FFCP PHASE1:Mm9::chr2:157387508..157387519,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:157387508..157387519,+
|short_description=p@chr2:157387508..157387519,+
|description=CAGE_peak_at_chr2:157387508..157387519,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=470 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:157387508..157387519,+ | |||
|description=CAGE_peak_at_chr2:157387508..157387519,+ | |||
|id=chr2:157387508..157387519,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.77e-17!23;CL:0000337!1.77e-17!23;CL:0000540!2.15e-14!33;CL:0000047!2.15e-14!33;CL:0000031!2.15e-14!33;CL:0000404!2.15e-14!33;CL:0000221!2.99e-13!44;CL:0000133!2.99e-13!44;CL:0002319!4.05e-13!43;CL:0000393!1.70e-10!39;CL:0000211!1.70e-10!39;CL:0000055!1.37e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.61e-39,23;CL:0000337,1.61e-39,23;CL:0000540,4.22e-26,33;CL:0000047,4.22e-26,33;CL:0000031,4.22e-26,33;CL:0000404,4.22e-26,33;CL:0002319,3.26e-23,43;CL:0000221,1.44e-22,44;CL:0000133,1.44e-22,44;CL:0000393,2.35e-21,39;CL:0000211,2.35e-21,39;CL:0002609,5.60e-15,6;CL:0002321,2.75e-12,70;CL:0002613,4.53e-09,3;CL:0000120,6.88e-09,3;CL:0000723,2.65e-08,91;CL:0000048,2.65e-08,91;CL:0002608,3.47e-08,3;CL:0002612,7.56e-08,3;CL:0000034,1.73e-07,97;CL:0002614,3.39e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.29e-20!73;UBERON:0005743!1.29e-20!73;UBERON:0000073!3.57e-20!75;UBERON:0001016!3.57e-20!75;UBERON:0004121!4.01e-19!102;UBERON:0000924!4.01e-19!102;UBERON:0006601!4.01e-19!102;UBERON:0001049!5.50e-17!52;UBERON:0005068!5.50e-17!52;UBERON:0006241!5.50e-17!52;UBERON:0007135!5.50e-17!52;UBERON:0003056!8.93e-17!49;UBERON:0000033!2.71e-16!63;UBERON:0002780!8.08e-16!39;UBERON:0001890!8.08e-16!39;UBERON:0006240!8.08e-16!39;UBERON:0000955!3.31e-15!50;UBERON:0006238!3.31e-15!50;UBERON:0002346!3.51e-15!71;UBERON:0003075!3.51e-15!71;UBERON:0007284!3.51e-15!71;UBERON:0003080!4.28e-15!40;UBERON:0002616!1.22e-14!49;UBERON:0002020!2.54e-12!34;UBERON:0000153!2.59e-10!94;UBERON:0002791!5.38e-09!29;UBERON:0003528!5.38e-09!29;UBERON:0001893!5.38e-09!29;UBERON:0001894!9.06e-09!10;UBERON:0006222!9.06e-09!10;UBERON:0007811!1.50e-08!86;UBERON:0000007!1.78e-08!8;UBERON:0003296!1.78e-08!8;UBERON:0010133!1.78e-08!8;UBERON:0002420!1.85e-07!8;UBERON:0007245!1.85e-07!8;UBERON:0010009!1.85e-07!8;UBERON:0010011!1.85e-07!8;UBERON:0000454!1.85e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.92e-32,52;UBERON:0005068,2.92e-32,52;UBERON:0006241,2.92e-32,52;UBERON:0007135,2.92e-32,52;UBERON:0001017,1.79e-31,73;UBERON:0000073,7.79e-31,54;UBERON:0001016,1.88e-30,75;UBERON:0002780,9.92e-30,39;UBERON:0001890,9.92e-30,39;UBERON:0006240,9.92e-30,39;UBERON:0003080,7.51e-29,40;UBERON:0002346,4.85e-25,64;UBERON:0003075,4.85e-25,64;UBERON:0007284,4.85e-25,64;UBERON:0002616,2.22e-24,46;UBERON:0002020,2.70e-24,34;UBERON:0000955,9.58e-24,47;UBERON:0006238,9.58e-24,47;UBERON:0004121,1.32e-22,95;UBERON:0000924,1.32e-22,95;UBERON:0006601,1.32e-22,95;UBERON:0003056,1.49e-22,49;UBERON:0010371,3.51e-21,73;UBERON:0000007,1.02e-20,8;UBERON:0003296,1.02e-20,8;UBERON:0010133,1.02e-20,8;UBERON:0001894,2.81e-16,10;UBERON:0006222,2.81e-16,10;UBERON:0003528,6.28e-16,29;UBERON:0002791,6.28e-16,29;UBERON:0001893,6.28e-16,29;UBERON:0010314,1.64e-15,92;UBERON:0002420,1.84e-14,8;UBERON:0007245,1.84e-14,8;UBERON:0010009,1.84e-14,8;UBERON:0010011,1.84e-14,8;UBERON:0000454,1.84e-14,8;UBERON:0001948,1.25e-11,5;UBERON:0002315,1.25e-11,5;UBERON:0000025,2.61e-11,114;UBERON:0004111,3.70e-10,122;UBERON:0002240,1.21e-09,6;UBERON:0005174,1.21e-09,6;UBERON:0001137,1.21e-09,6;UBERON:0000369,6.79e-09,5;UBERON:0002435,6.79e-09,5;UBERON:0000204,6.79e-09,5;UBERON:0010082,6.79e-09,5;UBERON:0002257,7.56e-08,3;UBERON:0011216,1.69e-07,194;UBERON:0002038,3.39e-07,3;UBERON:0009663,3.39e-07,3;UBERON:0009661,3.39e-07,3;UBERON:0000125,3.39e-07,3;UBERON:0002308,3.39e-07,3 