FFCP PHASE1:Mm9::chr2:157387638..157387650,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=470|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:157387638..157387650,+|id=chr2:157387638..157387650,+|ontology_enrichment_celltype=CL:0000117!4.53e-17!23;CL:0000337!4.53e-17!23;CL:0000540!1.01e-13!33;CL:0000047!1.01e-13!33;CL:0000031!1.01e-13!33;CL:0000404!1.01e-13!33;CL:0000221!1.59e-11!44;CL:0000133!1.59e-11!44;CL:0002319!1.72e-11!43;CL:0000393!1.47e-09!39;CL:0000211!1.47e-09!39;CL:0000055!6.29e-08!50|ontology_enrichment_celltype_v019_2=CL:0000117,4.35e-25,23;CL:0000337,4.35e-25,23;CL:0000540,4.11e-15,33;CL:0000047,4.11e-15,33;CL:0000031,4.11e-15,33;CL:0000404,4.11e-15,33;CL:0002319,1.39e-14,43;CL:0000221,4.69e-14,44;CL:0000133,4.69e-14,44;CL:0000393,1.19e-11,39;CL:0000211,1.19e-11,39;CL:0002609,3.60e-08,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!7.86e-20!73;UBERON:0005743!7.86e-20!73;UBERON:0002346!1.02e-19!71;UBERON:0003075!1.02e-19!71;UBERON:0007284!1.02e-19!71;UBERON:0004121!1.96e-19!102;UBERON:0000924!1.96e-19!102;UBERON:0006601!1.96e-19!102;UBERON:0000073!1.36e-18!75;UBERON:0001016!1.36e-18!75;UBERON:0001049!3.28e-17!52;UBERON:0005068!3.28e-17!52;UBERON:0006241!3.28e-17!52;UBERON:0007135!3.28e-17!52;UBERON:0000033!7.18e-16!63;UBERON:0000955!1.46e-15!50;UBERON:0006238!1.46e-15!50;UBERON:0002616!2.29e-15!49;UBERON:0003056!7.51e-15!49;UBERON:0003080!2.12e-13!40;UBERON:0002780!7.39e-13!39;UBERON:0001890!7.39e-13!39;UBERON:0006240!7.39e-13!39;UBERON:0002020!5.50e-10!34;UBERON:0001894!6.44e-08!10;UBERON:0006222!6.44e-08!10;UBERON:0000007!2.15e-07!8;UBERON:0003296!2.15e-07!8;UBERON:0010133!2.15e-07!8;UBERON:0000153!2.84e-07!94;UBERON:0002791!4.57e-07!29;UBERON:0003528!4.57e-07!29;UBERON:0001893!4.57e-07!29;UBERON:0007811!9.34e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.33e-22,54;UBERON:0002346,1.02e-21,64;UBERON:0003075,1.02e-21,64;UBERON:0007284,1.02e-21,64;UBERON:0001049,8.29e-21,52;UBERON:0005068,8.29e-21,52;UBERON:0006241,8.29e-21,52;UBERON:0007135,8.29e-21,52;UBERON:0001017,4.03e-20,73;UBERON:0003056,5.63e-20,49;UBERON:0004121,1.01e-19,95;UBERON:0000924,1.01e-19,95;UBERON:0006601,1.01e-19,95;UBERON:0001016,3.16e-19,75;UBERON:0010371,1.71e-18,73;UBERON:0003080,1.37e-17,40;UBERON:0002780,9.54e-17,39;UBERON:0001890,9.54e-17,39;UBERON:0006240,9.54e-17,39;UBERON:0002616,1.85e-16,46;UBERON:0000955,6.62e-16,47;UBERON:0006238,6.62e-16,47;UBERON:0002020,3.02e-13,34;UBERON:0010314,4.71e-12,92;UBERON:0000007,4.40e-11,8;UBERON:0003296,4.40e-11,8;UBERON:0010133,4.40e-11,8;UBERON:0001894,1.87e-10,10;UBERON:0006222,1.87e-10,10;UBERON:0003528,8.88e-09,29;UBERON:0002791,8.88e-09,29;UBERON:0001893,8.88e-09,29;UBERON:0002420,4.54e-08,8;UBERON:0007245,4.54e-08,8;UBERON:0010009,4.54e-08,8;UBERON:0010011,4.54e-08,8;UBERON:0000454,4.54e-08,8;UBERON:0001948,4.45e-07,5;UBERON:0002315,4.45e-07,5|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,1.30815093828268,0,0,0,0,0,0,0,0,0,0,31.3590514332377,25.3915670050576,24.0855933332348,0,0,0,0,0,2.39680088414724,14.9845139075406,7.36196247390191,20.3858966880853,7.78202357000113,13.7112472513826,9.27647871996777,8.08439274818697,21.6610764501214,23.8996884518605,2.20231761998777,0.893811366596314,2.76491759861238,28.0917792865313,77.3985464876386,26.5665818983948,8.09630697104005,7.31591393041184,8.55670187550137,8.54422897873636,21.6404954814636