FFCP PHASE1:Mm9::chr12:109951983..109951990,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=81 | |MCL_coexpression_id=81 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:109951983..109951990,+ | |||
|description=CAGE_peak_at_chr12:109951983..109951990,+ | |description=CAGE_peak_at_chr12:109951983..109951990,+ | ||
|id=chr12:109951983..109951990,+ | |id=chr12:109951983..109951990,+ | ||
|ontology_enrichment_celltype=CL:0000063!2.93e-23!66;CL:0000144!3.39e-22!121;CL:0000012!3.39e-22!121;CL:0002371!2.22e-20!118;CL:0000548!1.36e-18!115;CL:0000004!1.36e-18!115;CL:0000255!1.36e-18!115;CL:0000034!4.31e-16!97;CL:0002320!2.32e-14!46;CL:0000134!2.32e-14!46;CL:0000988!4.71e-14!32;CL:0002032!4.71e-14!32;CL:0000037!4.71e-14!32;CL:0000566!4.71e-14!32;CL:0000837!4.71e-14!32;CL:0000723!3.23e-13!91;CL:0000048!3.23e-13!91;CL:0000219!1.75e-12!54;CL:0002031!2.32e-11!25;CL:0000738!6.18e-09!17;CL:0002087!6.18e-09!17;CL:0000066!1.31e-08!25;CL:0000049!7.43e-08!19;CL:0000838!1.07e-07!12;CL:0000542!1.84e-07!13;CL:0000051!1.84e-07!13;CL:0000084!5.52e-07!11;CL:0000827!5.52e-07!11;CL:0002076!7.54e-07!15 | |ontology_enrichment_celltype=CL:0000063!2.93e-23!66;CL:0000144!3.39e-22!121;CL:0000012!3.39e-22!121;CL:0002371!2.22e-20!118;CL:0000548!1.36e-18!115;CL:0000004!1.36e-18!115;CL:0000255!1.36e-18!115;CL:0000034!4.31e-16!97;CL:0002320!2.32e-14!46;CL:0000134!2.32e-14!46;CL:0000988!4.71e-14!32;CL:0002032!4.71e-14!32;CL:0000037!4.71e-14!32;CL:0000566!4.71e-14!32;CL:0000837!4.71e-14!32;CL:0000723!3.23e-13!91;CL:0000048!3.23e-13!91;CL:0000219!1.75e-12!54;CL:0002031!2.32e-11!25;CL:0000738!6.18e-09!17;CL:0002087!6.18e-09!17;CL:0000066!1.31e-08!25;CL:0000049!7.43e-08!19;CL:0000838!1.07e-07!12;CL:0000542!1.84e-07!13;CL:0000051!1.84e-07!13;CL:0000084!5.52e-07!11;CL:0000827!5.52e-07!11;CL:0002076!7.54e-07!15 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.32e-20,32;CL:0002032,1.32e-20,32;CL:0000037,1.32e-20,32;CL:0000837,1.32e-20,32;CL:0002320,1.05e-19,46;CL:0000134,1.05e-19,46;CL:0002031,2.24e-18,25;CL:0000219,3.13e-18,54;CL:0000034,9.52e-15,97;CL:0000066,4.07e-14,25;CL:0000838,6.34e-13,12;CL:0000738,1.81e-12,17;CL:0002087,1.81e-12,17;CL:0002076,9.01e-12,15;CL:0000542,1.03e-11,13;CL:0000051,1.03e-11,13;CL:0000084,1.83e-11,11;CL:0000827,1.83e-11,11;CL:0000791,2.07e-11,9;CL:0000789,2.07e-11,9;CL:0002420,2.07e-11,9;CL:0002419,2.07e-11,9;CL:0000790,2.07e-11,9;CL:0000223,3.40e-11,20;CL:0000723,1.32e-10,91;CL:0000048,1.32e-10,91;CL:0000624,2.37e-10,8;CL:0000049,3.20e-10,19;CL:0000893,2.98e-08,6;CL:0002489,2.98e-08,6;CL:0000898,2.98e-08,6;CL:0000809,2.98e-08,6;CL:0000810,2.98e-08,6;CL:0000895,2.98e-08,6;CL:0000808,2.98e-08,6;CL:0000894,2.98e-08,6;CL:0000806,2.98e-08,6;CL:0000807,2.98e-08,6;CL:0000805,2.98e-08,6;CL:0002425,2.98e-08,6;CL:0002436,2.98e-08,6;CL:0002427,2.98e-08,6;CL:0002428,2.98e-08,6;CL:0002429,2.98e-08,6;CL:0002433,2.98e-08,6;CL:0002431,2.98e-08,6;CL:0002432,2.98e-08,6;CL:0000075,6.69e-08,7;CL:0002563,8.18e-08,9;CL:0002251,8.18e-08,9;CL:0000553,1.25e-07,6;CL:0000556,1.25e-07,6;CL:0000839,2.96e-07,13;CL:0000763,4.75e-07,16;CL:0000239,7.13e-07,6;CL:0000677,7.13e-07,6;CL:0000584,7.13e-07,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!2.32e-14!46;UBERON:0000344!3.01e-08!15;UBERON:0002371!4.01e-07!16;UBERON:0001242!5.17e-07!13;UBERON:0000060!5.17e-07!13;UBERON:0001262!5.17e-07!13;UBERON:0004786!5.17e-07!13;UBERON:0004923!6.23e-07!24 | |ontology_enrichment_uberon=UBERON:0002384!2.32e-14!46;UBERON:0000344!3.01e-08!15;UBERON:0002371!4.01e-07!16;UBERON:0001242!5.17e-07!13;UBERON:0000060!5.17e-07!13;UBERON:0001262!5.17e-07!13;UBERON:0004786!5.17e-07!13;UBERON:0004923!6.23e-07!24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.05e-19,46;UBERON:0000344,2.38e-10,15;UBERON:0001242,4.97e-08,13;UBERON:0001262,4.97e-08,13;UBERON:0004786,4.97e-08,13;UBERON:0000485,7.33e-08,11;UBERON:0003350,8.18e-08,9;UBERON:0004808,8.18e-08,9;UBERON:0001277,8.18e-08,9 | |||
|phase1_expression=0.80074423552397,3.14077866875425,2.72999543633722,1.20985684522732,4.00716583957078,2.18243053485457,3.50418960893289,3.61545305636414,9.57363310631334,7.0219357896598,4.96532107853964,1.83475965689274,5.47842335779858,3.14713448708391,0.666219523631325,19.4376256694233,23.0855419782288,22.2400826577558,17.5506475015346,12.7316895539409,0.17008658030214,0.397163804803541,9.92559198727954,5.75972722056264,9.40578052375397,2.29692785646008,5.1691439539089,2.80112602491656,5.51067916423484,3.02436155711917,0.886922042621219,1.27006134691926,0,0,0.866554859253824,6.31691652362271,2.45003227514843,9.62622750694888,6.2506827561904,3.14114246384279,2.94115744015507,10.9287277593351,8.73918635456076,0.503587271902309,0.405507724878058,0,0,0,0.219686182734472,0.194429899074283,0,0,13.4226084846189,5.07753499407941,4.7053131879945,0,0,1.03134418455488,0.404632921719196,0.528990979272033,0,0.338844532069132,0,0.449949858640699,0,0.7104801149461,0.299600110518405,0.384218305321555,0,0.270011876663381,0.210324961351382,0,0.220868540951614,0.489963196859816,0.383381884072945,0,0,0.255374676170375,0.46081959976873,0.131886287730194,0.182975287204819,0,0,0,0.30559649555362,0,0.427115042397309,0.559198337475902,4.08921443999194,3.40072020480535,8.40607017234866,6.0229671388697,0,0.539703191637817,1.29955283489534,0,0.280888840263504,0.170430322578058,7.27400812888033,6.36011234118612,4.08445917352373,5.13305909657271,2.54805239706646,0,5.41227602528035,5.06719730950197,2.52762222507392,0.11418387971906,0,0,0.173485326766136,0.304465478312141,0,0.150722640552623,0,0,0.247194967734374,0,0,0,0,0,0,0,0.209446706813455,0,5.87094110079009,8.99854096490112,5.97230067243404,0,0,0.125654352112864,0,0.255715457330331,0,0,0.305518091550949,0,0.252722758433675,0,0.520481771850815,0,0.180062129805349,0.150704817835715,0.204109497453984,0,0.187403449119458,0.258703370739016,0,0,0.351902248327898,0.43839146485515,0.278047249225598,0,0.205782136407943,0,0.702213187313235,6.94839349209731,0.284163499395593,0,0,0,0.23674473558521,0,0,0,0.268273401399619,0.116765342367169,0,0,0.162137619091711,0,0,0.134206418760372,0,0,0.660837565967596,0.264450566663544,0.213288250535234,0.232236671860439,0,0.201683524623343,0,0,0.474529061544512,0,0,0,0,0,0,0.398282546508734,0.189667900953082,0.228497025219458,0,0.203651327845314,0,0,0.126473074248515,0,0.156998727841375,0,0,0.333690211432188,0.786235980452812,0,0.608580364165509,0,0,0,0.324270453550071,0.274561413188081,0,0,0.312037673114561,0,0,0,0,0.37898282354097,0.651859905768103,0,0,0.335012514883