FFCP PHASE1:Mm9::chr9:122203527..122203549,-: Difference between revisions
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{{FFCP|EntrezGene=102566|HGNC=|MCL_coexpression_id=0|UniProt=Q8BH79|association_with_transcript=-35bp_to_ENSMUST00000042546,ENSMUST00000111499,NM_133979,uc009ser.1,uc009ses.1,uc009set.1_5end|description=CAGE_peak_2_at_Ano10_5end|id=chr9:122203527..122203549,-|ontology_enrichment_celltype=CL:0000055!1.60e-13!50;CL:0002319!1.29e-12!43;CL:0000221!2.55e-12!44;CL:0000133!2.55e-12!44;CL:0000393!2.11e-11!39;CL:0000211!2.11e-11!39;CL:0000540!3.21e-10!33;CL:0000047!3.21e-10!33;CL:0000031!3.21e-10!33;CL:0000404!3.21e-10!33;CL:0000117!4.28e-10!23;CL:0000337!4.28e-10!23;CL:0002321!1.85e-09!70;CL:0000220!1.85e-09!70|ontology_enrichment_celltype_v019_2=CL:0002319,1.29e-12,43;CL:0000221,2.55e-12,44;CL:0000133,2.55e-12,44;CL:0000393,2.11e-11,39;CL:0000211,2.11e-11,39;CL:0000540,3.21e-10,33;CL:0000047,3.21e-10,33;CL:0000031,3.21e-10,33;CL:0000404,3.21e-10,33;CL:0000117,4.28e-10,23;CL:0000337,4.28e-10,23;CL:0002321,1.90e-09,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!5.44e-20!102;UBERON:0000924!5.44e-20!102;UBERON:0006601!5.44e-20!102;UBERON:0000073!1.71e-19!75;UBERON:0001016!1.71e-19!75;UBERON:0001017!2.56e-19!73;UBERON:0005743!2.56e-19!73;UBERON:0002346!8.53e-16!71;UBERON:0003075!8.53e-16!71;UBERON:0007284!8.53e-16!71;UBERON:0001049!4.95e-15!52;UBERON:0005068!4.95e-15!52;UBERON:0006241!4.95e-15!52;UBERON:0007135!4.95e-15!52;UBERON:0002020!1.16e-13!34;UBERON:0000955!3.94e-13!50;UBERON:0006238!3.94e-13!50;UBERON:0002616!4.82e-13!49;UBERON:0000033!7.86e-12!63;UBERON:0002791!4.39e-11!29;UBERON:0003528!4.39e-11!29;UBERON:0001893!4.39e-11!29;UBERON:0003080!1.91e-10!40;UBERON:0002780!4.41e-10!39;UBERON:0001890!4.41e-10!39;UBERON:0006240!4.41e-10!39;UBERON:0003056!4.79e-10!49;UBERON:0000956!1.31e-07!21;UBERON:0001869!1.31e-07!21;UBERON:0000203!1.31e-07!21;UBERON:0002619!6.40e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.71e-19,75;UBERON:0001017,2.56e-19,73;UBERON:0004121,1.68e-18,95;UBERON:0000924,1.68e-18,95;UBERON:0006601,1.68e-18,95;UBERON:0000073,1.32e-15,54;UBERON:0001049,4.95e-15,52;UBERON:0005068,4.95e-15,52;UBERON:0006241,4.95e-15,52;UBERON:0007135,4.95e-15,52;UBERON:0002346,1.45e-14,64;UBERON:0003075,1.45e-14,64;UBERON:0007284,1.45e-14,64;UBERON:0002020,1.16e-13,34;UBERON:0010371,1.61e-13,73;UBERON:0010314,4.66e-13,92;UBERON:0000955,4.76e-12,47;UBERON:0006238,4.76e-12,47;UBERON:0002616,5.81e-12,46;UBERON:0003528,4.38e-11,29;UBERON:0002791,4.38e-11,29;UBERON:0001893,4.38e-11,29;UBERON:0003080,1.91e-10,40;UBERON:0002780,4.41e-10,39;UBERON:0001890,4.41e-10,39;UBERON:0006240,4.41e-10,39;UBERON:0003056,4.79e-10,49;UBERON:0000956,1.31e-07,21;UBERON:0001869,1.31e-07,21;UBERON:0000203,1.31e-07,21;UBERON:0002619,6.40e-07,17|phase1_expression=3.52327463630547,4.88565570695105,3.63999391511629,4.83942738090928,2.00358291978539,3.18970616632591,3.97141489012394,3.22808308603941,0.281577444303333,1.40438715793196,0.856089841127525,0