FFCP PHASE1:Mm9::chr19:56007662..56007673,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=141 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:56007662..56007673,+ | |||
|description=CAGE_peak_at_chr19:56007662..56007673,+ | |description=CAGE_peak_at_chr19:56007662..56007673,+ | ||
|id=chr19:56007662..56007673,+ | |id=chr19:56007662..56007673,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002613,1.17e-38,3;CL:0000117,1.06e-26,23;CL:0000337,1.06e-26,23;CL:0000540,1.03e-18,33;CL:0000047,1.03e-18,33;CL:0000031,1.03e-18,33;CL:0000404,1.03e-18,33;CL:0000120,2.33e-17,3;CL:0002610,2.33e-17,3;CL:0000393,7.07e-16,39;CL:0000211,7.07e-16,39;CL:0002319,2.01e-14,43;CL:0000221,4.23e-14,44;CL:0000133,4.23e-14,44;CL:0002321,6.38e-09,70;CL:0000723,7.08e-07,91;CL:0000048,7.08e-07,91 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,1.45e-23,5;UBERON:0002435,1.45e-23,5;UBERON:0000204,1.45e-23,5;UBERON:0010082,1.45e-23,5;UBERON:0004684,2.33e-17,3;UBERON:0002275,2.33e-17,3;UBERON:0002420,4.93e-15,8;UBERON:0007245,4.93e-15,8;UBERON:0010009,4.93e-15,8;UBERON:0010011,4.93e-15,8;UBERON:0000454,4.93e-15,8;UBERON:0001017,1.47e-08,73;UBERON:0001016,2.47e-08,75 | |||
|phase1_expression=0,0,0,0,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0.45881856213434,0,0,0,0.380046838912748,0.252030129759931,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0.183546752161682,0.782391344348039,0,0,0.58328969722285,0,0,0,0,0,0,0,0.515672092277442,0.606949382578793,1.05798195854407,1.26766280701236,0,0,0,0,0,0.299600110518405,0.384218305321555,0,0,0,0,0.220868540951614,0,0,0,2.20231761998777,1.0214987046815,0.921639199537461,2.50583946687368,4.94033275453012,3.12548022334056,0,0,0,0,0,0.186399445825301,0,0,0,0,0,0,0.649776417447669,0,0,0.170430322578058,0,0.70667914902068,0,0,0,0,0,0.253359865475099,0.505524445014783,0.11418387971906,0,0.148442139064825,0,0,0,0,0.117588707135705,0.125666591329675,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0.898743836428936,0,0,0,0,0.20778804455956,0.162241263067758,0,0.124406970610093,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0.232533944750408,0.536546802799238,0.116765342367169,0,0,0,0,0,0,0,0,0.330418782983798,0,0.213288250535234,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0.199141273254367,0.189667900953082,0,0,0.407302655690628,0.193952487167626,0.0701358198903186,0,0,0,0,0.296452627087149,0,0,0.224862112384854,0,0,0.25462585178142,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0.144649058581512,0,0,0,0.275936746304732,0,0,0,0,0,0.390438744296638,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0.18006109403131,0.129358683782755,0,0.177340233642274,0.178368817602071,0,0,0,0.21183207086382,0.220528398054962,0,0,0,0,0,0,0.18542530201051,0.170870880797853,0,0,0.188368457004691,0,0,0,0,0,0,0,0,0.324016022465404,0,0.218362563746178,0,0.0826534557253359,0.26175594198403,0,0,0,0,0.165458490457098,0,0.129159823477731,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0.147689527174577,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31136204275253,0,0.170733605754134,0.243106717068294,0.209613162627982,0.183843508450014,0,0,0,0,0.50695859978048,0,0.187283014939765,0,0.0574354689556133,0,0.115884325944855,0.192909220463705,0,0,0,0,0.238436189947321,0,0.188218760830661,0,0.182927972872773,0.263069711437843,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | |phase1_expression=0,0,0,0,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0.45881856213434,0,0,0,0.380046838912748,0.252030129759931,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