631,0,0,0,0.44292937929755,0.159454768657487,0,0,0.144649058581512,19.6028669121054,13.053736411649,0,0,0,0,0,0.252470927204373,0.315508219416257,0.390438744296638,0.430846795465598,0,0,0.849229592366497,0.404810701674894,0,0.395287777946524,0.321321316421807,0,0.178065603667255,0,0.329940245945071,0,0.242780636154981,0.604647113929502,0,0.295301892880773,0,0,0,0,0,0,0,0.340439605753788,0.540183282093931,0.129358683782755,0,0.354680467284547,0.178368817602071,0,0,0.23467170806371,0.21183207086382,0,0.16488625294148,0,0,0,0,0,0,0.854354403989263,0.206386867963223,0,0,0.410082683163076,0.457556346413045,6.11922347977879,5.318155188299,4.83699908315483,0,0,1.01659733563424,0,0.627264888043406,0.218362563746178,0,0,0.26175594198403,0.129614973291793,0,0,0.149516546043979,0,0,0.258319646955462,0,0.117357238645754,0,0.104859344425711,0.241584120826006,0.288030006257865,0,0,0.205421914329655,0.25984164595559,0.179026695667481,0.39736270956253,0,0.147689527174577,0.100966449948148,0.15241361331,0,0.0974578807397524,0,0.233753804363138,0,1.33191572024439,3.94740969081693,2.85403847818933,0.19318959403219,0,0.183151624267265,0.428736758158132,0,0,0,0,1.89038500578056,0,0,0,0,0,0,0.103787347584177,0,0,0,0.209613162627982,0,0.222246727801615,0.206035057238894,0.320919209591815,0,0,0,0.187283014939765,0.0640251524048693,0.0574354689556133,0.476293691283074,0,0,0,0,0.685738504770831,0,0,0.145346416632329,0,0.0846146078916765,0.182927972872773,0.526139422875686,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0,0,0,0.701794825336225,0,0.191288332068843,0,0.463735671240843 | |phase1_expression=0.80074423552397,3.14077866875425,2.72999543633722,1.20985684522732,4.00716583957078,2.18243053485457,3.50418960893289,3.61545305636414,9.57363310631334,7.0219357896598,4.96532107853964,1.83475965689274,5.47842335779858,3.14713448708391,0.666219523631325,19.4376256694233,23.0855419782288,22.2400826577558,17.5506475015346,12.7316895539409,0.17008658030214,0.397163804803541,9.92559198727954,5.75972722056264,9.40578052375397,2.29692785646008,5.1691439539089,2.80112602491656,5.51067916423484,3.02436155711917,0.886922042621219,1.27006134691926,0,0,0.866554859253824,6.31691652362271,2.45003227514843,9.62622750694888,6.2506827561904,3.14114246384279,2.94115744015507,10.9287277593351,8.73918635456076,0.503587271902309,0.405507724878058,0,0,0,0.219686182734472,0.194429899074283,0,0,13.4226084846189,5.07753499407941,4.7053131879945,0,0,1.03134418455488,0.404632921719196,0.528990979272033,0,0.338844532069132,0,0.449949858640699,0,0.7104801149461,0.299600110518405,0.384218305321555,0,0.270011876663381,0.210324961351382,0,0.220868540951614,0.489963196859816,0.383381884072945,0,0,0.255374676170375,0.46081959976873,0.131886287730194,0.182975287204819,0,0,0,0.30559649555362,0,0.427115042397309,0.559198337475902,4.08921443999194,3.40072020480535,8.40607017234866,6.0229671388697,0,0.539703191637817,1.29955283489534,0,0.280888840263504,0.170430322578058,7.27400812888033,6.36011234118612,4.08445917352373,5.13305909657271,2.54805239706646,0,5.41227602528035,5.06719730950197,2.52762222507392,0.11418387971906,0,0,0.173485326766136,0.304465478312141,0,0.150722640552623,0,0,0.247194967734374,0,0,0,0,0,0,0,0.209446706813455,0,5