FFCP PHASE1:Mm9::chr1:135811969..135811982,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=148 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:135811969..135811982,- | |||
|description=CAGE_peak_at_chr1:135811969..135811982,- | |description=CAGE_peak_at_chr1:135811969..135811982,- | ||
|id=chr1:135811969..135811982,- | |id=chr1:135811969..135811982,- | ||
|ontology_enrichment_celltype=CL:0000055!7.76e-09!50;CL:0002453!2.10e-07!8;CL:0002321!3.47e-07!70;CL:0000220!3.47e-07!70 | |ontology_enrichment_celltype=CL:0000055!7.76e-09!50;CL:0002453!2.10e-07!8;CL:0002321!3.47e-07!70;CL:0000220!3.47e-07!70 | ||
|ontology_enrichment_celltype_v019_2=CL:0002453,4.56e-19,8;CL:0000222,6.92e-17,7;CL:0000128,5.10e-15,6;CL:0000126,5.10e-15,6;CL:0000127,5.10e-15,6;CL:0000333,5.99e-15,10;CL:0000095,5.99e-15,10;CL:0000243,5.99e-15,10;CL:0000123,5.99e-15,10;CL:0000125,5.99e-15,10;CL:0000030,5.99e-15,10;CL:0000339,5.99e-15,10;CL:0000680,7.07e-15,6;CL:0000187,7.07e-15,6;CL:0000056,7.07e-15,6;CL:0000355,1.21e-09,9;CL:0002321,3.10e-09,70;CL:0000192,2.78e-08,3;CL:0000359,2.78e-08,3;CL:0002539,2.78e-08,3;CL:0000514,2.78e-08,3;CL:0002494,3.28e-08,3;CL:0000737,3.28e-08,3;CL:0000746,3.28e-08,3;CL:0000513,3.28e-08,3;CL:0002092,4.04e-07,3;CL:0002540,4.04e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,1.70e-12,5;UBERON:0007500,1.70e-12,5;UBERON:0001981,1.70e-12,5;UBERON:0002049,1.70e-12,5;UBERON:0007798,1.70e-12,5;UBERON:0004537,1.70e-12,5;UBERON:0006965,1.70e-12,5;UBERON:0000383,3.87e-11,10;UBERON:0000947,1.70e-10,4;UBERON:0001637,1.70e-10,4;UBERON:0004573,1.70e-10,4;UBERON:0003509,1.70e-10,4;UBERON:0004571,1.70e-10,4;UBERON:0010191,1.70e-10,4;UBERON:0004572,1.70e-10,4;UBERON:0001134,1.21e-09,9;UBERON:0002036,1.21e-09,9;UBERON:0002385,1.21e-09,9;UBERON:0000486,1.21e-09,9;UBERON:0007503,1.21e-09,9;UBERON:0001015,1.21e-09,9;UBERON:0002329,1.21e-09,9;UBERON:0003082,1.21e-09,9;UBERON:0003059,1.21e-09,9;UBERON:0007282,1.21e-09,9;UBERON:0004290,1.21e-09,9;UBERON:0009618,1.21e-09,9;UBERON:0002204,1.38e-09,32;UBERON:0001135,2.78e-08,3;UBERON:0004237,2.78e-08,3;UBERON:0004695,2.78e-08,3;UBERON:0002111,2.78e-08,3;UBERON:0004178,2.78e-08,3;UBERON:0007524,9.72e-08,11;UBERON:0003077,9.72e-08,11;UBERON:0007285,9.72e-08,11 | |||
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|phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0.831173226792462,0.816677425049476,0,0,0,0,0,0,19.1363163322877,21.4919094185371,3.30384153891027,5.47673941043627,5.45062890951116,27.6804590245434,85.9380153908333,4.61955191363696,5.75010257459886,0,0,0,4.3734104126111,17.1920063963254,7.21940929188419,0.202316460859598,0,0,0.338844532069132,0,1.3498495759221,1.97773272513395,2.8419204597844,1.79760066311043,12.2949857702897,0,0.270011876663381,0,0.571301968807607,0.220868540951614,0,0,0,0,0.127687338085188,0.46081959976873,0.263772575460388,0.457438218012048,0,1.11673199600552,0.56276261003168,0.30559649555362,0.294628585473668,0.284743361598206,0.372798891650601,0,0,3.47837386442013,0.860423876981386,0,0.539703191637817,0,0.896053774194671,0.140444420131752,5.28333999991979,4.41636207824877,3.5333957451034,0,30.7983545794363,12.7402619853323,0,0,0,0,0.11418387971906,0,0.445326417194474,0,0,0.461230994512117,0,0.117588707135705,0.251333182659351,0.247194967734374,6.94076913215576,0,0.323533699894818,0.662524555381181,1.93950101254089,1.86391761218122,0.292780797011547,0.41889341362691,0,0,0,0,0.149790639404823,0,0,0,0,0.20778804455956,0,0.101839363850316,0.746441823660558,0,0.631325567659422,0,0,0,0.150704817835715,0,0.12811372028485,0.0937017245597288,0.517406741478031,0,0.189106080167819,0.703804496655795,0.219