,8.57437450796383,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0.29688427812965,0.867426633830679,0.608930956624282,0.230615497256059,0.150722640552623,0.705532242814229,0.628332956648377,1.23597483867187,0.433798070759735,0,0,0,0,0,0,0.41889341362691,0,0,0,0,2.09706895166752,0.457500602818626,6.15706325353036,0.173824320192276,0.255715457330331,2.0778804455956,0.648965052271031,0.305518091550949,0.124406970610093,0,0,0.390361328888111,2.06911893990126,3.78130472591233,1.50704817835715,1.02054748726992,1.5373646434182,1.3118241438362,0,2.80238390812695,2.26927296201383,1.40760899331159,0.876782929710299,0.278047249225598,0,0,0,0,0,0,1.24275463521301,0,0.180062061461015,0.473489471170421,0.196764231747404,0,0,0,0,0,0,0,0,0,0,1.05144974282064,5.45394445610208,0,0,1.2797295032114,0.696710015581316,0.77320476793256,0.403367049246685,0.889512175379481,0.190225626112559,0,0.164698954724011,0,0,0.19496408711912,0,0,0,1.13800740571849,0.456994050438915,0,0.407302655690628,0,0.0701358198903186,0.0632365371242573,0,0.156998727841375,0,0,0.500535317148282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,1.14075483509418,0.678980343100753,0.234690248288502,1.50755631697634,0.238043640886014,0.195133647857799,0.315270288212382,0,0.159454768657487,0,0.172684981865896,0,0,0,0,1.37968373152366,0.481651769963376,0.468846746368813,0,0,0.94652465824877,0,0.646270193198397,0.238968797952552,0.445597348164788,0.283076530788832,0,0.292255857911312,0,0.642642632843614,0.425820255624806,0.178065603667255,0.162886959353576,0,0,0,0.302323556964751,0.565815239267694,1.77181135728464,0.922305443831782,0,0,0.356497378384721,0,0,0,37.4483566329167,4.50152735078276,9.31382523235832,18.4329850127169,59.5863185038039,27.6471667283209,19.087686389846,37.4491887410957,0,0,0,0.16488625294148,0,0.0603129249281559,0,0,0,0.18542530201051,0,0.82554747185289,1.48155621895769,0.188368457004691,0,0,0,0,0,0,1.73984796469624,1.82987520414164,0.324016022465404,0,0,0.134864346384821,0,0,0,0,0,0.299033092087958,0.165458490457098,0,0.387479470433193,0,0.117357238645754,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,1.12950368523413,0,0,0.68741272937475,0,0,2.02506750069542,0.900642406448441,0.906284817968409,0,1.66059756134683,1.19707462020309,2.56100408631201,1.45864030240976,0.838452650511929,0.919217542250071,1.77797382241292,1.85431551515005,0.64183841918363,1.01078884705519,0.50695859978048,1.32038438970253,2.06011316433741,1.85672941974121,1.14870937911227,1.42888107384922,0.927074607558844,1.54327376370964,0.824171801606613,1.91358596174717,0.685738504770831,0.354951612318675,1.90748951957857,0.290692833264657,0.658765662907314,0.676916863133412,1.09756783723664,1.05227884575137,1.90125759384206,2.24456908663095,1.42362021749009,1.18205378850676,0.818462086339379,0.464810523557898,0.771626443924566,1.74867404556562,0.701794825336225,0.644613162144895,0.382576664137687,0.220591419119515,0.231867835620421|short_description=p@chr2:157387638..157387650,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=470 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:157387638..157387650,+ | |||
|description=CAGE_peak_at_chr2:157387638..157387650,+ | |||
|id=chr2:157387638..157387650,+ | |||