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0.139986421625363,0,0,0,0,0,0,0,7.89034197352431,11.6378015439847,6.33831403506179,0,0,0,0,0,1.19840044207362,2.30530983192933,3.7328260431052,7.83034442323806,3.78584930432488,1.14260393761521,2.20868540951614,2.69479758272899,4.79227355091182,4.5960939330501,0,0.893811366596314,0.46081959976873,7.78129097608144,14.0890971147711,8.33461392890816,1.3959149950069,1.12552522006336,1.37518422999129,3.24091444021034,2.42031857358475,2.42319279572891,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0.346970653532272,0,0,0.150722640552623,0,0,0.494389935468748,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,0.457500602818626,2.63874139437015,0.173824320192276,0,0.20778804455956,0.324482526135515,0.407357455401265,0,0,0,0.390361328888111,0.229902104433473,0.720248519221397,0.30140963567143,0.340182495756639,0.512454881139399,0.281105173679186,0,1.5089759505299,1.13463648100692,0.175951124163949,0.657587197282725,0.556094498451196,0.348252166522167,0,0.199034266818493,0,0,0,0,0,0.180062061461015,0.23674473558521,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0.420579897128254,1.13195073617213,0,0,0.213288250535234,0.696710015581316,0.128867461322093,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0.758671603812327,0.342745537829186,0,0.203651327845314,0.193952487167626,0.0701358198903186,0,0,0,0,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0,0.325929952884052,0.509235257325564,0.234690248288502,0.167506257441816,0,0,0.157635144106191,0.221464689648775,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0.222798674082394,0,0.404810701674894,0.584511715822624,0.395287777946524,0.642642632843614,0,0.178065603667255,0,0,0,0.242780636154981,0,0,0,0.307435147943927,0.258428293168221,0,0,0,0,0,5.7874732978144,3.06103859853227,5.95049945400671,7.71613326113732,12.5911565886014,14.4478742257677,7.0756078858912,11.8741330154694,0,0.21183207086382,0,0,0.161464426695906,0,0.119372344003136,0.164140899745061,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0.418176592028937,0,0,0,0,0,0,0,0.299033092087958,0.165458490457098,0,0,0.168956125490778,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0,1.37016503954128,0,0.675022500231806,0,0.453142408984205,0,0.415149390336707,1.19707462020309,0.512200817262403,1.21553358534147,0,0,0.44449345560323,0.824140228955577,0.320919209591815,0.252697211763798,0.25347929989024,0.377252682772152,0.187283014939765,0.448176066834085,0.287177344778066,0.952587382566147,0,0.192909220463705,0.412085900803307,0.294397840268795,0.342869252385415,0.177475806159338,0,0,0.0941093804153306,0.423073039458382,0.548783918618318,0,0.407412341537585,0,0,0.0985044823755635,0,0.309873682371932,0,0.749431733813838,0,0.214871054048298,0.382576664137687,0,0.231867835620421 