FFCP PHASE1:Mm9::chr17:26641272..26641285,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:26641272..26641285,-|id=chr17:26641272..26641285,-|ontology_enrichment_celltype=CL:0000223!4.69e-07!20;CL:0000355!4.94e-07!9;CL:0000066!7.27e-07!25|ontology_enrichment_celltype_v019_2=CL:0000182,5.99e-15,5;CL:0000355,1.55e-14,9;CL:0002494,1.07e-11,3;CL:0000737,1.07e-11,3;CL:0000746,1.07e-11,3;CL:0000513,1.07e-11,3;CL:0000222,5.82e-11,7;CL:0000213,2.52e-09,1;CL:0002078,2.52e-09,1;CL:0000115,2.52e-09,1;CL:0002262,2.52e-09,1;CL:1000398,2.52e-09,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,1.55e-11,3;DOID:4045,1.55e-11,3|ontology_enrichment_uberon=UBERON:0000383!6.81e-08!10;UBERON:0001134!4.94e-07!9;UBERON:0002036!4.94e-07!9;UBERON:0002385!4.94e-07!9;UBERON:0000486!4.94e-07!9;UBERON:0001015!4.94e-07!9;UBERON:0004290!4.94e-07!9;UBERON:0003082!4.94e-07!9;UBERON:0002329!8.53e-07!11;UBERON:0003077!8.53e-07!11;UBERON:0003059!8.53e-07!11;UBERON:0007282!8.53e-07!11;UBERON:0009618!8.53e-07!11;UBERON:0007285!8.53e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.55e-14,9;UBERON:0002036,1.55e-14,9;UBERON:0002385,1.55e-14,9;UBERON:0000486,1.55e-14,9;UBERON:0007503,1.55e-14,9;UBERON:0001015,1.55e-14,9;UBERON:0002329,1.55e-14,9;UBERON:0003082,1.55e-14,9;UBERON:0003059,1.55e-14,9;UBERON:0007282,1.55e-14,9;UBERON:0004290,1.55e-14,9;UBERON:0009618,1.55e-14,9;UBERON:0000383,4.06e-13,10;UBERON:0007524,5.89e-12,11;UBERON:0003077,5.89e-12,11;UBERON:0007285,5.89e-12,11;UBERON:0002394,2.52e-09,1;UBERON:0001281,2.52e-09,1;UBERON:0000353,2.52e-09,1;UBERON:0003497,2.52e-09,1;UBERON:0003909,2.52e-09,1;UBERON:0003928,2.52e-09,1;UBERON:0003835,2.52e-09,1;UBERON:0003513,2.52e-09,1;UBERON:0001280,2.52e-09,1;UBERON:0004647,2.52e-09,1;UBERON:0002294,2.52e-09,1;UBERON:0001173,2.52e-09,1;UBERON:0004912,2.52e-09,1;UBERON:0005171,2.52e-09,1;UBERON:0005256,2.49e-08,45|phase1_expression=0.320297694209588,0.697950815278722,0.454999239389536,0,0,0.33575854382378,0,0.258246646883153,0.422366166455,0,0,0.0797721589953364,0.342401459862411,0,0,0.202475267389826,0,0.157731082679119,0,0,0.0850432901510698,0,0,0,0,0.57423196411502,0,0,0,0,0,0,0,0,0.288851619751275,0,0.612508068787107,1.25559489221072,2.3440060335714,0.523523743973798,22.9410280332096,11.6117732442936,0.485510353031154,0,0.101376931219515,0.183546752161682,0,0,0,0,0,0,0,0.725362142011344,0,0.771778308107841,1.43266719969378,2.57836046138721,0.202316460859598,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0.186399445825301,0.075726193333184,0.453429360640713,2.02905142091174,0.860423876981386,2.03991400112325,0.539703191637817,1.29955283489534,0.448026887097336,0,0,0,0,0,0,0,0,0.432982082022428,0.506719730950197,1.51657333504435,0,0,0.148442139064825,0,0,0,0.150722640552623,0,0,0.247194967734374,0,0,0.485300549842228,0,0,0,0.292780797011547,0,0,0.11981512450592,0,0.254140454146129,0.149790639404823,0,0,0,0.255715457330331,0.20778804455956,0,0.101839363850316,0.124406970610093,0,0,0,0.229902104433473,0,0,0,0.12811372028485,0.0937017245597288,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0.284163499395593,0,0.234526059981096,0,0.23674473558521,0,0,0,0,0.116765342367169,0.16455984991348,0,0.162137619091711,0.146199987425332,0,0.134206418760372,0,0.102904612379284,0,0,0,0.464473343720877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0.241177159752417,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0.234690248288502,0,0,0.390267295715598,0,0.221464689648775,0.159454768657487,0.327726629431