195732427575,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0.154267112887378,0,0,0,0,0.164167464079095,0.324275238183423,0.438599962275997,0.219550115291051,0.536825675041487,0.210289948564127,0.102904612379284,0,0.793351699990633,0,0,0,0,0.22237804384487,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0.287696137450811,0.324270453550071,0,2.87536413054709,0,0.624075346229121,0,0.358794827043824,0.482443521363367,2.21703828199926,0,0,0.509235257325564,0.469380496577004,0.335012514883631,0,0.195133647857799,0,0.221464689648775,0.318909537314974,2.29408640602033,1.03610989119537,1.44649058581512,0,0,0.983528546038072,0.827810238914197,0,0.117211686592203,0,1.00988370881749,0.94652465824877,0.780877488593277,0.646270193198397,0.716906393857656,0.222798674082394,0,0.404810701674894,1.16902343164525,1.18586333383957,0.321321316421807,0.425820255624806,0,0,1.15479086080775,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0.340439605753788,0,0,0,0.177340233642274,0.178368817602071,0.493647061806363,0.304464949114599,0.469343416127421,0,0.220528398054962,1.31909002353184,0.161464426695906,0.120625849856312,0.238744688006273,0,0,0.370850604021019,0,0.412773735926445,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0.209088296014469,0.218362563746178,0.269728692769641,0.0826534557253359,0.26175594198403,0.259229946583586,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0.288030006257865,0,0,0.102710957164827,0,0,0,0,0,0.100966449948148,0,0,0.0974578807397524,0,0,0.226730383615211,0,0,0,2.31827512838629,1.50145980360946,0.36630324853453,0,0,0,0.460325236507177,0,0,0.685082519770642,0.755393897389701,0,0.45032120322422,0.906284817968409,0.51776031175182,0,0,0,0,0,0.183843508450014,0.222246727801615,0.618105171716683,0,0.252697211763798,0,0.188626341386076,0.37456602987953,0.384150914429216,0.114870937911227,0,0,0.192909220463705,0.412085900803307,0.441596760403192,0.342869252385415,0.177475806159338,0,0,0.282328141245992,0.169229215783353,0.182927972872773,0,0.543216455383447,0,0.118635018124174,0.197008964751127,0.409231043169689,0,0.385813221962283,0.499621155875892,0.233931608445408,0.859484216193193,1.3390183244819,0.882365676478062,0.927471342481686 | ||
|short_description=p@chr1:135811969..135811982,- | |short_description=p@chr1:135811969..135811982,- | ||
}} | }} |
Latest revision as of 19:49, 4 August 2015
Short description: | p@chr1:135811969..135811982, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:135811969..135811982, - |
Coexpression cluster: | MCL_coexpression_mm9:148 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 4.56e-19 | 8 |
mesodermal cell | 6.92e-17 | 7 |
oligodendrocyte | 5.10e-15 | 6 |
macroglial cell | 5.10e-15 | 6 |
astrocyte | 5.10e-15 | 6 |
migratory neural crest cell | 5.99e-15 | 10 |
neuron associated cell | 5.99e-15 | 10 |
glial cell (sensu Vertebrata) | 5.99e-15 | 10 |
neuron associated cell (sensu Vertebrata) | 5.99e-15 | 10 |
glial cell | 5.99e-15 | 10 |
glioblast | 5.99e-15 | 10 |
glioblast (sensu Vertebrata) | 5.99e-15 | 10 |
muscle precursor cell | 7.07e-15 | 6 |
muscle cell | 7.07e-15 | 6 |
myoblast | 7.07e-15 | 6 |
multi-potent skeletal muscle stem cell | 1.21e-09 | 9 |
embryonic cell | 3.10e-09 | 70 |
smooth muscle cell | 2.78e-08 | 3 |
vascular associated smooth muscle cell | 2.78e-08 | 3 |
aortic smooth muscle cell | 2.78e-08 | 3 |
smooth muscle myoblast | 2.78e-08 | 3 |
cardiocyte | 3.28e-08 | 3 |
striated muscle cell | 3.28e-08 | 3 |
cardiac muscle cell | 3.28e-08 | 3 |
cardiac muscle myoblast | 3.28e-08 | 3 |
bone marrow cell | 4.04e-07 | 3 |
mesenchymal stem cell of the bone marrow | 4.04e-07 | 3 |