FFCP PHASE1:Mm9::chr14:65206160..65206173,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2926|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:65206160..65206173,+|id=chr14:65206160..65206173,+|ontology_enrichment_celltype=CL:0000117!2.12e-23!23;CL:0000337!2.12e-23!23;CL:0000540!1.32e-18!33;CL:0000047!1.32e-18!33;CL:0000031!1.32e-18!33;CL:0000404!1.32e-18!33;CL:0000393!2.98e-14!39;CL:0000211!2.98e-14!39;CL:0002319!6.46e-13!43;CL:0000221!2.08e-12!44;CL:0000133!2.08e-12!44;CL:0000055!8.03e-10!50;CL:0002609!8.13e-07!6|ontology_enrichment_celltype_v019_2=CL:0000117,4.92e-40,23;CL:0000337,4.92e-40,23;CL:0000540,3.86e-26,33;CL:0000047,3.86e-26,33;CL:0000031,3.86e-26,33;CL:0000404,3.86e-26,33;CL:0000393,3.12e-21,39;CL:0000211,3.12e-21,39;CL:0002319,1.00e-18,43;CL:0000221,3.59e-18,44;CL:0000133,3.59e-18,44;CL:0002321,2.26e-09,70;CL:0002609,6.76e-09,6;CL:0002613,1.26e-07,3;CL:0002608,1.33e-07,3;CL:0000120,2.27e-07,3;CL:0002610,4.24e-07,3;CL:0002614,6.19e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!9.59e-27!63;UBERON:0002346!1.09e-25!71;UBERON:0003075!1.09e-25!71;UBERON:0007284!1.09e-25!71;UBERON:0004121!5.84e-24!102;UBERON:0000924!5.84e-24!102;UBERON:0006601!5.84e-24!102;UBERON:0001017!7.62e-24!73;UBERON:0005743!7.62e-24!73;UBERON:0000073!1.05e-23!75;UBERON:0001016!1.05e-23!75;UBERON:0003056!2.65e-22!49;UBERON:0001049!2.74e-21!52;UBERON:0005068!2.74e-21!52;UBERON:0006241!2.74e-21!52;UBERON:0007135!2.74e-21!52;UBERON:0000955!6.78e-20!50;UBERON:0006238!6.78e-20!50;UBERON:0002020!9.53e-20!34;UBERON:0002616!4.47e-19!49;UBERON:0002791!1.73e-15!29;UBERON:0003528!1.73e-15!29;UBERON:0001893!1.73e-15!29;UBERON:0007811!2.64e-15!86;UBERON:0003080!3.04e-14!40;UBERON:0002780!1.95e-13!39;UBERON:0001890!1.95e-13!39;UBERON:0006240!1.95e-13!39;UBERON:0000153!1.02e-12!94;UBERON:0000970!4.87e-10!9;UBERON:0000019!4.87e-10!9;UBERON:0000047!4.87e-10!9;UBERON:0004088!4.87e-10!9;UBERON:0002104!4.87e-10!9;UBERON:0001456!4.87e-10!9;UBERON:0003072!4.87e-10!9;UBERON:0003071!4.87e-10!9;UBERON:0004128!4.87e-10!9;UBERON:0002420!7.00e-09!8;UBERON:0007245!7.00e-09!8;UBERON:0010009!7.00e-09!8;UBERON:0010011!7.00e-09!8;UBERON:0000454!7.00e-09!8;UBERON:0000956!1.16e-08!21;UBERON:0001869!1.16e-08!21;UBERON:0000203!1.16e-08!21;UBERON:0000020!5.42e-08!12;UBERON:0001032!5.42e-08!12;UBERON:0004456!5.42e-08!12;UBERON:0003076!5.42e-08!12;UBERON:0003057!5.42e-08!12;UBERON:0001444!1.05e-07!11;UBERON:0005085!3.77e-07!13;UBERON:0002298!9.83e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.61e-28,64;UBERON:0003075,2.61e-28,64;UBERON:0007284,2.61e-28,64;UBERON:0004121,2.01e-27,95;UBERON:0000924,2.01e-27,95;UBERON:0006601,2.01e-27,95;UBERON:0010371,7.83e-24,73;UBERON:0001017,5.57e-22,73;UBERON:0000073,1.04e-21,54;UBERON:0001016,3.47e-21,75;UBERON:0002020,2.47e-19,34;UBERON:0003056,3.34e-19,49;UBERON:0001049,8.52e-19,52;UBERON:0005068,8.52e-19,52;UBERON:0006241,8.52e-19,52;UBERON:0007135,8.52e-19,52;UBERON:0010314,2.91e-17,92;UBERON:0000970,2.08e-14,9;UBERON:0000019,2.08e-14,9;UBERON:0000047,2.08e-14,9;UBERON:0010312,2.08e-14,9;UBERON:0004088,2.08e-14,9;UBERON:0002104,2.08e-14,9;UBERON:0001456,2.08e-14,9;UBERON:0003072,2.08e-14,9;UBERON:0004128,2.08e-14,9;UBERON:0003071,2.08e-14,9;UBERON:0000955,5.12e-13,47;UBERON:0006238,5.12e-13,47;UBERON:0003528,8.22e-13,29;UBERON:0002791,8.22e-13,29;UBERON:0001893,8.22e-13,29;UBERON:0002420,1.26e-12,8;UBERON:0007245,1.26e-12,8;UBERON:0010009,1.26e-12,8;UBERON:0010011,1.26e-