FFCP PHASE1:Mm9::chr2:178062216..178062239,+: Difference between revisions
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{{FFCP|EntrezGene=74189|HGNC=|MCL_coexpression_id=643|UniProt=|association_with_transcript=-21bp_to_ENSMUST00000141272_5end|description=CAGE_peak_7_at_Phactr3_5end|id=chr2:178062216..178062239,+|ontology_enrichment_celltype=CL:0000117!9.60e-19!23;CL:0000337!9.60e-19!23;CL:0000540!1.80e-12!33;CL:0000047!1.80e-12!33;CL:0000031!1.80e-12!33;CL:0000404!1.80e-12!33;CL:0000393!3.11e-09!39;CL:0000211!3.11e-09!39;CL:0002319!1.25e-07!43;CL:0000221!2.78e-07!44;CL:0000133!2.78e-07!44;CL:0002609!6.09e-07!6|ontology_enrichment_celltype_v019_2=CL:0000117,8.74e-39,23;CL:0000337,8.74e-39,23;CL:0000540,5.04e-26,33;CL:0000047,5.04e-26,33;CL:0000031,5.04e-26,33;CL:0000404,5.04e-26,33;CL:0000393,1.67e-21,39;CL:0000211,1.67e-21,39;CL:0002319,3.44e-19,43;CL:0002609,4.08e-19,6;CL:0000221,1.12e-18,44;CL:0000133,1.12e-18,44;CL:0002613,2.52e-11,3;CL:0000120,4.71e-11,3;CL:0002612,8.72e-11,3;CL:0002321,1.75e-10,70;CL:0002608,2.01e-10,3;CL:0000723,2.75e-07,91;CL:0000048,2.75e-07,91;CL:0002611,5.12e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!6.10e-18!52;UBERON:0005068!6.10e-18!52;UBERON:0006241!6.10e-18!52;UBERON:0007135!6.10e-18!52;UBERON:0002020!2.94e-16!34;UBERON:0001017!3.19e-16!73;UBERON:0005743!3.19e-16!73;UBERON:0000073!2.31e-15!75;UBERON:0001016!2.31e-15!75;UBERON:0002346!3.27e-15!71;UBERON:0003075!3.27e-15!71;UBERON:0007284!3.27e-15!71;UBERON:0000955!3.03e-14!50;UBERON:0006238!3.03e-14!50;UBERON:0000033!7.41e-14!63;UBERON:0002616!1.27e-13!49;UBERON:0003056!2.02e-13!49;UBERON:0003080!6.70e-13!40;UBERON:0002780!3.57e-12!39;UBERON:0001890!3.57e-12!39;UBERON:0006240!3.57e-12!39;UBERON:0002791!5.06e-12!29;UBERON:0003528!5.06e-12!29;UBERON:0001893!5.06e-12!29;UBERON:0004121!1.23e-11!102;UBERON:0000924!1.23e-11!102;UBERON:0006601!1.23e-11!102;UBERON:0002420!4.86e-08!8;UBERON:0007245!4.86e-08!8;UBERON:0010009!4.86e-08!8;UBERON:0010011!4.86e-08!8;UBERON:0000454!4.86e-08!8;UBERON:0007811!8.42e-07!86;UBERON:0002240!8.57e-07!6;UBERON:0005174!8.57e-07!6;UBERON:0001137!8.57e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0002020,4.62e-25,34;UBERON:0001049,2.59e-19,52;UBERON:0005068,2.59e-19,52;UBERON:0006241,2.59e-19,52;UBERON:0007135,2.59e-19,52;UBERON:0000073,1.84e-18,54;UBERON:0001017,4.75e-18,73;UBERON:0001016,1.86e-17,75;UBERON:0000369,1.91e-17,5;UBERON:0002435,1.91e-17,5;UBERON:0000204,1.91e-17,5;UBERON:0010082,1.91e-17,5;UBERON:0001948,3.69e-16,5;UBERON:0002315,3.69e-16,5;UBERON:0002346,5.39e-15,64;UBERON:0003075,5.39e-15,64;UBERON:0007284,5.39e-15,64;UBERON:0003528,1.64e-14,29;UBERON:0002791,1.64e-14,29;UBERON:0001893,1.64e-14,29;UBERON:0002240,1.95e-13,6;UBERON:0005174,1.95e-13,6;UBERON:0001137,1.95e-13,6;UBERON:0004121,6.72e-13,95;UBERON:0000924,6.72e-13,95;UBERON:0006601,6.72e-13,95;UBERON:0010371,1.10e-12,73;UBERON:0003080,1.23e-11,40;UBERON:0002616,1.84e-11,46;UBERON:0000955,3.68e-11,47;UBERON:0006238,3.68e-11,47;UBERON:0002420,8.33e-11,8;UBERON:0007245,8.33e-11,8;UBERON:0010009,8.33e-11,8;UBERON:0010011,8.33e-11,8;UBERON:0000454,8.33e-11,8;UBERON:0002257,8.72e-11,3;UBERON:0002780,3.31e-10,39;UBERON:0001890,3.31e-10,39;UBERON:0006240,3.31e-10,39;UBERON:0010314,2.71e-09,92;UBERON:0003076