FFCP PHASE1:Mm9::chr12:112909692..112909703,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=303|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:112909692..112909703,-|id=chr12:112909692..112909703,-|ontology_enrichment_celltype=CL:0000221!1.92e-23!44;CL:0000133!1.92e-23!44;CL:0002319!2.29e-23!43;CL:0000055!5.85e-22!50;CL:0002321!1.41e-18!70;CL:0000220!1.41e-18!70;CL:0000540!1.42e-15!33;CL:0000047!1.42e-15!33;CL:0000031!1.42e-15!33;CL:0000404!1.42e-15!33;CL:0000393!3.73e-15!39;CL:0000211!3.73e-15!39;CL:0000117!5.01e-13!23;CL:0000337!5.01e-13!23;CL:0000548!5.92e-12!115;CL:0000004!5.92e-12!115;CL:0000255!5.92e-12!115;CL:0002371!4.15e-11!118;CL:0000144!2.58e-10!121;CL:0000012!2.58e-10!121;CL:0000333!6.39e-09!10;CL:0000095!6.39e-09!10;CL:0000243!6.39e-09!10;CL:0000123!6.39e-09!10;CL:0000125!6.39e-09!10;CL:0000030!6.39e-09!10;CL:0000339!6.39e-09!10;CL:0002453!2.60e-08!8;CL:0000723!4.31e-07!91;CL:0000048!4.31e-07!91;CL:0000034!8.90e-07!97|ontology_enrichment_celltype_v019_2=CL:0002453,2.83e-16,8;CL:0000333,8.73e-13,10;CL:0000095,8.73e-13,10;CL:0000243,8.73e-13,10;CL:0000123,8.73e-13,10;CL:0000125,8.73e-13,10;CL:0000030,8.73e-13,10;CL:0000339,8.73e-13,10;CL:0002319,5.74e-12,43;CL:0000221,1.31e-11,44;CL:0000133,1.31e-11,44;CL:0000128,3.03e-11,6;CL:0000126,3.03e-11,6;CL:0000127,3.03e-11,6;CL:0002194,1.32e-10,4;CL:0000766,1.32e-10,4;CL:0000234,1.32e-10,4;CL:0000576,1.32e-10,4;CL:0000235,1.32e-10,4;CL:0000864,1.32e-10,4;CL:0002009,1.32e-10,4;CL:0000040,1.32e-10,4;CL:0000559,1.32e-10,4;CL:0000117,3.14e-07,23;CL:0000337,3.14e-07,23;CL:0002321,7.09e-07,70;CL:0000878,8.43e-07,2;CL:0000129,8.43e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.09e-31!75;UBERON:0001016!1.09e-31!75;UBERON:0001017!1.19e-30!73;UBERON:0005743!1.19e-30!73;UBERON:0004121!1.97e-24!102;UBERON:0000924!1.97e-24!102;UBERON:0006601!1.97e-24!102;UBERON:0001049!3.51e-21!52;UBERON:0005068!3.51e-21!52;UBERON:0006241!3.51e-21!52;UBERON:0007135!3.51e-21!52;UBERON:0000955!9.11e-20!50;UBERON:0006238!9.11e-20!50;UBERON:0000033!9.62e-20!63;UBERON:0002346!9.68e-20!71;UBERON:0003075!9.68e-20!71;UBERON:0007284!9.68e-20!71;UBERON:0002020!3.33e-19!34;UBERON:0002616!4.23e-19!49;UBERON:0002791!1.83e-15!29;UBERON:0003528!1.83e-15!29;UBERON:0001893!1.83e-15!29;UBERON:0003056!1.06e-13!49;UBERON:0003080!5.60e-13!40;UBERON:0002780!2.05e-12!39;UBERON:0001890!2.05e-12!39;UBERON:0006240!2.05e-12!39;UBERON:0000956!7.95e-11!21;UBERON:0001869!7.95e-11!21;UBERON:0000203!7.95e-11!21;UBERON:0007811!2.18e-10!86;UBERON:0003076!1.36e-09!12;UBERON:0003057!1.36e-09!12;UBERON:0002619!1.04e-08!17;UBERON:0000153!3.94e-08!94;UBERON:0002021!2.42e-07!10;UBERON:0000411!2.42e-07!10;UBERON:0001950!2.42e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.89e-21,73;UBERON:0001016,1.57e-20,75;UBERON:0000073,2.34e-19,54;UBERON:0002021,1.18e-18,10;UBERON:0000411,1.18e-18,10;UBERON:0001950,1.18e-18,10;UBERON:0002020,1.05e-17,34;UBERON:0001049,1.92e-16,52;UBERON:0005068,1.92e-16,52;UBERON:0006241,1.92e-16,52;UBERON:0007135,1.92e-16,52;UBERON:0002619,9.32e-16,17;UBERON:0004121,6.91e-15,95;UBERON:0000924,6.91e-15,95;UBERON:0006601,6.91e-15,95;UBERON:0003528,5.99e-14,29;UBERON:0002791,5.99e-14,29;UBERON:0001893,5.99e-14,29;UBERON:0002616,2.21e-13,46;UBERON:0000955