.638177271962691,2.56801094896809,4.72070173062586,0.666219523631325,1.01237633694913,1.39912375625629,4.41647031501533,3.97631857456642,3.39511721438424,18.6244805430843,2.08510997521859,3.91799683708403,6.39969691173627,6.8822784320151,4.59385571292016,4.30761996159075,3.01659725760245,3.04037471130198,1.76421090831952,3.99114919179548,0,1.23012957516914,0,0.866554859253824,1.66234645358492,1.42918549383658,17.996860121687,17.1893775795236,22.5115209908733,27.6468799374577,24.589637458504,21.8479658864019,4.78407908307194,3.64956952390252,5.50640256485045,6.25913075478431,8.28495594245697,10.7646229539891,10.1103547518627,9.79904951377538,7.18762821824858,4.02678254538567,5.80289713609076,2.68875039313971,6.43148590089868,6.5902691185914,7.73508138416164,10.3181395038395,8.99284664762456,12.6766280701236,8.13226876965917,12.450127145556,3.1496490104849,3.9554654502679,0.7104801149461,4.49400165777607,2.68952813725088,5.39185984004084,5.13022565660425,5.46844899513593,8.56952953211411,7.95126747425809,5.63457676388789,4.79227355091182,4.5960939330501,7.70811166995721,5.36286819957788,6.60508093001847,10.9465618816061,9.88066550906024,7.29278718779464,6.97957497503452,6.75315132038016,8.09830713217094,10.9012576625257,6.12198227436143,10.4383689662168,4.16494063332512,5.44115232768856,3.18850937571846,3.44169550792555,2.719885334831,3.2382191498269,3.89865850468601,2.68816132258401,3.37066608316204,4.26075806445144,3.37721805983729,3.18005617059306,3.66192891419369,8.98285341900225,17.8363667794652,7.11066703153331,3.24736561516821,3.29367825117628,5.56076889516262,4.68153906848146,4.91981978929626,6.23456984072264,2.25530924795977,7.00270600117925,5.76538743140146,4.82312449768392,6.11461277105665,5.6549966098354,6.17987419335935,6.94076913215576,6.19227386364912,5.98537344805414,3.3126227769059,2.90925151881133,1.86391761218122,5.5628351432194,2.93225389538837,2.29911349687732,1.31796636956512,1.19980546198682,1.39777249780371,6.44099749440738,5.03250663100489,7.16229807043327,5.56237824615285,2.04572365864264,5.194701113989,3.8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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:102566 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8BH79 | |||
|association_with_transcript=-35bp_to_ENSMUST00000042546,ENSMUST00000111499,NM_133979,uc009ser.1,uc009ses.1,uc009set.1_5end | |||
|cluster_id=chr9:122203527..122203549,- | |||
|description=CAGE_peak_2_at_Ano10_5end | |||
|id=chr9:122203527..122203549,- | |||
|ontology_enrichment_celltype=CL:0000055!1.60e-13!50;CL:0002319!1.29e-12!43;CL:0000221!2.55e-12!44;CL:0000133!2.55e-12!44;CL:0000393!2.11e-11!39;CL:0000211!2.11e-11!39;CL:0000540!3.21e-10!33;CL:0000047!3.21e-10!33;CL:0000031!3.21e-10!33;CL:0000404!3.21e-10!33;CL:0000117!4.28e-10!23;CL:0000337!4.28e-10!23;CL:0002321!1.85e-09!70;CL:0000220!1.85e-09!