FFCP PHASE1:Mm9::chr10:59568977..59569011,+: Difference between revisions
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{{FFCP|EntrezGene=94214|HGNC=|MCL_coexpression_id=1|UniProt=Q9ER58|association_with_transcript=0bp_to_NM_052994,uc007fek.1,uc007fel.1_5end|description=CAGE_peak_1_at_Spock2_5end|id=chr10:59568977..59569011,+|ontology_enrichment_celltype=CL:0000117!3.30e-12!23;CL:0000337!3.30e-12!23;CL:0000540!3.50e-09!33;CL:0000047!3.50e-09!33;CL:0000031!3.50e-09!33;CL:0000404!3.50e-09!33|ontology_enrichment_celltype_v019_2=CL:0000117,3.58e-13,23;CL:0000337,3.58e-13,23;CL:0000540,4.60e-09,33;CL:0000047,4.60e-09,33;CL:0000031,4.60e-09,33;CL:0000404,4.60e-09,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!7.65e-23!71;UBERON:0003075!7.65e-23!71;UBERON:0007284!7.65e-23!71;UBERON:0001049!5.01e-22!52;UBERON:0005068!5.01e-22!52;UBERON:0006241!5.01e-22!52;UBERON:0007135!5.01e-22!52;UBERON:0000955!4.26e-21!50;UBERON:0006238!4.26e-21!50;UBERON:0000033!9.47e-21!63;UBERON:0002616!1.59e-20!49;UBERON:0001017!2.63e-20!73;UBERON:0005743!2.63e-20!73;UBERON:0000073!5.24e-20!75;UBERON:0001016!5.24e-20!75;UBERON:0004121!2.04e-19!102;UBERON:0000924!2.04e-19!102;UBERON:0006601!2.04e-19!102;UBERON:0003056!2.46e-18!49;UBERON:0003080!1.50e-17!40;UBERON:0002780!6.44e-17!39;UBERON:0001890!6.44e-17!39;UBERON:0006240!6.44e-17!39;UBERON:0002020!1.64e-16!34;UBERON:0002791!8.00e-14!29;UBERON:0003528!8.00e-14!29;UBERON:0001893!8.00e-14!29;UBERON:0007811!1.00e-11!86;UBERON:0000153!1.39e-10!94;UBERON:0000956!2.00e-09!21;UBERON:0001869!2.00e-09!21;UBERON:0000203!2.00e-09!21;UBERON:0002021!5.10e-08!10;UBERON:0000411!5.10e-08!10;UBERON:0001950!5.10e-08!10;UBERON:0002619!6.59e-08!17|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.06e-25,54;UBERON:0001049,3.56e-24,52;UBERON:0005068,3.56e-24,52;UBERON:0006241,3.56e-24,52;UBERON:0007135,3.56e-24,52;UBERON:0002346,1.07e-23,64;UBERON:0003075,1.07e-23,64;UBERON:0007284,1.07e-23,64;UBERON:0001017,1.86e-21,73;UBERON:0000955,5.12e-21,47;UBERON:0006238,5.12e-21,47;UBERON:0001016,9.85e-21,75;UBERON:0010371,1.79e-20,73;UBERON:0002616,2.10e-20,46;UBERON:0003056,1.86e-19,49;UBERON:0003080,5.24e-19,40;UBERON:0002780,2.57e-18,39;UBERON:0001890,2.57e-18,39;UBERON:0006240,2.57e-18,39;UBERON:0004121,2.92e-18,95;UBERON:0000924,2.92e-18,95;UBERON:0006601,2.92e-18,95;UBERON:0002020,7.12e-18,34;UBERON:0003528,6.10e-15,29;UBERON:0002791,6.10e-15,29;UBERON:0001893,6.10e-15,29;UBERON:0010314,1.06e-14,92;UBERON:0000956,3.82e-10,21;UBERON:0001869,3.82e-10,21;UBERON:0000203,3.82e-10,21;UBERON:0002021,1.32e-08,10;UBERON:0000411,1.32e-08,10;UBERON:0001950,1.32e-08,10;UBERON:0002619,1.72e-08,17;UBERON:0000025,7.68e-07,114;UBERON:0004111,9.38e-07,122|phase1_expression=5.2849119544582,0,0,0,0,0.33575854382378,0.467225281191051,3.09895976259783,0.140788722151667,0.234064526321993,0,0.0797721589953364,0.171200729931206,0,0,0,0,0,0.137114433605739,0,23.216818211242,0.297872853602656,0.261199789138935,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,0,0.439372365468944,0,0.279972843250725,0,0.167782606057736,2.90144856804538,0.672187598284928,0,0.286533439938757,1.03134418455488,36.214646493868,44.9642332381228,37.3960528068646,0.338844532069132,0,0,0,0,0,0.384218305321555,8.08778976006126,10.8004750665353,6.52007380189284,69.6988401945281,66.7022993673873,17.5161842877384,16.3895755