,3.24e-09,12;UBERON:0003057,3.24e-09,12;UBERON:0003056,4.85e-09,49;UBERON:0001954,9.32e-08,7;UBERON:0003022,9.32e-08,7;UBERON:0002421,9.32e-08,7;UBERON:0000349,9.32e-08,7;UBERON:0002600,9.32e-08,7;UBERON:0002256,5.12e-07,2;UBERON:0000956,7.82e-07,21;UBERON:0001869,7.82e-07,21;UBERON:0000203,7.82e-07,21;UBERON:0000025,8.84e-07,114|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29616883407888,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02316460859598,4.23192783417626,6.33831403506179,0,0,0,0,0,0,0,1.24427534770173,2.43010688997043,2.52389953621658,1.14260393761521,1.32521124570968,2.20483438586917,2.68367318851062,1.83843757322004,0,0.383062014255563,0.307213066512487,3.95658863190582,4.11694396210843,5.73004707612436,0.279182999001381,0.56276261003168,0.916789486660861,3.83017161115768,2.13557521198654,3.72798891650601,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0,0.117588707135705,0,0,0.144599356919912,0,0,0,0,0,0,0.41889341362691,0,0,0,0,1.04853447583376,1.37250180845588,8.41884159156192,0.347648640384553,0.255715457330331,0.20778804455956,0.973447578406546,0,0,0,0,0.130120442962704,0,0,0.150704817835715,0.544291993210623,0.12811372028485,0.187403449119458,0.258703370739016,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0.414251545071004,0,0,0.23674473558521,0.393528463494808,0.308534225774757,0,0,0,0.329119699826961,0.164167464079095,0.0810688095458557,0,0,0.134206418760372,0.420579897128254,3.08713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80275294993896,1.40654023910644,0,0,0,0,0,0,0,0,0.404810701674894,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0.214337035031592,0,0.178368817602071,0.329098041204242,0.304464949114599,0,0,0,0,0,0,0,0,0,0.927126510052548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269728692769641,0.165306911450672,0,0,0,10.1464728963154,0,0,0,0.129159823477731,0,0.117357238645754,0,0,7.9722759872582,8.64090018773596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0.572895513439397,0.343706364687375,0,0,0,0.45032120322422,0.906284817968409,0,0.103787347584177,0,0.682934423016537,0.972426868273176,0.419226325255965,0.367687016900028,0.44449345560323,1.03017528619447,0.64183841918363,0.505394423527595,0,0.188626341386076,0.280924522409647,0.768301828858431,0.516919220600519,0.952587382566147,0.579421629724277,0.77163688185482,0.412085900803307,0.441596760403192,0.342869252385415,0.532427418478012,0.238436189947321,0.872078499793971,0.752875043322645,0.846146078916765,0.365855945745545,0.263069711437843,0.407412341537585,0,0.711810108745045,0.29551344712669,0.818462086339379,0.309873682371932,0,0.749431733813838,0.233931608445408,0,0.191288332068843,0.220591419119515,0|short_description=p7@Phactr3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:74189 | |||
|HGNC= | |||
|MCL_coexpression_id=643 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-21bp_to_ENSMUST00000141272_5end | |||
|cluster_id=chr2:178062216..178062239,+ | |||
|description=CAGE_peak_7_at_Phactr3_5end | |||
|id=chr2:178062216..178062239,+ | |||