0.183546752161682,0.782391344348039,0,0,0.58328969722285,0,0,0,0,0,0,0,0.515672092277442,0.606949382578793,1.05798195854407,1.26766280701236,0,0,0,0,0,0.299600110518405,0.384218305321555,0,0,0,0,0.220868540951614,0,0,0,2.20231761998777,1.0214987046815,0.921639199537461,2.50583946687368,4.94033275453012,3.12548022334056,0,0,0,0,0,0.186399445825301,0,0,0,0,0,0,0.649776417447669,0,0,0.170430322578058,0,0.70667914902068,0,0,0,0,0,0.253359865475099,0.505524445014783,0.11418387971906,0,0.148442139064825,0,0,0,0,0.117588707135705,0.125666591329675,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0.898743836428936,0,0,0,0,0.20778804455956,0.162241263067758,0,0.124406970610093,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0.232533944750408,0.536546802799238,0.116765342367169,0,0,0,0,0,0,0,0,0.330418782983798,0,0.213288250535234,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0.199141273254367,0.189667900953082,0,0,0.407302655690628,0.193952487167626,0.0701358198903186,0,0,0,0,0.296452627087149,0,0,0.224862112384854,0,0,0.25462585178142,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0.144649058581512,0,0,0,0.275936746304732,0,0,0,0,0,0.390438744296638,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0.18006109403131,0.129358683782755,0,0.177340233642274,0.178368817602071,0,0,0,0.21183207086382,0.220528398054962,0,0,0,0,0,0,0.18542530201051,0.170870880797853,0,0,0.188368457004691,0,0,0,0,0,0,0,0,0.324016022465404,0,0.218362563746178,0,0.0826534557253359,0.26175594198403,0,0,0,0,0.165458490457098,0,0.129159823477731,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0.147689527174577,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31136204275253,0,0.170733605754134,0.243106717068294,0.209613162627982,0.183843508450014,0,0,0,0,0.50695859978048,0,0.187283014939765,0,0.0574354689556133,0,0.115884325944855,0.192909220463705,0,0,0,0,0.238436189947321,0,0.188218760830661,0,0.182927972872773,0.263069711437843,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | ||
|short_description=p@chr19:56007662..56007673,+ | |short_description=p@chr19:56007662..56007673,+ | ||
}} | }} |
Latest revision as of 09:07, 4 August 2015
Short description: | p@chr19:56007662..56007673, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:56007662..56007673, + |
Coexpression cluster: | MCL_coexpression_mm9:141 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
striatum neuron | 1.17e-38 | 3 |
CNS neuron (sensu Vertebrata) | 1.06e-26 | 23 |
neuroblast (sensu Vertebrata) | 1.06e-26 | 23 |
neuron | 1.03e-18 | 33 |
neuronal stem cell | 1.03e-18 | 33 |
neuroblast | 1.03e-18 | 33 |
electrically signaling cell | 1.03e-18 | 33 |
granule cell | 2.33e-17 | 3 |
raphe nuclei neuron | 2.33e-17 | 3 |
electrically responsive cell | 7.07e-16 | 39 |
electrically active cell | 7.07e-16 | 39 |
neural cell | 2.01e-14 | 43 |
ectodermal cell | 4.23e-14 | 44 |
neurectodermal cell | 4.23e-14 | 44 |
embryonic cell | 6.38e-09 | 70 |
somatic stem cell | 7.08e-07 | 91 |
multi fate stem cell | 7.08e-07 | 91 |
Ontology term | p-value | n |
---|---|---|
corpus striatum | 1.45e-23 | 5 |
striatum | 1.45e-23 | 5 |
ventral part of telencephalon | 1.45e-23 | 5 |
future corpus striatum | 1.45e-23 | 5 |
raphe nuclei | 2.33e-17 | 3 |
reticular formation | 2.33e-17 | 3 |
basal ganglion | 4.93e-15 | 8 |
nuclear complex of neuraxis | 4.93e-15 | 8 |
aggregate regional part of brain | 4.93e-15 | 8 |
collection of basal ganglia | 4.93e-15 | 8 |
cerebral subcortex | 4.93e-15 | 8 |
central nervous system | 1.47e-08 | 73 |
nervous system | 2.47e-08 | 75 |