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.29e-12,43;CL:0000221,2.55e-12,44;CL:0000133,2.55e-12,44;CL:0000393,2.11e-11,39;CL:0000211,2.11e-11,39;CL:0000540,3.21e-10,33;CL:0000047,3.21e-10,33;CL:0000031,3.21e-10,33;CL:0000404,3.21e-10,33;CL:0000117,4.28e-10,23;CL:0000337,4.28e-10,23;CL:0002321,1.90e-09,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!5.44e-20!102;UBERON:0000924!5.44e-20!102;UBERON:0006601!5.44e-20!102;UBERON:0000073!1.71e-19!75;UBERON:0001016!1.71e-19!75;UBERON:0001017!2.56e-19!73;UBERON:0005743!2.56e-19!73;UBERON:0002346!8.53e-16!71;UBERON:0003075!8.53e-16!71;UBERON:0007284!8.53e-16!71;UBERON:0001049!4.95e-15!52;UBERON:0005068!4.95e-15!52;UBERON:0006241!4.95e-15!52;UBERON:0007135!4.95e-15!52;UBERON:0002020!1.16e-13!34;UBERON:0000955!3.94e-13!50;UBERON:0006238!3.94e-13!50;UBERON:0002616!4.82e-13!49;UBERON:0000033!7.86e-12!63;UBERON:0002791!4.39e-11!29;UBERON:0003528!4.39e-11!29;UBERON:0001893!4.39e-11!29;UBERON:0003080!1.91e-10!40;UBERON:0002780!4.41e-10!39;UBERON:0001890!4.41e-10!39;UBERON:0006240!4.41e-10!39;UBERON:0003056!4.79e-10!49;UBERON:0000956!1.31e-07!21;UBERON:0001869!1.31e-07!21;UBERON:0000203!1.31e-07!21;UBERON:0002619!6.40e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.71e-19,75;UBERON:0001017,2.56e-19,73;UBERON:0004121,1.68e-18,95;UBERON:0000924,1.68e-18,95;UBERON:0006601,1.68e-18,95;UBERON:0000073,1.32e-15,54;UBERON:0001049,4.95e-15,52;UBERON:0005068,4.95e-15,52;UBERON:0006241,4.95e-15,52;UBERON:0007135,4.95e-15,52;UBERON:0002346,1.45e-14,64;UBERON:0003075,1.45e-14,64;UBERON:0007284,1.45e-14,64;UBERON:0002020,1.16e-13,34;UBERON:0010371,1.61e-13,73;UBERON:0010314,4.66e-13,92;UBERON:0000955,4.76e-12,47;UBERON:0006238,4.76e-12,47;UBERON:0002616,5.81e-12,46;UBERON:0003528,4.38e-11,29;UBERON:0002791,4.38e-11,29;UBERON:0001893,4.38e-11,29;UBERON:0003080,1.91e-10,40;UBERON:0002780,4.41e-10,39;UBERON:0001890,4.41e-10,39;UBERON:0006240,4.41e-10,39;UBERON:0003056,4.79e-10,49;UBERON:0000956,1.31e-07,21;UBERON:0001869,1.31e-07,21;UBERON:0000203,1.31e-07,21;UBERON:0002619,6.40e-07,17 | |||
|phase1_expression=3.52327463630547,4.88565570695105,3.63999391511629,4.83942738090928,2.00358291978539,3.18970616632591,3.97141489012394,3.22808308603941,0.281577444303333,1.40438715793196,0.856089841127525,0.638177271962691,2.56801094896809,4.72070173062586,0.666219523631325,1.01237633694913,1.39912375625629,4.41647031501533,3.97631857456642,3.39511721438424,18.6244805430843,2.08510997521859,3.91799683708403,6.39969691173627,6.8822784320151,4.59385571292016,4.30761996159075,3.01659725760245,3.04037471130198,1.76421090831952,3.99114919179548,0,1.23012957516914,0,0.866554859253824,1.66234645358492,1.42918549383658,17.996860121687,17.1893775795236,22.5115209908733,27.6468799374577,24.589637458504,21.8479658864019,4.78407908307194,3.64956952390252,5.50640256485045,6.25913075478431,8.28495594245697,10.7646229539891,10.1103547518627,9.79904951377538,7.18762821824858,4.02678254538567,5.80289713609076,2.68875039313971,6.43148590089868,6.5902691185914,7.73508138416164,10.3181395038395,8.99284664762456,12.6766280701236,8.13226876965917,12.450127145556,3.1496490104849,3.9554654