.87094110079009,8.99854096490112,5.97230067243404,0,0,0.125654352112864,0,0.255715457330331,0,0,0.305518091550949,0,0.252722758433675,0,0.520481771850815,0,0.180062129805349,0.150704817835715,0.204109497453984,0,0.187403449119458,0.258703370739016,0,0,0.351902248327898,0.43839146485515,0.278047249225598,0,0.205782136407943,0,0.702213187313235,6.94839349209731,0.284163499395593,0,0,0,0.23674473558521,0,0,0,0.268273401399619,0.116765342367169,0,0,0.162137619091711,0,0,0.134206418760372,0,0,0.660837565967596,0.264450566663544,0.213288250535234,0.232236671860439,0,0.201683524623343,0,0,0.474529061544512,0,0,0,0,0,0,0.398282546508734,0.189667900953082,0.228497025219458,0,0.203651327845314,0,0,0.126473074248515,0,0.156998727841375,0,0,0.333690211432188,0.786235980452812,0,0.608580364165509,0,0,0,0.324270453550071,0.274561413188081,0,0,0.312037673114561,0,0,0,0,0.37898282354097,0.651859905768103,0,0,0.335012514883631,0,0,0,0.44292937929755,0.159454768657487,0,0,0.144649058581512,19.6028669121054,13.053736411649,0,0,0,0,0,0.252470927204373,0.315508219416257,0.390438744296638,0.430846795465598,0,0,0.849229592366497,0.404810701674894,0,0.395287777946524,0.321321316421807,0,0.178065603667255,0,0.329940245945071,0,0.242780636154981,0.604647113929502,0,0.295301892880773,0,0,0,0,0,0,0,0.340439605753788,0.540183282093931,0.129358683782755,0,0.354680467284547,0.178368817602071,0,0,0.23467170806371,0.21183207086382,0,0.16488625294148,0,0,0,0,0,0,0.854354403989263,0.206386867963223,0,0,0.410082683163076,0.457556346413045,6.11922347977879,5.318155188299,4.83699908315483,0,0,1.01659733563424,0,0.627264888043406,0.218362563746178,0,0,0.26175594198403,0.129614973291793,0,0,0.149516546043979,0,0,0.258319646955462,0,0.117357238645754,0,0.104859344425711,0.241584120826006,0.288030006257865,0,0,0.205421914329655,0.25984164595559,0.179026695667481,0.39736270956253,0,0.147689527174577,0.100966449948148,0.15241361331,0,0.0974578807397524,0,0.233753804363138,0,1.33191572024439,3.94740969081693,2.85403847818933,0.19318959403219,0,0.183151624267265,0.428736758158132,0,0,0,0,1.89038500578056,0,0,0,0,0,0,0.103787347584177,0,0,0,0.209613162627982,0,0.222246727801615,0.206035057238894,0.320919209591815,0,0,0,0.187283014939765,0.0640251524048693,0.0574354689556133,0.476293691283074,0,0,0,0,0.685738504770831,0,0,0.145346416632329,0,0.0846146078916765,0.182927972872773,0.526139422875686,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0,0,0,0.701794825336225,0,0.191288332068843,0,0.463735671240843 | ||
|short_description=p@chr12:109951983..109951990,+ | |short_description=p@chr12:109951983..109951990,+ | ||
}} | }} |
Latest revision as of 16:34, 4 August 2015
Short description: | p@chr12:109951983..109951990, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:109951983..109951990, + |
Coexpression cluster: | MCL_coexpression_mm9:81 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.05e-19 | 46 |
mucosa | 2.38e-10 | 15 |
intestinal mucosa | 4.97e-08 | 13 |
wall of intestine | 4.97e-08 | 13 |
gastrointestinal system mucosa | 4.97e-08 | 13 |
simple columnar epithelium | 7.33e-08 | 11 |
epithelium of mucosa | 8.18e-08 | 9 |
gastrointestinal system epithelium | 8.18e-08 | 9 |
intestinal epithelium | 8.18e-08 | 9 |