,5.22e-13,47;UBERON:0006238,5.22e-13,47;UBERON:0002346,1.90e-12,64;UBERON:0003075,1.90e-12,64;UBERON:0007284,1.90e-12,64;UBERON:0000956,2.57e-12,21;UBERON:0001869,2.57e-12,21;UBERON:0000203,2.57e-12,21;UBERON:0002780,4.52e-11,39;UBERON:0001890,4.52e-11,39;UBERON:0006240,4.52e-11,39;UBERON:0003080,1.04e-10,40;UBERON:0010371,2.55e-10,73;UBERON:0003056,3.86e-08,49;UBERON:0010314,3.20e-07,92;UBERON:0003076,5.87e-07,12;UBERON:0003057,5.87e-07,12|phase1_expression=0.320297694209588,1.39590163055744,0,0.60492842261366,0,0.16787927191189,0.233612640595526,0,0.422366166455,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,1.43993180514066,1.60586496747019,0,0.430761996159075,0.646413698057667,0.190023419456374,0,0,0,0,0,0.288851619751275,0.498703936075477,0.204169356262369,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0,0.782391344348039,5.45062890951116,2.41654801007919,4.08302788055995,2.65974201088189,8.62515386189829,0,0,0,0.257259436035947,0.286533439938757,0,1.01158230429799,0,0,1.0165335962074,2.66788438833342,1.3498495759221,0,3.5524005747305,8.98800331555214,14.2160772968975,0.622137673850866,0.675029691658453,0.630974884054146,3.71346279724945,1.98781686856452,0.61245399607477,0.575072826109418,0.919218786610021,2.20231761998777,1.91531007127782,0.921639199537461,0.791317726381163,0.548925861614458,1.04182674111352,7.81712397203867,0.56276261003168,2.44477196442896,2.94628585473668,0.996601765593721,0.559198337475902,0.302904773332736,0.377857800533928,0.579728977403356,0,0,0,0,0,0,0,0,0.35333957451034,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0,0,0,0,0,0.247194967734374,0,0,0.161766849947409,0,0,0,1.17112318804619,0.83778682725382,0,0,0,0,0.748953197024114,0.915001205637253,0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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=303 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:112909692..112909703,- | |||
|description=CAGE_peak_at_chr12:112909692..112909703,- | |||
|id=chr12:112909692..112909703,- | |||
|ontology_enrichment_celltype=CL:0000221!1.92e-23!44;CL:0000133!1.92e-23!44;CL:0002319!2.29e-23!43;CL:0000055!5.85e-22!50;CL:0002321!1.41e-18!70;CL:0000220!1.41e-18!70;CL:0000540!1.42e-15!33;CL:0000047!1.42e-15!33;CL:0000031!1.42e-15!33;CL:0000404!1.42e-15!33;CL:0000393!3.73e-15!39;CL:0000211!3.73e-15!39;CL:0000117!5.01e-13!23;CL:0000337!5.01e-13!23;CL:0000548!5.92e-12!115;CL:0000004!5.92e-12!115;CL:0000255!5.92e-12!115;CL:0002371!4.15e-11!118;CL:0000144!2.58e-10!121;CL:0000012!2.58e-10!121;CL:0000333!6.39e-09!10;CL:0000095!6.39e-09!10;CL:0000243!6.39e-09!10;CL:0000123!6.39e-09!10;CL:0000125!6.39e-09!10;CL:0000030!6.39e-09!10;CL:0000339!6.39e-09!10;CL:0002453!2.60e-08!8;CL:0000723!4.31e-07!91;CL:0000048!4.31e-07!91;CL:0000034!8.90e-07!97 | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,2.83e-16,8;CL:0000333,8.73e-13,10;CL:0000095,8.73e-13,10;CL:0000243,8.73e-13,10;CL:0000123,8.73e-13,10;CL:0000125,8.73e-13,10;CL:0000030,8.73e-13,10;CL:0000339,8.73e-13,10;CL:0002319,5.74e-12,43;CL:0000221,1.31e-11,44;CL:0000133,1.31e-11,44;CL:0000128,3.03e-11,6;CL:0000126,3.03e-11,6;CL:0000127,3.03e-11,6;CL:0002194,1.32e-10,4;CL:0000766,1.32e-10,4;CL:0000234,1.32e-10,4;CL:0000576,1.32e-10,4;CL:0000235,1.32e-10,4;CL:0000864,1.32e-10,4;CL:0002009,1.32e-10,4;CL:0000040,1.32e-10,4;CL:0000559,1.32e-10,4;CL:0000117,3.14e-07,23;CL:0000337,3.14e-07,23;CL:0002321,7.09e-07,70;CL:0000878,8.43e-07,2;CL:0000129,8.43e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.09e-31!75;UBERON:0001016!1.09e-31!75;UBERON:0001017!1.19e-30!73;UBERON:0005743!1.19e-30!73;UBERON:0004121!1.97e-24!102;UBERON:0000924!1.97e-24!102;UBERON:0006601!1.97e-24!102;UBERON:0001049!3.51e-21!52;UBERON:0005068!3.51e-21!52;UBERON:0006241!3.51e-21!52;UBERON:0007135!3.51e-21!52;UBERON:0000955!9.11e-20!50;UBERON:0006238!9.11e-20!50;UBERON:0000033!9.62e-20!63;UBERON:0002346!9.68e-20!71;UBERON:0003075!9.68e-20!71;UBERON:0007284!9.68e-20!71;UBERON:0002020!3.33e-19!34;UBERON:0002616!4.23e-19!49;UBERON:0002791!1.83e-15!29;UBERON:0003528!1.83e-15!29;UBERON:0001893!1.83e-15!29;UBERON:0003056!1.06e-13!49;UBERON:0003080!5.60e-13!40;UBERON:0002780!2.05e-12!39;UBERON:0001890!2.05e-12!39;UBERON:0006240!2.05e-12!39;UBERON:0000956!7.95e-11!21;UBERON:0001869!7.95e-11!21;UBERON:0000203!7.95e-11!21;UBERON:0007811!2.18e-10!86;UBERON:0003076!1.36e-09!12;UBERON:0003057!1.36e-09!12;UBERON:0002619!1.04e-08!17;UBERON:0000153!3.94e-08!94;UBERON:0002021!2.42e-07!10;UBERON:0000411!2.42e-07!10;UBERON:0001950!2.42e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.89e-21,73;UBERON:0001016,1.57e-20,75;UBERON:0000073,2.34e-19,54;UBERON:0002021,1.18e-18,10;UBERON:0000411,1.18e-18,10;UBERON:0001950,1.18e-18,10;UBERON:0002020,1.05e-17,34;UBERON:0001049,1.92e-16,52;UBERON:0005068,1.92e-16,52;UBERON:0006241,1.92e-16,52;UBERON:0007135,1.92e-16,52;UBERON:0002619,9.32e-16,17;UBERON:0004121,6.91e-15,95;UBERON:0000924,6.91e-15,95;UBERON:0006601,6.91e-15,95;UBERON:0003528,5.99e-14,29;UBERON:0002791,5.99e-14,29;UBERON:0001893,5.99e-14,29;UBERON:0002616,2.21e-13,46;UBERON:0000955,5.22e-13,47;UBERON:0006238,5.22e-13,47;UBERON:0002346,1.90e-12,64;UBERON:0003075,1.90e-12,64;UBERON:0007284,1.90e-12,64;UBERON:0000956,2.57e-12,21;UBERON:0001869,2.57e-12,21;UBERON:0000203,2.57e-12,21;UBERON:0002780,4.52e-11,39;UBERON:0001890,4.52e-11,39;UBERON:0006240,4.52e-11,39;UBERON:0003080,1.04e-10,40;UBERON:0010371,2.55e-10,73;UBERON:0003056,3.86e-08,49;UBERON:0010314,3.20e-07,92;UBERON:0003076,5.87e-07,12;UBERON:0003057,5.87e-07,12 | |||
|phase1_expression=0.320297694209588,1.39590163055744,0,0.60492842261366,0,0.16787927191189,0.233612640595526,0,0.422366166455,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,1.43993180514066,1.60586496747019,0,0.430761996159075,0.646413698057667,0.190023419456374,0,0,0,0,0,0.288851619751275,0.498703936075477,0.204169356262369,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0,0.782391344348039,5.45062890951116,2.41654801007919,4.08302788055995,2.65974201088189,8.62515386189829,0,0,0,0.257259436035947,0.286533439938757,0,1.01158230429799,0,0,1.0165335962074,2.66788438833342,1.3498495759221,0,3.5524005747305,8.98800331555214,14.2160772968975,0.622137673850866,0.675029691658453,0.630974884054146,3.71346279724945,1.98781686856452,0.61245399607477,0.575072826109418,0.919218786610021,2.20231761998777,1.91531007127782,0.921639199537461,0.791317726381163,0.548925861614458,1.04182674111352,7.81712397203867,0.56276261003168,2.44477196442896,2.94628585