|ontology_enrichment_celltype=CL:0000117!9.60e-19!23;CL:0000337!9.60e-19!23;CL:0000540!1.80e-12!33;CL:0000047!1.80e-12!33;CL:0000031!1.80e-12!33;CL:0000404!1.80e-12!33;CL:0000393!3.11e-09!39;CL:0000211!3.11e-09!39;CL:0002319!1.25e-07!43;CL:0000221!2.78e-07!44;CL:0000133!2.78e-07!44;CL:0002609!6.09e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.74e-39,23;CL:0000337,8.74e-39,23;CL:0000540,5.04e-26,33;CL:0000047,5.04e-26,33;CL:0000031,5.04e-26,33;CL:0000404,5.04e-26,33;CL:0000393,1.67e-21,39;CL:0000211,1.67e-21,39;CL:0002319,3.44e-19,43;CL:0002609,4.08e-19,6;CL:0000221,1.12e-18,44;CL:0000133,1.12e-18,44;CL:0002613,2.52e-11,3;CL:0000120,4.71e-11,3;CL:0002612,8.72e-11,3;CL:0002321,1.75e-10,70;CL:0002608,2.01e-10,3;CL:0000723,2.75e-07,91;CL:0000048,2.75e-07,91;CL:0002611,5.12e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.10e-18!52;UBERON:0005068!6.10e-18!52;UBERON:0006241!6.10e-18!52;UBERON:0007135!6.10e-18!52;UBERON:0002020!2.94e-16!34;UBERON:0001017!3.19e-16!73;UBERON:0005743!3.19e-16!73;UBERON:0000073!2.31e-15!75;UBERON:0001016!2.31e-15!75;UBERON:0002346!3.27e-15!71;UBERON:0003075!3.27e-15!71;UBERON:0007284!3.27e-15!71;UBERON:0000955!3.03e-14!50;UBERON:0006238!3.03e-14!50;UBERON:0000033!7.41e-14!63;UBERON:0002616!1.27e-13!49;UBERON:0003056!2.02e-13!49;UBERON:0003080!6.70e-13!40;UBERON:0002780!3.57e-12!39;UBERON:0001890!3.57e-12!39;UBERON:0006240!3.57e-12!39;UBERON:0002791!5.06e-12!29;UBERON:0003528!5.06e-12!29;UBERON:0001893!5.06e-12!29;UBERON:0004121!1.23e-11!102;UBERON:0000924!1.23e-11!102;UBERON:0006601!1.23e-11!102;UBERON:0002420!4.86e-08!8;UBERON:0007245!4.86e-08!8;UBERON:0010009!4.86e-08!8;UBERON:0010011!4.86e-08!8;UBERON:0000454!4.86e-08!8;UBERON:0007811!8.42e-07!86;UBERON:0002240!8.57e-07!6;UBERON:0005174!8.57e-07!6;UBERON:0001137!8.57e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,4.62e-25,34;UBERON:0001049,2.59e-19,52;UBERON:0005068,2.59e-19,52;UBERON:0006241,2.59e-19,52;UBERON:0007135,2.59e-19,52;UBERON:0000073,1.84e-18,54;UBERON:0001017,4.75e-18,73;UBERON:0001016,1.86e-17,75;UBERON:0000369,1.91e-17,5;UBERON:0002435,1.91e-17,5;UBERON:0000204,1.91e-17,5;UBERON:0010082,1.91e-17,5;UBERON:0001948,3.69e-16,5;UBERON:0002315,3.69e-16,5;UBERON:0002346,5.39e-15,64;UBERON:0003075,5.39e-15,64;UBERON:0007284,5.39e-15,64;UBERON:0003528,1.64e-14,29;UBERON:0002791,1.64e-14,29;UBERON:0001893,1.64e-14,29;UBERON:0002240,1.95e-13,6;UBERON:0005174,1.95e-13,6;UBERON:0001137,1.95e-13,6;UBERON:0004121,6.72e-13,95;UBERON:0000924,6.72e-13,95;UBERON:0006601,6.72e-13,95;UBERON:0010371,1.10e-12,73;UBERON:0003080,1.23e-11,40;UBERON:0002616,1.84e-11,46;UBERON:0000955,3.68e-11,47;UBERON:0006238,3.68e-11,47;UBERON:0002420,8.33e-11,8;UBERON:0007245,8.33e-11,8;UBERON:0010009,8.33e-11,8;UBERON:0010011,8.33e-11,8;UBERON:0000454,8.33e-11,8;UBERON:0002257,8.72e-11,3;UBERON:0002780,3.31e-10,39;UBERON:0001890,3.31e-10,39;UBERON:0006240,3.31e-10,39;UBERON:0010314,2.71e-09,92;UBERON:0003076,3.24e-09,12;UBERON:0003057,3.24e-09,12;UBERON:0003056,4.85e-09,49;UBERON:0001954,9.32e-08,7;UBERON:0003022,9.32e-08,7;UBERON:0002421,9.32e-08,7;UBERON:0000349,9.32e-08,7;UBERON:0002600,9.32e-08,7;UBERON:0002256,5.12e-07,2;UBERON:0000956,7.82e-07,21;UBERON:0001869,7.82e-07,21;UBERON:0000203,7.82e-07,21;UBERON:0000025,8.84e-07,114 