502679,0.7104801149461,4.49400165777607,2.68952813725088,5.39185984004084,5.13022565660425,5.46844899513593,8.56952953211411,7.95126747425809,5.63457676388789,4.79227355091182,4.5960939330501,7.70811166995721,5.36286819957788,6.60508093001847,10.9465618816061,9.88066550906024,7.29278718779464,6.97957497503452,6.75315132038016,8.09830713217094,10.9012576625257,6.12198227436143,10.4383689662168,4.16494063332512,5.44115232768856,3.18850937571846,3.44169550792555,2.719885334831,3.2382191498269,3.89865850468601,2.68816132258401,3.37066608316204,4.26075806445144,3.37721805983729,3.18005617059306,3.66192891419369,8.98285341900225,17.8363667794652,7.11066703153331,3.24736561516821,3.29367825117628,5.56076889516262,4.68153906848146,4.91981978929626,6.23456984072264,2.25530924795977,7.00270600117925,5.76538743140146,4.82312449768392,6.11461277105665,5.6549966098354,6.17987419335935,6.94076913215576,6.19227386364912,5.98537344805414,3.3126227769059,2.90925151881133,1.86391761218122,5.5628351432194,2.93225389538837,2.29911349687732,1.31796636956512,1.19980546198682,1.39777249780371,6.44099749440738,5.03250663100489,7.16229807043327,5.56237824615285,2.04572365864264,5.194701113989,3.89379031362618,3.7680564624617,3.98102305952298,5.81262344397452,4.41927897361595,3.6433724029557,4.13823787980251,4.14142898552303,5.27466862425003,4.28629944653366,4.86832137082429,4.59138450342671,3.88055056108524,2.37124792226126,2.45837904218165,3.16712023495108,4.16471891612392,4.72680323683516,4.179025998266,4.11564272815887,3.38358253591438,1.40442637462647,2.05878325691772,0.852490498186778,3.10688658803253,3.75241695969754,5.58192390529146,5.68187365404505,3.54175617145327,4.62801338662135,1.86027155800326,4.29237442239391,3.15266424391358,2.46839774870221,2.95501435342371,2.35099547682982,2.77779976108131,3.29325172936576,3.22095405024892,4.83666881697493,5.76265829323993,3.63460661282178,3.17340679996253,2.55945900642281,3.0190767341857,1.54640953586512,3.42861991859682,3.11329261382818,2.28270751335071,2.37264530772256,3.62337700392824,4.27269854960458,4.97391180102877,2.33956904542944,5.39291645192533,3.8904848977445,2.58883655230677,1.89667900953082,2.97046132785295,1.1270773567308,3.25842124552503,4.07300223052014,3.08597607517402,3.79419222745544,3.54264355151045,4.08196692387575,2.83813477020141,1.1858105083486,1.33476084572875,2.16214894624523,0.899448449539415,1.82574109249653,1.4470629585145,2.29163266603278,2.87696137450811,2.2698931748505,1.64736847912849,2.87536413054709,4.46569137202204,2.49630138491648,3.03094653536534,2.51156378930677,2.41221760681684,5.17308932466493,2.08440552947533,2.60743962307241,4.58311731593008,3.52035372432753,3.68513766371995,3.57065461329021,3.31727201358258,4.57141917907954,5.53661724121937,3.98636921643718,4.58817281204066,4.31712454664739,4.62876987460837,3.01582567878545,7.07077388964322,1.96705709207614,5.51873492609465,10.4357883492065,6.68106613575558,1.96721934452011,3.53459298086122,6.62567260774139,2.73307121007647,5.17