441184,16.5459381589804,126.633263149297,99.4684363683612,99.5370335500458,43.6543612386942,48.6714263964819,47.9240300912219,89.8969256784447,98.483456755544,106.041983957106,65.9968031461016,56.5215572772439,44.5494675522468,0.908714319998209,2.56943304363071,2.31891590961342,0.860423876981386,0,0,0,0,4.91555470461132,0,0,0,3.52108549441701,0,0,0,0,0,0,3.76806803072898,0.776813650941515,8.31275978763019,1.21439728736295,3.34912026143355,2.99800146432876,3.91878865436819,6.70255630673517,3.51866455723091,2.22475470960936,2.16899035379867,0,0.323533699894818,0.662524555381181,1.45462575940567,3.72783522436244,82.8569655542678,119.594069590483,1.78819938646014,0,0,0,109.347166765521,123.525162761029,73.5077959860257,145.490956000935,137.830631501048,103.89402227978,143.421276551898,7.33243419722277,3.85661608891288,3.0326731012041,4.41927897361595,0.780722657776222,3.90833577536904,3.06105620669094,4.37043971723574,6.53150391852747,5.63700369253339,5.71580519814346,13.9699820199068,0.215567992932842,0.945530400839096,0.879755620819744,0.657587197282725,2.22437799380478,1.0447564995665,1.85203922767149,0.796137067273973,0,0,0,0,0.469052119962192,0.36012412292203,0.23674473558521,0.590292695242212,0.308534225774757,0.465067889500816,0.268273401399619,0.934122738937356,0.493679549740441,0.656669856316381,1.4592385718254,0.877199924551994,1.97595103761946,1.8788898626452,95.4716366481138,33.8556174727846,0,1.05780226665418,0.639864751605702,0.232236671860439,0.257734922644187,0.80673409849337,1.11189021922435,1.90225626112559,1.42358718463353,2.30578536613615,2.26201687920243,1.59165177632921,0.19496408711912,0.898819408654221,0.216138049874694,0.796565093017469,3.79335801906163,3.7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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:94214 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9ER58 | |||
|association_with_transcript=0bp_to_NM_052994,uc007fek.1,uc007fel.1_5end | |||
|cluster_id=chr10:59568977..59569011,+ | |||
|description=CAGE_peak_1_at_Spock2_5end | |||
|id=chr10:59568977..59569011,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.30e-12!23;CL:0000337!3.30e-12!23;CL:0000540!3.50e-09!33;CL:0000047!3.50e-09!33;CL:0000031!3.50e-09!33;CL:0000404!3.50e-09!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.58e-13,23;CL:0000337,3.58e-13,23;CL:0000540,4.60e-09,33;CL:0000047,4.60e-09,33;CL:0000031,4.60e-09,33;CL:0000404,4.60e-09,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!7.65e-23!71;UBERON:0003075!7.65e-23!71;UBERON:0007284!7.65e-23!71;UBERON:0001049!5.01e-22!52;UBERON:0005068!5.01e-22!52;UBERON:0006241!5.01e-22!52;UBERON:0007135!5.01e-22!52;UBERON:0000955!4.26e-21!50;UBERON:0006238!4.26e-21!50;UBERON:0000033!9.47e-21!63;UBERON:0002616!1.59e-20!49;UBERON:0001017!2.63e-20!73;UBERON:0005743!2.63e-20!73;UBERON:0000073!5.24e-20!75;UBERON:0001016!5.24e-20!75;UBERON:0004121!2.04e-19!102;UBERON:0000924!2.04e-19!102;UBERON:0006601!2.04e-19!102;UBERON:0003056!2.46e-18!49;UBERON:0003080!1.50e-17!40;UBERON:0002780!6.44e-17!39;UBERON:0001890!6.44e-17!39;UBERON:0006240!6.44e-17!39;UBERON:0002020!1.64e-16!34;UBERON:0002791!8.00e-14!29;UBERON:0003528!8.00e-14!29;UBERON:0001893!8.00e-14!29;UBERON:0007811!1.00e-11!86;UBERON:0000153!1.39e-10!94;UBERON:0000956!2.00e-09!21;UBERON:0001869!2.00e-09!21;UBERON:0000203!2.00e-09!21;UBERON:0002021!5.10e-08!10;UBERON:0000411!5.10e-08!10;UBERON:0001950!5.10e-08!10;UBERON:0002619!6.59e-08!