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29616883407888,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02316460859598,4.23192783417626,6.33831403506179,0,0,0,0,0,0,0,1.24427534770173,2.43010688997043,2.52389953621658,1.14260393761521,1.32521124570968,2.20483438586917,2.68367318851062,1.83843757322004,0,0.383062014255563,0.307213066512487,3.95658863190582,4.11694396210843,5.73004707612436,0.279182999001381,0.56276261003168,0.916789486660861,3.83017161115768,2.13557521198654,3.72798891650601,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0,0.117588707135705,0,0,0.144599356919912,0,0,0,0,0,0,0.41889341362691,0,0,0,0,1.04853447583376,1.37250180845588,8.41884159156192,0.347648640384553,0.255715457330331,0.20778804455956,0.973447578406546,0,0,0,0,0.130120442962704,0,0,0.150704817835715,0.544291993210623,0.12811372028485,0.187403449119458,0.258703370739016,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0.414251545071004,0,0,0.23674473558521,0.393528463494808,0.308534225774757,0,0,0,0.329119699826961,0.164167464079095,0.0810688095458557,0,0,0.134206418760372,0.420579897128254,3.08713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80275294993896,1.40654023910644,0,0,0,0,0,0,0,0,0.404810701674894,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0.214337035031592,0,0.178368817602071,0.329098041204242,0.304464949114599,0,0,0,0,0,0,0,0,0,0.927126510052548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269728692769641,0.165306911450672,0,0,0,10.1464728963154,0,0,0,0.129159823477731,0,0.117357238645754,0,0,7.9722759872582,8.64090018773596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0.572895513439397,0.343706364687375,0,0,0,0.45032120322422,0.906284817968409,0,0.103787347584177,0,0.682934423016537,0.972426868273176,0.419226325255965,0.367687016900028,0.44449345560323,1.03017528619447,0.64183841918363,0.505394423527595,0,0.188626341386076,0.280924522409647,0.768301828858431,0.516919220600519,0.952587382566147,0.579421629724277,0.77163688185482,0.412085900803307,0.441596760403192,0.342869252385415,0.532427418478012,0.238436189947321,0.872078499793971,0.752875043322645,0.846146078916765,0.365855945745545,0.263069711437843,0.407412341537585,0,0.711810108745045,0.29551344712669,0.818462086339379,0.309873682371932,0,0.749431733813838,0.233931608445408,0,0.191288332068843,0.220591419119515,0 | |||
|short_description=p7@Phactr3 | |||
}} |
Revision as of 16:55, 4 August 2015
Short description: | p7@Phactr3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Phactr3_5end |
Coexpression cluster: | MCL_coexpression_mm9:643 |
Association with transcript: | -21bp_to_ENSMUST00000141272_5end |
EntrezGene: | 74189 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.74e-39 | 23 |
neuroblast (sensu Vertebrata) | 8.74e-39 | 23 |
neuron | 5.04e-26 | 33 |
neuronal stem cell | 5.04e-26 | 33 |
neuroblast | 5.04e-26 | 33 |
electrically signaling cell | 5.04e-26 | 33 |
electrically responsive cell | 1.67e-21 | 39 |
electrically active cell | 1.67e-21 | 39 |
neural cell | 3.44e-19 | 43 |
neuron of cerebral cortex | 4.08e-19 | 6 |
ectodermal cell | 1.12e-18 | 44 |
neurectodermal cell | 1.12e-18 | 44 |
striatum neuron | 2.52e-11 | 3 |
granule cell | 4.71e-11 | 3 |
neuron of the ventral spinal cord | 8.72e-11 | 3 |
embryonic cell | 1.75e-10 | 70 |
hippocampal neuron | 2.01e-10 | 3 |
somatic stem cell | 2.75e-07 | 91 |
multi fate stem cell | 2.75e-07 | 91 |
neuron of the dorsal spinal cord | 5.12e-07 | 2 |