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0.139986421625363,0,0,0,0,0,0,0,7.89034197352431,11.6378015439847,6.33831403506179,0,0,0,0,0,1.19840044207362,2.30530983192933,3.7328260431052,7.83034442323806,3.78584930432488,1.14260393761521,2.20868540951614,2.69479758272899,4.79227355091182,4.5960939330501,0,0.893811366596314,0.46081959976873,7.78129097608144,14.0890971147711,8.33461392890816,1.3959149950069,1.12552522006336,1.37518422999129,3.24091444021034,2.42031857358475,2.42319279572891,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0.346970653532272,0,0,0.150722640552623,0,0,0.494389935468748,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,0.457500602818626,2.63874139437015,0.173824320192276,0,0.20778804455956,0.324482526135515,0.407357455401265,0,0,0,0.390361328888111,0.229902104433473,0.720248519221397,0.30140963567143,0.340182495756639,0.512454881139399,0.281105173679186,0,1.5089759505299,1.13463648100692,0.175951124163949,0.657587197282725,0.556094498451196,0.348252166522167,0,0.199034266818493,0,0,0,0,0,0.180062061461015,0.23674473558521,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0.420579897128254,1.13195073617213,0,0,0.213288250535234,0.696710015581316,0.128867461322093,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0.758671603812327,0.342745537829186,0,0.203651327845314,0.193952487167626,0.0701358198903186,0,0,0,0,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0,0.325929952884052,0.509235257325564,0.234690248288502,0.167506257441816,0,0,0.157635144106191,0.221464689648775,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0.222798674082394,0,0.404810701674894,0.584511715822624,0.395287777946524,0.642642632843614,0,0.178065603667255,0,0,0,0.242780636154981,0,0,0,0.307435147943927,0.258428293168221,0,0,0,0,0,5.7874732978144,3.06103859853227,5.95049945400671,7.71613326113732,12.5911565886014,14.4478742257677,7.0756078858912,11.8741330154694,0,0.21183207086382,0,0,0.161464426695906,0,0.119372344003136,0.164140899745061,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0.418176592028937,0,0,0,0,0,0,0,0.299033092087958,0.165458490457098,0,0,0.168956125490778,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0,1.37016503954128,0,0.675022500231806,0,0.453142408984205,0,0.415149390336707,1.19707462020309,0.512200817262403,1.21553358534147,0,0,0.44449345560323,0.824140228955577,0.320919209591815,0.252697211763798,0.25347929989024,0.377252682772152,0.187283014939765,0.448176066834085,0.287177344778066,0.952587382566147,0,0.192909220463705,0.412085900803307,0.294397840268795,0.342869252385415,0.177475806159338,0,0,0.0941093804153306,0.423073039458382,0.548783918618318,0,0.407412341537585,0,0,0.0985044823755635,0,0.309873682371932,0,0.749431733813838,0,0.214871054048298,0.382576664137687,0,0.231867835620421 | ||
|short_description=p@chr2:157387508..157387519,+ | |||
}} | }} |
Latest revision as of 09:57, 4 August 2015
Short description: | p@chr2:157387508..157387519, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:157387508..157387519, + |
Coexpression cluster: | MCL_coexpression_mm9:470 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.61e-39 | 23 |
neuroblast (sensu Vertebrata) | 1.61e-39 | 23 |
neuron | 4.22e-26 | 33 |
neuronal stem cell | 4.22e-26 | 33 |
neuroblast | 4.22e-26 | 33 |
electrically signaling cell | 4.22e-26 | 33 |
neural cell | 3.26e-23 | 43 |
ectodermal cell | 1.44e-22 | 44 |
neurectodermal cell | 1.44e-22 | 44 |
electrically responsive cell | 2.35e-21 | 39 |
electrically active cell | 2.35e-21 | 39 |
neuron of cerebral cortex | 5.60e-15 | 6 |
embryonic cell | 2.75e-12 | 70 |
striatum neuron | 4.53e-09 | 3 |
granule cell | 6.88e-09 | 3 |
somatic stem cell | 2.65e-08 | 91 |
multi fate stem cell | 2.65e-08 | 91 |
hippocampal neuron | 3.47e-08 | 3 |
neuron of the ventral spinal cord | 7.56e-08 | 3 |
stem cell | 1.73e-07 | 97 |
neuron of the substantia nigra | 3.39e-07 | 3 |