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.06e-25,54;UBERON:0001049,3.56e-24,52;UBERON:0005068,3.56e-24,52;UBERON:0006241,3.56e-24,52;UBERON:0007135,3.56e-24,52;UBERON:0002346,1.07e-23,64;UBERON:0003075,1.07e-23,64;UBERON:0007284,1.07e-23,64;UBERON:0001017,1.86e-21,73;UBERON:0000955,5.12e-21,47;UBERON:0006238,5.12e-21,47;UBERON:0001016,9.85e-21,75;UBERON:0010371,1.79e-20,73;UBERON:0002616,2.10e-20,46;UBERON:0003056,1.86e-19,49;UBERON:0003080,5.24e-19,40;UBERON:0002780,2.57e-18,39;UBERON:0001890,2.57e-18,39;UBERON:0006240,2.57e-18,39;UBERON:0004121,2.92e-18,95;UBERON:0000924,2.92e-18,95;UBERON:0006601,2.92e-18,95;UBERON:0002020,7.12e-18,34;UBERON:0003528,6.10e-15,29;UBERON:0002791,6.10e-15,29;UBERON:0001893,6.10e-15,29;UBERON:0010314,1.06e-14,92;UBERON:0000956,3.82e-10,21;UBERON:0001869,3.82e-10,21;UBERON:0000203,3.82e-10,21;UBERON:0002021,1.32e-08,10;UBERON:0000411,1.32e-08,10;UBERON:0001950,1.32e-08,10;UBERON:0002619,1.72e-08,17;UBERON:0000025,7.68e-07,114;UBERON:0004111,9.38e-07,122 | |||
|phase1_expression=5.2849119544582,0,0,0,0,0.33575854382378,0.467225281191051,3.09895976259783,0.140788722151667,0.234064526321993,0,0.0797721589953364,0.171200729931206,0,0,0,0,0,0.137114433605739,0,23.216818211242,0.297872853602656,0.261199789138935,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,0,0.439372365468944,0,0.279972843250725,0,0.167782606057736,2.90144856804538,0.672187598284928,0,0.286533439938757,1.03134418455488,36.214646493868,44.9642332381228,37.3960528068646,0.338844532069132,0,0,0,0,0,0.384218305321555,8.08778976006126,10.8004750665353,6.52007380189284,69.6988401945281,66.7022993673873,17.5161842877384,16.3895755441184,16.5459381589804,126.633263149297,99.4684363683612,99.5370335500458,43.6543612386942,48.6714263964819,47.9240300912219,89.8969256784447,98.483456755544,106.041983957106,65.9968031461016,56.5215572772439,44.5494675522468,0.908714319998209,2.56943304363071,2.31891590961342,0.860423876981386,0,0,0,0,4.91555470461132,0,0,0,3.52108549441701,0,0,0,0,0,0,3.76806803072898,0.776813650941515,8.31275978763019,1.21439728736295,3.34912026143355,2.99800146432876,3.91878865436819,6.70255630673517,3.51866455723091,2.22475470960936,2.16899035379867,0,0.323533699894818,0.662524555381181,1.45462575940567,3.72783522436244,82.8569655542678,119.594069590483,1.78819938646014,0,0,0,109.347166765521,123.525162761029,73.5077959860257,145.490956000935,137.830631501048,103.89402227978,143.421276551898,7.33243419722277,3.85661608891288,3.0326731012041,4.41927897361595,0.780722657776222,3.90833577536904,3.06105620669094,4.37043971723574,6.53150391852747,5.63700369253339,5.71580519814346,13.9699820199068,0.215567992932842,0.945530400839096,0.879755620819744,0.657587197282725,2.22437799380478,1.0447564995665,1.85203922767149,0.796137067273973,0,0,0,0,0.469052119962192,0.36012412292203,0.23674473558521,0.590292695242212,0.308534225774757,0.465067889500816,0.268273401399619,0.934122738937356,0.493679549740441,0.656669856316381,1.4592385718254,0.877199924551994,1.97595103761946,1.8788898626452,95.4716366481138,33.8556174727846,0,1.05780226665418,0.639864751605702,0.232236671860439,0.257734922644187,0.80673409849337,1.11189021922435,1.90225626112559,1.42358718463353,2.30578536613