FFCP PHASE1:Mm9::chr2:25947481..25947508,-: Difference between revisions
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{{FFCP|EntrezGene=67991|HGNC=|MCL_coexpression_id=283|UniProt=|association_with_transcript=-142bp_to_ENSMUST00000152133_5end|description=CAGE_peak_2_at_Nacc2_5end|id=chr2:25947481..25947508,-|ontology_enrichment_celltype=CL:0000221!1.15e-21!44;CL:0000133!1.15e-21!44;CL:0000055!1.19e-21!50;CL:0002319!4.41e-21!43;CL:0000393!1.73e-16!39;CL:0000211!1.73e-16!39;CL:0000540!6.62e-15!33;CL:0000047!6.62e-15!33;CL:0000031!6.62e-15!33;CL:0000404!6.62e-15!33;CL:0002321!2.40e-13!70;CL:0000220!2.40e-13!70;CL:0000117!3.07e-12!23;CL:0000337!3.07e-12!23;CL:0000333!3.54e-07!10;CL:0000095!3.54e-07!10;CL:0000243!3.54e-07!10;CL:0000123!3.54e-07!10;CL:0000125!3.54e-07!10;CL:0000030!3.54e-07!10;CL:0000339!3.54e-07!10|ontology_enrichment_celltype_v019_2=CL:0000221,2.22e-28,44;CL:0000133,2.22e-28,44;CL:0002319,1.43e-27,43;CL:0002321,2.95e-21,70;CL:0000393,1.35e-20,39;CL:0000211,1.35e-20,39;CL:0000540,4.54e-19,33;CL:0000047,4.54e-19,33;CL:0000031,4.54e-19,33;CL:0000404,4.54e-19,33;CL:0000117,2.33e-16,23;CL:0000337,2.33e-16,23;CL:0000333,2.37e-09,10;CL:0000095,2.37e-09,10;CL:0000243,2.37e-09,10;CL:0000123,2.37e-09,10;CL:0000125,2.37e-09,10;CL:0000030,2.37e-09,10;CL:0000339,2.37e-09,10;CL:0002453,2.95e-08,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.96e-34!75;UBERON:0001016!1.96e-34!75;UBERON:0001017!2.67e-33!73;UBERON:0005743!2.67e-33!73;UBERON:0004121!5.34e-30!102;UBERON:0000924!5.34e-30!102;UBERON:0006601!5.34e-30!102;UBERON:0000033!2.00e-23!63;UBERON:0001049!2.88e-22!52;UBERON:0005068!2.88e-22!52;UBERON:0006241!2.88e-22!52;UBERON:0007135!2.88e-22!52;UBERON:0000955!1.57e-21!50;UBERON:0006238!1.57e-21!50;UBERON:0002616!7.57e-21!49;UBERON:0002346!4.82e-19!71;UBERON:0003075!4.82e-19!71;UBERON:0007284!4.82e-19!71;UBERON:0002020!5.50e-18!34;UBERON:0002791!3.03e-15!29;UBERON:0003528!3.03e-15!29;UBERON:0001893!3.03e-15!29;UBERON:0003056!3.54e-15!49;UBERON:0003080!6.23e-15!40;UBERON:0002780!2.68e-14!39;UBERON:0001890!2.68e-14!39;UBERON:0006240!2.68e-14!39;UBERON:0000153!6.89e-12!94;UBERON:0007811!7.68e-12!86;UBERON:0000956!2.64e-11!21;UBERON:0001869!2.64e-11!21;UBERON:0000203!2.64e-11!21;UBERON:0002619!1.11e-09!17;UBERON:0003076!3.09e-08!12;UBERON:0003057!3.09e-08!12;UBERON:0004111!3.41e-08!122;UBERON:0000025!2.46e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0001016,9.91e-43,75;UBERON:0001017,3.44e-41,73;UBERON:0004121,3.60e-38,95;UBERON:0000924,3.60e-38,95;UBERON:0006601,3.60e-38,95;UBERON:0000073,3.34e-29,54;UBERON:0001049,3.59e-27,52;UBERON:0005068,3.59e-27,52;UBERON:0006241,3.59e-27,52;UBERON:0007135,3.59e-27,52;UBERON:0002346,5.11e-27,64;UBERON:0003075,5.11e-27,64;UBERON:0007284,5.11e-27,64;UBERON:0010371,1.21e-24,73;UBERON:0002020,2.44e-24,34;UBERON:0000955,3.51e-23,47;UBERON:0006238,3.51e-23,47;UBERON:0002616,2.74e-22,46;UBERON:0003528,1.57e-20,29;UBERON:0002791,1.57e-20,29;UBERON:0001893,1.57e-20,29;UBERON:0003080,2.55e-17,40;UBERON:0010314,3.28e-17,92;UBERON:0002780,1.76e-16,39;UBERON:0001