|ontology_enrichment_celltype=CL:0000117!4.53e-17!23;CL:0000337!4.53e-17!23;CL:0000540!1.01e-13!33;CL:0000047!1.01e-13!33;CL:0000031!1.01e-13!33;CL:0000404!1.01e-13!33;CL:0000221!1.59e-11!44;CL:0000133!1.59e-11!44;CL:0002319!1.72e-11!43;CL:0000393!1.47e-09!39;CL:0000211!1.47e-09!39;CL:0000055!6.29e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.35e-25,23;CL:0000337,4.35e-25,23;CL:0000540,4.11e-15,33;CL:0000047,4.11e-15,33;CL:0000031,4.11e-15,33;CL:0000404,4.11e-15,33;CL:0002319,1.39e-14,43;CL:0000221,4.69e-14,44;CL:0000133,4.69e-14,44;CL:0000393,1.19e-11,39;CL:0000211,1.19e-11,39;CL:0002609,3.60e-08,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.86e-20!73;UBERON:0005743!7.86e-20!73;UBERON:0002346!1.02e-19!71;UBERON:0003075!1.02e-19!71;UBERON:0007284!1.02e-19!71;UBERON:0004121!1.96e-19!102;UBERON:0000924!1.96e-19!102;UBERON:0006601!1.96e-19!102;UBERON:0000073!1.36e-18!75;UBERON:0001016!1.36e-18!75;UBERON:0001049!3.28e-17!52;UBERON:0005068!3.28e-17!52;UBERON:0006241!3.28e-17!52;UBERON:0007135!3.28e-17!52;UBERON:0000033!7.18e-16!63;UBERON:0000955!1.46e-15!50;UBERON:0006238!1.46e-15!50;UBERON:0002616!2.29e-15!49;UBERON:0003056!7.51e-15!49;UBERON:0003080!2.12e-13!40;UBERON:0002780!7.39e-13!39;UBERON:0001890!7.39e-13!39;UBERON:0006240!7.39e-13!39;UBERON:0002020!5.50e-10!34;UBERON:0001894!6.44e-08!10;UBERON:0006222!6.44e-08!10;UBERON:0000007!2.15e-07!8;UBERON:0003296!2.15e-07!8;UBERON:0010133!2.15e-07!8;UBERON:0000153!2.84e-07!94;UBERON:0002791!4.57e-07!29;UBERON:0003528!4.57e-07!29;UBERON:0001893!4.57e-07!29;UBERON:0007811!9.34e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.33e-22,54;UBERON:0002346,1.02e-21,64;UBERON:0003075,1.02e-21,64;UBERON:0007284,1.02e-21,64;UBERON:0001049,8.29e-21,52;UBERON:0005068,8.29e-21,52;UBERON:0006241,8.29e-21,52;UBERON:0007135,8.29e-21,52;UBERON:0001017,4.03e-20,73;UBERON:0003056,5.63e-20,49;UBERON:0004121,1.01e-19,95;UBERON:0000924,1.01e-19,95;UBERON:0006601,1.01e-19,95;UBERON:0001016,3.16e-19,75;UBERON:0010371,1.71e-18,73;UBERON:0003080,1.37e-17,40;UBERON:0002780,9.54e-17,39;UBERON:0001890,9.54e-17,39;UBERON:0006240,9.54e-17,39;UBERON:0002616,1.85e-16,46;UBERON:0000955,6.62e-16,47;UBERON:0006238,6.62e-16,47;UBERON:0002020,3.02e-13,34;UBERON:0010314,4.71e-12,92;UBERON:0000007,4.40e-11,8;UBERON:0003296,4.40e-11,8;UBERON:0010133,4.40e-11,8;UBERON:0001894,1.87e-10,10;UBERON:0006222,1.87e-10,10;UBERON:0003528,8.88e-09,29;UBERON:0002791,8.88e-09,29;UBERON:0001893,8.88e-09,29;UBERON:0002420,4.54e-08,8;UBERON:0007245,4.54e-08,8;UBERON:0010009,4.54e-08,8;UBERON:0010011,4.54e-08,8;UBERON:0000454,4.54e-08,8;UBERON:0001948,4.45e-07,5;UBERON:0002315,4.45e-07,5 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,1.30815093828268,0,0,0,0,0,0,0,0,0,0,31.3590514332377,25.3915670050576,24.0855933332348,0,0,0,0,0,2.39680088414724,14.9845139075406,7.36196247390191,20.3858966880853,7.78202357000113,13.7112472513826,9.27647871996777,8.08439274818697,21.6610764501214,23.8996884518605,2.20231761998777,0.893811366596314,2.76491759861238,28.0917792865313,77.3985464876386,26.5665818983948,8.09630697104005,7.31591393041184,8.55670187550137,8.54422897873636,21.6404954814636,8.57437450796383,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0.29688427812965,0.867426633830679,0.608930956624282,0.230615497256059,0.150722640552623,0.705532242814229,0.628332956648377,1.23597483867187,0.433798070759735,0,0,0,0,0,0,0.41889341362691,0,0,0,0,2.09706895166752,0.457500602818626,6.15706325353036,0.173824320192276,0.255715457