12,8;UBERON:0000454,1.26e-12,8;UBERON:0003076,5.25e-12,12;UBERON:0003057,5.25e-12,12;UBERON:0002616,5.74e-12,46;UBERON:0001444,1.66e-11,11;UBERON:0002240,5.71e-11,6;UBERON:0005174,5.71e-11,6;UBERON:0001137,5.71e-11,6;UBERON:0000020,2.02e-10,12;UBERON:0001032,2.02e-10,12;UBERON:0004456,2.02e-10,12;UBERON:0003080,1.26e-09,40;UBERON:0000033,1.67e-09,13;UBERON:0005085,1.67e-09,13;UBERON:0001948,2.07e-09,5;UBERON:0002315,2.07e-09,5;UBERON:0002950,1.25e-08,4;UBERON:0001891,1.25e-08,4;UBERON:0009616,1.25e-08,4;UBERON:0010286,1.25e-08,4;UBERON:0002780,1.29e-08,39;UBERON:0001890,1.29e-08,39;UBERON:0006240,1.29e-08,39;UBERON:0000369,2.18e-07,5;UBERON:0002435,2.18e-07,5;UBERON:0000204,2.18e-07,5;UBERON:0010082,2.18e-07,5;UBERON:0004684,4.24e-07,3;UBERON:0002275,4.24e-07,3;UBERON:0002038,6.19e-07,3;UBERON:0009663,6.19e-07,3;UBERON:0009661,6.19e-07,3;UBERON:0000125,6.19e-07,3;UBERON:0002308,6.19e-07,3|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.47412674750713,2.11596391708813,7.60597684207415,0,0,0,0,0,0,0,2.17748185847803,1.89008313664367,0.420649922702764,1.71390590642282,1.54607978666129,3.06226998037385,5.271500906003,8.27296907949019,4.40463523997555,2.80912143787413,2.4577045320999,4.61602007055678,6.77008562657831,4.68822033501084,4.18774498502071,2.25105044012672,2.44477196442896,1.47314292736834,2.13557521198654,2.60959224155421,0.151452386666368,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,6.14839673724249,8.58731497935166,0,0,0,0,2.24685959107234,0.457500602818626,2.1361239859187,0.173824320192276,1.02286182932132,0.62336413367868,0.648965052271031,0,0,0,3.36706969418358,0.780722657776222,2.06911893990126,1.44049703844279,2.56198190320716,4.28629944653366,4.99643509110914,7.68354141389776,9.57202471734358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0.617427674275707,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.963303539926752,1.52375192569864,0,0,0.631016438832513,0,0,0,0.222798674082394,0,0,0.292255857911312,0,1.92792789853084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.258717367565509,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,2.03967832211561,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0.920650473014354,0,2.06223818812425,0,0.755393897389701,0.675022500231806,1.35096360967266,0.453142408984205,0,0.62272408550506,3.59122386060928,1.70733605754134,0.243106717068294,0.628839487883947,0.183843508450014,0.222246727801615,0,0,0.505394423527595,0.25347929989024,0.565879024158229,0.561849044819294,0.448176066834085,0.516919220600519,0.476293691283074,0.811190281613988,0.38581844092741,0.412085900803307,0.294397840268795,0.342869252385415,0.177475806159338,0,0.290692833264657,0.282328141245992,0.676916863133412,0.182927972872773,0.789209134313529,0.950628796921032,0,0.474540072496697,0.492522411877817,0,0.619747364743864,0.192906610981141,1.24905288968973,0,0.214871054048298,0,0.220591419119515,0|short_description=p@chr14:65206160..65206173,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2926 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr14:65206160..65206173,+ | |||
|description=CAGE_peak_at_chr14:65206160..65206173,+ | |||