473668,0.996601765593721,0.559198337475902,0.302904773332736,0.377857800533928,0.579728977403356,0,0,0,0,0,0,0,0,0.35333957451034,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0,0,0,0,0,0.247194967734374,0,0,0.161766849947409,0,0,0,1.17112318804619,0.83778682725382,0,0,0,0,0.748953197024114,0.915001205637253,0.125654352112864,0.521472960576829,0.255715457330331,1.24672826735736,0.324482526135515,0.101839363850316,0,0,0,0.130120442962704,0.229902104433473,0.360124259610698,0.150704817835715,0.0680364991513279,0.384341160854549,0.281105173679186,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0.232533944750408,0.268273401399619,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0,0.190225626112559,0,0,0,0,0,0,0.432276099749388,0,0,0.114248512609729,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50791283939272,1.08781136763742,0,0,1.12385412991454,0.703270119553219,0,0,0.315508219416257,0.390438744296638,0.430846795465598,0.238968797952552,0.222798674082394,0.283076530788832,0.404810701674894,0.292255857911312,0,0.963963949265421,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0.164549020602121,0,0,0.21183207086382,0,0,0,0,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0.165306911450672,0.26175594198403,0,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443971906748129,0.269141569828427,0,0.19318959403219,0,0.183151624267265,0,0,0,1.38097570952153,1.14579102687879,1.3748254587495,2.05524755931193,1.5107877947794,1.35004500046361,4.5032120322422,4.07828168085784,4.14208249401456,0,0,0.170733605754134,0,0,0,0.222246727801615,0,0,0.252697211763798,0,0,0.0936415074698824,0,0.17230640686684,0,0,0,0.412085900803307,0.147198920134397,0,0,0.238436189947321,0.145346416632329,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0,0,0,0.0985044823755635,0,0,0,0.249810577937946,0,0,0,0.220591419119515,0.231867835620421 | |||
|short_description=p@chr12:112909692..112909703,- | |||
}} |
Latest revision as of 18:34, 4 August 2015
Short description: | p@chr12:112909692..112909703, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:112909692..112909703, - |
Coexpression cluster: | MCL_coexpression_mm9:303 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 2.83e-16 | 8 |
migratory neural crest cell | 8.73e-13 | 10 |
neuron associated cell | 8.73e-13 | 10 |
glial cell (sensu Vertebrata) | 8.73e-13 | 10 |
neuron associated cell (sensu Vertebrata) | 8.73e-13 | 10 |
glial cell | 8.73e-13 | 10 |
glioblast | 8.73e-13 | 10 |
glioblast (sensu Vertebrata) | 8.73e-13 | 10 |
neural cell | 5.74e-12 | 43 |
ectodermal cell | 1.31e-11 | 44 |
neurectodermal cell | 1.31e-11 | 44 |
oligodendrocyte | 3.03e-11 | 6 |
macroglial cell | 3.03e-11 | 6 |
astrocyte | 3.03e-11 | 6 |
monopoietic cell | 1.32e-10 | 4 |
myeloid leukocyte | 1.32e-10 | 4 |
phagocyte | 1.32e-10 | 4 |
monocyte | 1.32e-10 | 4 |
macrophage | 1.32e-10 | 4 |
tissue-resident macrophage | 1.32e-10 | 4 |
macrophage dendritic cell progenitor | 1.32e-10 | 4 |
monoblast | 1.32e-10 | 4 |
promonocyte | 1.32e-10 | 4 |
CNS neuron (sensu Vertebrata) | 3.14e-07 | 23 |
neuroblast (sensu Vertebrata) | 3.14e-07 | 23 |
embryonic cell | 7.09e-07 | 70 |
central nervous system macrophage | 8.43e-07 | 2 |
microglial cell | 8.43e-07 | 2 |