FFCP PHASE1:Mm9::chr2:167415092..167415116,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=6 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:167415092..167415116,+ | |||
|description=CAGE_peak_at_chr2:167415092..167415116,+ | |description=CAGE_peak_at_chr2:167415092..167415116,+ | ||
|id=chr2:167415092..167415116,+ | |id=chr2:167415092..167415116,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000213,7.19e-11,1;CL:0002078,7.19e-11,1;CL:0000115,7.19e-11,1;CL:0002262,7.19e-11,1;CL:1000398,7.19e-11,1;CL:0000355,2.07e-10,9 | |||
|ontology_enrichment_disease=DOID:0060100!8.53e-15!3;DOID:4045!8.53e-15!3;DOID:0050686!1.24e-07!6 | |ontology_enrichment_disease=DOID:0060100!8.53e-15!3;DOID:4045!8.53e-15!3;DOID:0050686!1.24e-07!6 | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,8.94e-30,3;DOID:4045,8.94e-30,3;DOID:0050686,2.80e-15,6 | |||
|ontology_enrichment_uberon=UBERON:0002329!7.07e-07!11;UBERON:0003077!7.07e-07!11;UBERON:0003059!7.07e-07!11;UBERON:0007282!7.07e-07!11;UBERON:0009618!7.07e-07!11;UBERON:0007285!7.07e-07!11 | |ontology_enrichment_uberon=UBERON:0002329!7.07e-07!11;UBERON:0003077!7.07e-07!11;UBERON:0003059!7.07e-07!11;UBERON:0007282!7.07e-07!11;UBERON:0009618!7.07e-07!11;UBERON:0007285!7.07e-07!11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,7.19e-11,1;UBERON:0001281,7.19e-11,1;UBERON:0000353,7.19e-11,1;UBERON:0003497,7.19e-11,1;UBERON:0003909,7.19e-11,1;UBERON:0003928,7.19e-11,1;UBERON:0003835,7.19e-11,1;UBERON:0003513,7.19e-11,1;UBERON:0001280,7.19e-11,1;UBERON:0004647,7.19e-11,1;UBERON:0002294,7.19e-11,1;UBERON:0001173,7.19e-11,1;UBERON:0004912,7.19e-11,1;UBERON:0005171,7.19e-11,1;UBERON:0001134,2.07e-10,9;UBERON:0002036,2.07e-10,9;UBERON:0002385,2.07e-10,9;UBERON:0000486,2.07e-10,9;UBERON:0007503,2.07e-10,9;UBERON:0001015,2.07e-10,9;UBERON:0002329,2.07e-10,9;UBERON:0003082,2.07e-10,9;UBERON:0003059,2.07e-10,9;UBERON:0007282,2.07e-10,9;UBERON:0004290,2.07e-10,9;UBERON:0009618,2.07e-10,9;UBERON:0000383,1.97e-09,10;UBERON:0007524,1.25e-08,11;UBERON:0003077,1.25e-08,11;UBERON:0007285,1.25e-08,11;UBERON:0002204,1.15e-07,32 | |||
|phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.5304294749514,21.0960543021426,28.7938059185589,107.646362309676,34.1522742479223,35.9277661243054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.2175607966302,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239630249011841,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40442637462647,1.02939162845886,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279902904647316,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.5304294749514,21.0960543021426,28.7938059185589,107.646362309676,34.1522742479223,35.9277661243054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.2175607966302,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239630249011841,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40442637462647,1.02939162845886,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279902904647316,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr2:167415092..167415116,+ | |short_description=p@chr2:167415092..167415116,+ | ||
}} | }} |
Latest revision as of 14:31, 4 August 2015
Short description: | p@chr2:167415092..167415116, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:167415092..167415116, + |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 7.19e-11 | 1 |
meso-epithelial cell | 7.19e-11 | 1 |
endothelial cell | 7.19e-11 | 1 |
endothelial cell of sinusoid | 7.19e-11 | 1 |
endothelial cell of hepatic sinusoid | 7.19e-11 | 1 |
multi-potent skeletal muscle stem cell | 2.07e-10 | 9 |
Ontology term | p-value | n |
---|---|---|
bile duct | 7.19e-11 | 1 |
hepatic sinusoid | 7.19e-11 | 1 |
parenchyma | 7.19e-11 | 1 |
abdomen blood vessel | 7.19e-11 | 1 |
sinusoid | 7.19e-11 | 1 |
digestive system duct | 7.19e-11 | 1 |
abdominal segment blood vessel | 7.19e-11 | 1 |
trunk blood vessel | 7.19e-11 | 1 |
liver parenchyma | 7.19e-11 | 1 |
liver lobule | 7.19e-11 | 1 |
biliary system | 7.19e-11 | 1 |
biliary tree | 7.19e-11 | 1 |
biliary bud | 7.19e-11 | 1 |
hepatic duct | 7.19e-11 | 1 |
skeletal muscle tissue | 2.07e-10 | 9 |
striated muscle tissue | 2.07e-10 | 9 |
muscle tissue | 2.07e-10 | 9 |
multilaminar epithelium | 2.07e-10 | 9 |
epithelial vesicle | 2.07e-10 | 9 |
musculature | 2.07e-10 | 9 |
somite | 2.07e-10 | 9 |
myotome | 2.07e-10 | 9 |
presomitic mesoderm | 2.07e-10 | 9 |
presumptive segmental plate | 2.07e-10 | 9 |
dermomyotome | 2.07e-10 | 9 |
trunk paraxial mesoderm | 2.07e-10 | 9 |
musculature of body | 1.97e-09 | 10 |
dense mesenchyme tissue | 1.25e-08 | 11 |
paraxial mesoderm | 1.25e-08 | 11 |
presumptive paraxial mesoderm | 1.25e-08 | 11 |
musculoskeletal system | 1.15e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 8.94e-30 | 3 |
muscle cancer | 8.94e-30 | 3 |
organ system cancer | 2.80e-15 | 6 |