|id=chr14:65206160..65206173,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.12e-23!23;CL:0000337!2.12e-23!23;CL:0000540!1.32e-18!33;CL:0000047!1.32e-18!33;CL:0000031!1.32e-18!33;CL:0000404!1.32e-18!33;CL:0000393!2.98e-14!39;CL:0000211!2.98e-14!39;CL:0002319!6.46e-13!43;CL:0000221!2.08e-12!44;CL:0000133!2.08e-12!44;CL:0000055!8.03e-10!50;CL:0002609!8.13e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.92e-40,23;CL:0000337,4.92e-40,23;CL:0000540,3.86e-26,33;CL:0000047,3.86e-26,33;CL:0000031,3.86e-26,33;CL:0000404,3.86e-26,33;CL:0000393,3.12e-21,39;CL:0000211,3.12e-21,39;CL:0002319,1.00e-18,43;CL:0000221,3.59e-18,44;CL:0000133,3.59e-18,44;CL:0002321,2.26e-09,70;CL:0002609,6.76e-09,6;CL:0002613,1.26e-07,3;CL:0002608,1.33e-07,3;CL:0000120,2.27e-07,3;CL:0002610,4.24e-07,3;CL:0002614,6.19e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!9.59e-27!63;UBERON:0002346!1.09e-25!71;UBERON:0003075!1.09e-25!71;UBERON:0007284!1.09e-25!71;UBERON:0004121!5.84e-24!102;UBERON:0000924!5.84e-24!102;UBERON:0006601!5.84e-24!102;UBERON:0001017!7.62e-24!73;UBERON:0005743!7.62e-24!73;UBERON:0000073!1.05e-23!75;UBERON:0001016!1.05e-23!75;UBERON:0003056!2.65e-22!49;UBERON:0001049!2.74e-21!52;UBERON:0005068!2.74e-21!52;UBERON:0006241!2.74e-21!52;UBERON:0007135!2.74e-21!52;UBERON:0000955!6.78e-20!50;UBERON:0006238!6.78e-20!50;UBERON:0002020!9.53e-20!34;UBERON:0002616!4.47e-19!49;UBERON:0002791!1.73e-15!29;UBERON:0003528!1.73e-15!29;UBERON:0001893!1.73e-15!29;UBERON:0007811!2.64e-15!86;UBERON:0003080!3.04e-14!40;UBERON:0002780!1.95e-13!39;UBERON:0001890!1.95e-13!39;UBERON:0006240!1.95e-13!39;UBERON:0000153!1.02e-12!94;UBERON:0000970!4.87e-10!9;UBERON:0000019!4.87e-10!9;UBERON:0000047!4.87e-10!9;UBERON:0004088!4.87e-10!9;UBERON:0002104!4.87e-10!9;UBERON:0001456!4.87e-10!9;UBERON:0003072!4.87e-10!9;UBERON:0003071!4.87e-10!9;UBERON:0004128!4.87e-10!9;UBERON:0002420!7.00e-09!8;UBERON:0007245!7.00e-09!8;UBERON:0010009!7.00e-09!8;UBERON:0010011!7.00e-09!8;UBERON:0000454!7.00e-09!8;UBERON:0000956!1.16e-08!21;UBERON:0001869!1.16e-08!21;UBERON:0000203!1.16e-08!21;UBERON:0000020!5.42e-08!12;UBERON:0001032!5.42e-08!12;UBERON:0004456!5.42e-08!12;UBERON:0003076!5.42e-08!12;UBERON:0003057!5.42e-08!12;UBERON:0001444!1.05e-07!11;UBERON:0005085!3.77e-07!13;UBERON:0002298!9.83e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.61e-28,64;UBERON:0003075,2.61e-28,64;UBERON:0007284,2.61e-28,64;UBERON:0004121,2.01e-27,95;UBERON:0000924,2.01e-27,95;UBERON:0006601,2.01e-27,95;UBERON:0010371,7.83e-24,73;UBERON:0001017,5.57e-22,73;UBERON:0000073,1.04e-21,54;UBERON:0001016,3.47e-21,75;UBERON:0002020,2.47e-19,34;UBERON:0003056,3.34e-19,49;UBERON:0001049,8.52e-19,52;UBERON:0005068,8.52e-19,52;UBERON:0006241,8.52e-19,52;UBERON:0007135,8.52e-19,52;UBERON:0010314,2.91e-17,92;UBERON:0000970,2.08e-14,9;UBERON:0000019,2.08e-14,9;UBERON:0000047,2.08e-14,9;UBERON:0010312,2.08e-14,9;UBERON:0004088,2.08e-14,9;UBERON:0002104,2.08e-14,9;UBERON:0001456,2.08e-14,9;UBERON:0003072,2.08e-14,9;UBERON:0004128,2.08e-14,9;UBERON:0003071,2.08e-14,9;UBERON:0000955,5.12e-13,47;UBERON:0006238,5.12e-13,47;UBERON:0003528,8.22e-13,29;UBERON:0002791,8.22e-13,29;UBERON:0001893,8.22e-13,29;UBERON:0002420,1.26e-12,8;UBERON:0007245,1.26e-12,8;UBERON:0010009,1.26e-12,8;UBERON:0010011,1.26e-12,8;UBERON:0000454,1.26e-12,8;UBERON:0003076,5.25e-12,12;UBERON:0003057,5.25e-12,12;UBERON:0002616,5.74e-12,46;UBERON:0001444,1.66e-11,11;UBERON:0002240,5.71e-11,6;UBERON:0005174,5.71e-11,6;UBERON:0001137,5.71e-11,6;UBERON:0000020,2.02e-10,12;UBERON:0001032,2.02e-10,12;UBERON:0004456,2.02e-10,12;UBERON:0003080,1.26e-09,40;UBERON:0000033,1.67e-09,13;UBERON:0005085,1.67e-09,13;UBERON:0001948,2.07e-09,5;UBERON:0002315,2.07e-09,5;UBERON:0002950,1.25e-08,4;UBERON:0001891,1.25e-08,4;UBERON:0009616,1.25e-08,4;UBERON:0010286,1.25e-08,4;UBERON:0002780,1.29e-08,39;UBERON:0001890,1.29e-08,39;UBERON:0006240,1.29e-08,39;UBERON:0000369,2.18e-07,5;UBERON:0002435,2.18e-07,5;UBERON:0000204,2.18e-07,5;UBERON:0010082,2.18e-07,5;UBERON:0004684,4.24e-07,3;UBERON:0002275,4.24e-07,3;UBERON:0002038,6.19e-07,3;UBERON:0009663,6.19e-07,3;UBERON:0009661,6.19e-07,3;UBERON:0000125,6.19e-07,3;UBERON:0002308,6.19e-07,3 