476,0.172684981865896,0.289298117163023,0,0,0,0,0,0,0,0.504941854408746,0,0,0.215423397732799,0.238968797952552,0,0,0,0,0.395287777946524,0,0,0.178065603667255,0,0.164970122972535,0,0,0,0,0,0,0,0.363533729477506,0,0,0,1.03135543248187,0,0,0,0,0,0,0,0.304464949114599,0.469343416127421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509935289981566,0.559805809294632,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0.129920822977795,0,0,0.120195449519969,0,0,0,0,0.0974578807397524,0.0962118416403295,0.116876902181569,0,0,0.0897138566094757,0,0,0,0,0,0,0,0,0,0,0.685082519770642,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0.252697211763798,0,0.188626341386076,0,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0|short_description=p@chr17:26641272..26641285,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr17:26641272..26641285,- | |||
|description=CAGE_peak_at_chr17:26641272..26641285,- | |||
|id=chr17:26641272..26641285,- | |||
|ontology_enrichment_celltype=CL:0000223!4.69e-07!20;CL:0000355!4.94e-07!9;CL:0000066!7.27e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.99e-15,5;CL:0000355,1.55e-14,9;CL:0002494,1.07e-11,3;CL:0000737,1.07e-11,3;CL:0000746,1.07e-11,3;CL:0000513,1.07e-11,3;CL:0000222,5.82e-11,7;CL:0000213,2.52e-09,1;CL:0002078,2.52e-09,1;CL:0000115,2.52e-09,1;CL:0002262,2.52e-09,1;CL:1000398,2.52e-09,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.55e-11,3;DOID:4045,1.55e-11,3 | |||
|ontology_enrichment_uberon=UBERON:0000383!6.81e-08!10;UBERON:0001134!4.94e-07!9;UBERON:0002036!4.94e-07!9;UBERON:0002385!4.94e-07!9;UBERON:0000486!4.94e-07!9;UBERON:0001015!4.94e-07!9;UBERON:0004290!4.94e-07!9;UBERON:0003082!4.94e-07!9;UBERON:0002329!8.53e-07!11;UBERON:0003077!8.53e-07!11;UBERON:0003059!8.53e-07!11;UBERON:0007282!8.53e-07!11;UBERON:0009618!8.53e-07!11;UBERON:0007285!8.53e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.55e-14,9;UBERON:0002036,1.55e-14,9;UBERON:0002385,1.55e-14,9;UBERON:0000486,1.55e-14,9;UBERON:0007503,1.55e-14,9;UBERON:0001015,1.55e-14,9;UBERON:0002329,1.55e-14,9;UBERON:0003082,1.55e-14,9;UBERON:0003059,1.55e-14,9;UBERON:0007282,1.55e-14,9;UBERON:0004290,1.55e-14,9;UBERON:0009618,1.55e-14,9;UBERON:0000383,4.06e-13,10;UBERON:0007524,5.89e-12,11;UBERON:0003077,5.89e-12,11;UBERON:0007285,5.89e-12,11;UBERON:0002394,2.52e-09,1;UBERON:0001281,2.52e-09,1;UBERON:0000353,2.52e-09,1;UBERON:0003497,2.52e-09,1;UBERON:0003909,2.52e-09,1;UBERON:0003928,2.52e-09,1;UBERON:0003835,2.52e-09,1;UBERON:0003513,2.52e-09,1;UBERON:0001280,2.52e-09,1;UBERON:0004647,2.52e-09,1;UBERON:0002294,2.52e-09,1;UBERON:0001173,2.52e-09,1;UBERON:0004912,2.52e-09,1;UBERON:0005171,2.52e-09,1;UBERON:0005256,2.49e-08,45 | |||
|phase1_expression=0.320297694209588,0.697950815278722,0.454999239389536,0,0,0.33575854382378,0,0.258246646883153,0.422366166455,0,0,0.0797721589953364,0.342401459862411,0,0,0.202475267389826,0,0.157731082679119,0,0,0.0850432901510698,0,0,0,0,0.57423196411502,0,0,0,0,0,0,0,0,0.288851619751275,0,0.612508068787107,1.25559489221072,2.3440060335714,0.523523743973798,22.9410280332096,11.6117732442936,0.485510353031154,0,0.101376931219515,0.183546752161682,0,0,0,0,0,0,0,0.725362142011344,0,0.771778308107841,1.43266719969378,2.57836046138721,0.202316460859598,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0.186399445825301,0.075726193333184,0.453429360640713,2.02905142091174,0.860423876981386,2.03991400112325,0.539703191637817,1.29955283489534,0.448026887097336,0,0,0,0,0,0,0,0,0.432982082022