | 8 |
cerebral subcortex | 4.11e-17 | 8 |