330331,2.0778804455956,0.648965052271031,0.305518091550949,0.124406970610093,0,0,0.390361328888111,2.06911893990126,3.78130472591233,1.50704817835715,1.02054748726992,1.5373646434182,1.3118241438362,0,2.80238390812695,2.26927296201383,1.40760899331159,0.876782929710299,0.278047249225598,0,0,0,0,0,0,1.24275463521301,0,0.180062061461015,0.473489471170421,0.196764231747404,0,0,0,0,0,0,0,0,0,0,1.05144974282064,5.45394445610208,0,0,1.2797295032114,0.696710015581316,0.77320476793256,0.403367049246685,0.889512175379481,0.190225626112559,0,0.164698954724011,0,0,0.19496408711912,0,0,0,1.13800740571849,0.456994050438915,0,0.407302655690628,0,0.0701358198903186,0.0632365371242573,0,0.156998727841375,0,0,0.500535317148282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,1.14075483509418,0.678980343100753,0.234690248288502,1.50755631697634,0.238043640886014,0.195133647857799,0.315270288212382,0,0.159454768657487,0,0.172684981865896,0,0,0,0,1.37968373152366,0.481651769963376,0.468846746368813,0,0,0.94652465824877,0,0.646270193198397,0.238968797952552,0.445597348164788,0.283076530788832,0,0.292255857911312,0,0.642642632843614,0.425820255624806,0.178065603667255,0.162886959353576,0,0,0,0.302323556964751,0.565815239267694,1.77181135728464,0.922305443831782,0,0,0.356497378384721,0,0,0,37.4483566329167,4.50152735078276,9.31382523235832,18.4329850127169,59.5863185038039,27.6471667283209,19.087686389846,37.4491887410957,0,0,0,0.16488625294148,0,0.0603129249281559,0,0,0,0.18542530201051,0,0.82554747185289,1.48155621895769,0.188368457004691,0,0,0,0,0,0,1.73984796469624,1.82987520414164,0.324016022465404,0,0,0.134864346384821,0,0,0,0,0,0.299033092087958,0.165458490457098,0,0.387479470433193,0,0.117357238645754,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,1.12950368523413,0,0,0.68741272937475,0,0,2.02506750069542,0.900642406448441,0.906284817968409,0,1.66059756134683,1.19707462020309,2.56100408631201,1.45864030240976,0.838452650511929,0.919217542250071,1.77797382241292,1.85431551515005,0.64183841918363,1.01078884705519,0.50695859978048,1.32038438970253,2.06011316433741,1.85672941974121,1.14870937911227,1.42888107384922,0.927074607558844,1.54327376370964,0.824171801606613,1.91358596174717,0.685738504770831,0.354951612318675,1.90748951957857,0.290692833264657,0.658765662907314,0.676916863133412,1.09756783723664,1.05227884575137,1.90125759384206,2.24456908663095,1.42362021749009,1.18205378850676,0.818462086339379,0.464810523557898,0.771626443924566,1.74867404556562,0.701794825336225,0.644613162144895,0.382576664137687,0.220591419119515,0.231867835620421 | |||
|short_description=p@chr2:157387638..157387650,+ | |||
}} |
Latest revision as of 09:58, 4 August 2015
Short description: | p@chr2:157387638..157387650, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:157387638..157387650, + |
Coexpression cluster: | MCL_coexpression_mm9:470 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.35e-25 | 23 |
neuroblast (sensu Vertebrata) | 4.35e-25 | 23 |
neuron | 4.11e-15 | 33 |
neuronal stem cell | 4.11e-15 | 33 |
neuroblast | 4.11e-15 | 33 |
electrically signaling cell | 4.11e-15 | 33 |
neural cell | 1.39e-14 | 43 |
ectodermal cell | 4.69e-14 | 44 |
neurectodermal cell | 4.69e-14 | 44 |
electrically responsive cell | 1.19e-11 | 39 |
electrically active cell | 1.19e-11 | 39 |
neuron of cerebral cortex | 3.60e-08 | 6 |