428,0.506719730950197,1.51657333504435,0,0,0.148442139064825,0,0,0,0.150722640552623,0,0,0.247194967734374,0,0,0.485300549842228,0,0,0,0.292780797011547,0,0,0.11981512450592,0,0.254140454146129,0.149790639404823,0,0,0,0.255715457330331,0.20778804455956,0,0.101839363850316,0.124406970610093,0,0,0,0.229902104433473,0,0,0,0.12811372028485,0.0937017245597288,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0.284163499395593,0,0.234526059981096,0,0.23674473558521,0,0,0,0,0.116765342367169,0.16455984991348,0,0.162137619091711,0.146199987425332,0,0.134206418760372,0,0.102904612379284,0,0,0,0.464473343720877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0.241177159752417,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0.234690248288502,0,0,0.390267295715598,0,0.221464689648775,0.159454768657487,0.327726629431476,0.172684981865896,0.289298117163023,0,0,0,0,0,0,0,0.504941854408746,0,0,0.215423397732799,0.238968797952552,0,0,0,0,0.395287777946524,0,0,0.178065603667255,0,0.164970122972535,0,0,0,0,0,0,0,0.363533729477506,0,0,0,1.03135543248187,0,0,0,0,0,0,0,0.304464949114599,0.469343416127421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509935289981566,0.559805809294632,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0.129920822977795,0,0,0.120195449519969,0,0,0,0,0.0974578807397524,0.0962118416403295,0.116876902181569,0,0,0.0897138566094757,0,0,0,0,0,0,0,0,0,0,0.685082519770642,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0.252697211763798,0,0.188626341386076,0,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0 | |||
|short_description=p@chr17:26641272..26641285,- | |||
}} |
Latest revision as of 11:43, 4 August 2015
Short description: | p@chr17:26641272..26641285, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:26641272..26641285, - |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.99e-15 | 5 |
multi-potent skeletal muscle stem cell | 1.55e-14 | 9 |
cardiocyte | 1.07e-11 | 3 |
striated muscle cell | 1.07e-11 | 3 |
cardiac muscle cell | 1.07e-11 | 3 |
cardiac muscle myoblast | 1.07e-11 | 3 |
mesodermal cell | 5.82e-11 | 7 |
lining cell | 2.52e-09 | 1 |
meso-epithelial cell | 2.52e-09 | 1 |
endothelial cell | 2.52e-09 | 1 |
endothelial cell of sinusoid | 2.52e-09 | 1 |
endothelial cell of hepatic sinusoid | 2.52e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 1.55e-14 | 9 |
striated muscle tissue | 1.55e-14 | 9 |
muscle tissue | 1.55e-14 | 9 |
multilaminar epithelium | 1.55e-14 | 9 |
epithelial vesicle | 1.55e-14 | 9 |
musculature | 1.55e-14 | 9 |
somite | 1.55e-14 | 9 |
myotome | 1.55e-14 | 9 |
presomitic mesoderm | 1.55e-14 | 9 |
presumptive segmental plate | 1.55e-14 | 9 |
dermomyotome | 1.55e-14 | 9 |
trunk paraxial mesoderm | 1.55e-14 | 9 |
musculature of body | 4.06e-13 | 10 |
dense mesenchyme tissue | 5.89e-12 | 11 |
paraxial mesoderm | 5.89e-12 | 11 |
presumptive paraxial mesoderm | 5.89e-12 | 11 |
bile duct | 2.52e-09 | 1 |
hepatic sinusoid | 2.52e-09 | 1 |
parenchyma | 2.52e-09 | 1 |
abdomen blood vessel | 2.52e-09 | 1 |
sinusoid | 2.52e-09 | 1 |
digestive system duct | 2.52e-09 | 1 |
abdominal segment blood vessel | 2.52e-09 | 1 |
trunk blood vessel | 2.52e-09 | 1 |
liver parenchyma | 2.52e-09 | 1 |
liver lobule | 2.52e-09 | 1 |
biliary system | 2.52e-09 | 1 |
biliary tree | 2.52e-09 | 1 |
biliary bud | 2.52e-09 | 1 |
hepatic duct | 2.52e-09 | 1 |
trunk mesenchyme | 2.49e-08 | 45 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.55e-11 | 3 |
muscle cancer | 1.55e-11 | 3 |