016154558717,5.73525115086125,5.12436950389506,5.66153061577665,4.45291771842384,6.13737301613755,4.34816555741176,4.81981974632711,5.10984306749767,4.45164009168138,3.74640006513225,3.29940245945071,0,2.6705869977048,1.209294227859,2.82907619633847,2.95301892880773,3.3817866273832,3.10113951801865,3.99887102425256,2.85197902707777,0.948110273807448,1.05418608574999,1.03135543248187,4.08527526904546,3.78128297465751,5.30370603509293,4.07240366560025,3.3694644392032,4.8159580752559,5.43011767986999,3.95804433848979,4.22409074514679,6.56679419677843,3.52845436887939,5.60613260001032,5.32832608096488,3.73940134554566,4.29740438411291,3.11867709515616,4.08073171281791,9.08583979851498,3.2465467351592,2.68302928352189,2.96311243791539,0.565105371014073,1.23024804948923,1.14389086603261,1.69978429993855,2.23922323717853,1.79659965945751,6.68269432610579,2.68885594543965,2.23651413839534,3.67218158794124,2.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| |||
|short_description=p2@Ano10 | |||
}} |
Revision as of 18:45, 4 August 2015
Short description: | p2@Ano10 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ano10_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | -35bp_to_ENSMUST00000042546, ENSMUST00000111499, NM_133979, uc009ser.1, uc009ses.1, uc009set.1_5end |
EntrezGene: | 102566 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.29e-12 | 43 |
ectodermal cell | 2.55e-12 | 44 |
neurectodermal cell | 2.55e-12 | 44 |
electrically responsive cell | 2.11e-11 | 39 |
electrically active cell | 2.11e-11 | 39 |
neuron | 3.21e-10 | 33 |
neuronal stem cell | 3.21e-10 | 33 |
neuroblast | 3.21e-10 | 33 |
electrically signaling cell | 3.21e-10 | 33 |
CNS neuron (sensu Vertebrata) | 4.28e-10 | 23 |
neuroblast (sensu Vertebrata) | 4.28e-10 | 23 |
embryonic cell | 1.90e-09 | 70 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.71e-19 | 75 |
central nervous system | 2.56e-19 | 73 |
ectoderm-derived structure | 1.68e-18 | 95 |
ectoderm | 1.68e-18 | 95 |
presumptive ectoderm | 1.68e-18 | 95 |
regional part of nervous system | 1.32e-15 | 54 |
neural tube | 4.95e-15 | 52 |
neural rod | 4.95e-15 | 52 |
future spinal cord | 4.95e-15 | 52 |
neural keel | 4.95e-15 | 52 |
neurectoderm | 1.45e-14 | 64 |
neural plate | 1.45e-14 | 64 |
presumptive neural plate | 1.45e-14 | 64 |
gray matter | 1.16e-13 | 34 |
ecto-epithelium | 1.61e-13 | 73 |
structure with developmental contribution from neural crest | 4.66e-13 | 92 |
brain | 4.76e-12 | 47 |
future brain | 4.76e-12 | 47 |
regional part of brain | 5.81e-12 | 46 |
brain grey matter | 4.38e-11 | 29 |
regional part of telencephalon | 4.38e-11 | 29 |
telencephalon | 4.38e-11 | 29 |
anterior neural tube | 1.91e-10 | 40 |
regional part of forebrain | 4.41e-10 | 39 |
forebrain | 4.41e-10 | 39 |
future forebrain | 4.41e-10 | 39 |
pre-chordal neural plate | 4.79e-10 | 49 |
cerebral cortex | 1.31e-07 | 21 |
cerebral hemisphere | 1.31e-07 | 21 |
pallium | 1.31e-07 | 21 |
regional part of cerebral cortex | 6.40e-07 | 17 |