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.47412674750713,2.11596391708813,7.60597684207415,0,0,0,0,0,0,0,2.17748185847803,1.89008313664367,0.420649922702764,1.71390590642282,1.54607978666129,3.06226998037385,5.271500906003,8.27296907949019,4.40463523997555,2.80912143787413,2.4577045320999,4.61602007055678,6.77008562657831,4.68822033501084,4.18774498502071,2.25105044012672,2.44477196442896,1.47314292736834,2.13557521198654,2.60959224155421,0.151452386666368,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,6.14839673724249,8.58731497935166,0,0,0,0,2.24685959107234,0.457500602818626,2.1361239859187,0.173824320192276,1.02286182932132,0.62336413367868,0.648965052271031,0,0,0,3.36706969418358,0.780722657776222,2.06911893990126,1.44049703844279,2.56198190320716,4.28629944653366,4.99643509110914,7.68354141389776,9.57202471734358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0.617427674275707,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.963303539926752,1.52375192569864,0,0,0.631016438832513,0,0,0,0.222798674082394,0,0,0.292255857911312,0,1.92792789853084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.258717367565509,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,2.03967832211561,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0.920650473014354,0,2.06223818812425,0,0.755393897389701,0.675022500231806,1.35096360967266,0.453142408984205,0,0.62272408550506,3.59122386060928,1.70733605754134,0.243106717068294,0.628839487883947,0.183843508450014,0.222246727801615,0,0,0.505394423527595,0.25347929989024,0.565879024158229,0.561849044819294,0.448176066834085,0.516919220600519,0.476293691283074,0.811190281613988,0.38581844092741,0.412085900803307,0.294397840268795,0.342869252385415,0.177475806159338,0,0.290692833264657,0.282328141245992,0.676916863133412,0.182927972872773,0.789209134313529,0.950628796921032,0,0.474540072496697,0.492522411877817,0,0.619747364743864,0.192906610981141,1.24905288968973,0,0.214871054048298,0,0.220591419119515,0 | |||
|short_description=p@chr14:65206160..65206173,+ | |||
}} |
Latest revision as of 15:47, 4 August 2015
Short description: | p@chr14:65206160..65206173, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:65206160..65206173, + |
Coexpression cluster: | MCL_coexpression_mm9:2926 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.92e-40 | 23 |
neuroblast (sensu Vertebrata) | 4.92e-40 | 23 |
neuron | 3.86e-26 | 33 |
neuronal stem cell | 3.86e-26 | 33 |
neuroblast | 3.86e-26 | 33 |
electrically signaling cell | 3.86e-26 | 33 |
electrically responsive cell | 3.12e-21 | 39 |
electrically active cell | 3.12e-21 | 39 |
neural cell | 1.00e-18 | 43 |
ectodermal cell | 3.59e-18 | 44 |
neurectodermal cell | 3.59e-18 | 44 |
embryonic cell | 2.26e-09 | 70 |
neuron of cerebral cortex | 6.76e-09 | 6 |
striatum neuron | 1.26e-07 | 3 |
hippocampal neuron | 1.33e-07 | 3 |
granule cell | 2.27e-07 | 3 |
raphe nuclei neuron | 4.24e-07 | 3 |
neuron of the substantia nigra | 6.19e-07 | 3 |