615,2.26201687920243,1.59165177632921,0.19496408711912,0.898819408654221,0.216138049874694,0.796565093017469,3.79335801906163,3.77020091612105,2.25415471346161,4.2766778847516,1.93952487167626,3.0158402552837,0.0632365371242573,0.147610147979602,0.156998727841375,0,0,0,0,0,0.202860121388503,0.241177159752417,0,0.575392274901621,0.324270453550071,0.274561413188081,0,1.48856379067401,0,0.252578877947112,0.538192240565737,0,24.2026679118252,0.568474235311454,0.162964976442026,0.169745085775188,0,1.00503754465089,6.18913466303636,20.8793003207845,19.8620281573801,19.2674279994434,22.6425771493632,23.9240439484977,25.3846923342867,30.5209513606989,0,0,1.47529281905711,3.31124095565679,87.178970363371,115.687934666505,0,1.76729649043061,1.89304931649754,0.390438744296638,2.80050417052639,0.238968797952552,0.445597348164788,1.41538265394416,0.809621403349789,3.79932615284705,1.58115111178609,57.1951943230817,4.68402281187286,3.20518086601059,5.21238269931443,12.8676695918578,0,1.45668381692989,1.209294227859,1.13163047853539,2.06711325016541,2.45948118355142,3.6179961043551,2.90826983582004,1.78248689192361,2.21225730555071,0,1.03135543248187,31.3204437293485,1.26042765821917,2.19909762430683,5.78709994585299,8.86701168211368,19.7989387538298,21.2268236576736,35.3179340972935,0,0,4.19003956304428,0.16488625294148,1.29171541356724,0.361877549568935,0.477489376012546,0.164140899745061,0.874442509889552,85.481064226845,0.512612642393558,0.82554747185289,1.11116716421827,0.376736914009382,0.410082683163076,0.457556346413045,0.169978429993855,0.279902904647316,0.276399947608848,0,0.474503990371703,1.42323626988794,0.756037385752609,1.67270636811575,1.74690050996942,2.02296519577231,1.90102948168273,1.57053565190418,1.29614973291793,0.621339313086926,1.12738587736838,1.34564891439581,0.992750942742586,3.88902376688095,7.10379029127521,7.26511339610346,9.97536528488909,11.3277814814237,21.7058842961221,10.8712854371703,3.45636007509439,0.316011120628178,5.0681303822541,2.87590680061516,1.42912905275575,1.9692936523423,0.993406773906324,0.600977247599844,0.738447635872886,1.00966449948148,0.304827226619999,0.403304740547362,0.974578807397524,0.673482891482306,1.28564592399726,0,0.665957860122194,0,0,3.86379188064381,5.06742683718191,2.93042598827624,0.428736758158132,4.51414893631827,119.162638792201,130.272041931531,137.494923225455,134.732894957451,143.867329151835,139.747871017095,135.004500046361,117.533834041522,121.895308016751,124.780235132189,0.726511433089237,1.59609949360412,2.39027048055788,4.37592090722929,4.61148957781561,4.59608771125035,5.778414922842,5.56294654545014,5.45562656306086,5.55933865880354,7.60437899670719,6.60192194851267,5.43120743325318,7.17081706934536,5.68611142660571,4.28664322154766,6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| |||
|short_description=p1@Spock2 | |||
}} |
Revision as of 12:28, 4 August 2015
Short description: | p1@Spock2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Spock2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_NM_052994, uc007fek.1, uc007fel.1_5end |
EntrezGene: | 94214 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.58e-13 | 23 |
neuroblast (sensu Vertebrata) | 3.58e-13 | 23 |
neuron | 4.60e-09 | 33 |
neuronal stem cell | 4.60e-09 | 33 |
neuroblast | 4.60e-09 | 33 |
electrically signaling cell | 4.60e-09 | 33 |