890,1.76e-16,39;UBERON:0006240,1.76e-16,39;UBERON:0003056,3.64e-16,49;UBERON:0000956,4.60e-15,21;UBERON:0001869,4.60e-15,21;UBERON:0000203,4.60e-15,21;UBERON:0002619,8.17e-13,17;UBERON:0003076,8.16e-11,12;UBERON:0003057,8.16e-11,12;UBERON:0011216,1.34e-08,194;UBERON:0002021,2.09e-08,10;UBERON:0000411,2.09e-08,10;UBERON:0001950,2.09e-08,10;UBERON:0004111,6.23e-08,122;UBERON:0000025,5.47e-07,114|phase1_expression=4.96461426024861,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,0,0,0,0,0,4.5072943780067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01434908760924,2.53442328048786,1.65192076945513,3.12956537739216,42.0788551814262,23.9457939180574,32.0809333472568,19.8780718708015,40.250718022192,0,0,0,6.94600477297057,0.573066879877513,3.09403255366465,3.23706337375356,2.64495489636016,3.1691570175309,2.03306719241479,1.77858959222228,0.449949858640699,0.988866362566974,0,42.5432156936135,69.5435132632014,3.52544681848824,3.24014251996058,2.3135745748652,23.1377297367081,19.436431603742,2.69479758272899,2.49198224647415,3.67687514644008,75.9799578895782,43.1583202727934,42.241796645467,3.16527090552465,2.47016637726506,3.64639359389732,43.5525478442154,23.6360296213306,28.8788688298171,13.5529149317887,10.6778760599327,2.60959224155421,4.01348824665875,3.6274348851257,0,0,0,0,0,0,0.842666520790511,1.02258193546835,0.259786004602869,0,12.3942209403479,6.41632387071589,2.54805239706646,7.11066703153331,1.94841936910093,0.760079596425296,1.01104889002957,0.45673551887624,0,0,0.346970653532272,0,0.230615497256059,0,0.352766121407114,0,0,0.433798070759735,0,0.808834249737046,1.76673214768315,0.484875253135222,0,23.1296829639122,19.8974371472782,0.255457055208591,0,0,0,26.213361895844,22.8750301409313,1.88481528169297,14.0797699355744,8.43861009190091,36.5706958424826,19.1444690419954,0.407357455401265,0.622034853050465,0.505445516867349,3.57751155007006,0.260240885925407,0.229902104433473,1.0803727788321,0.60281927134286,1.36072998302656,0.896796041993948,1.03071897015702,1.55222022443409,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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:67991 | |||
|HGNC= | |||
|MCL_coexpression_id=283 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-142bp_to_ENSMUST00000152133_5end | |||
|cluster_id=chr2:25947481..25947508,- | |||
|description=CAGE_peak_2_at_Nacc2_5end | |||
|id=chr2:25947481..25947508,- | |||
|ontology_enrichment_celltype=CL:0000221!1.15e-21!44;CL:0000133!1.15e-21!44;CL:0000055!1.19e-21!50;CL:0002319!4.41e-21!43;CL:0000393!1.73e-16!39;CL:0000211!1.73e-16!39;CL:0000540!6.62e-15!33;CL:0000047!6.62e-15!33;CL:0000031!6.62e-15!33;CL:0000404!6.62e-15!33;CL:0002321!2.40e-13!70;CL:0000220!2.40e-13!70;CL:0000117!3.07e-12!23;CL:0000337!3.07e-12!23;CL:0000333!3.54e-07!10;CL:0000095!3.54e-07!10;CL:0000243!3.54e-07!10;CL:0000123!3.54e-07!10;CL:0000125!3.54e-07!10;CL:0000030!3.54e-07!10;CL:0000339!3.54e-07!10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,2.22e-28,44;CL:0000133,2.22e-28,44;CL:0002319,1.43e-27,43;CL:0002321,2.95e-21,70;CL:0000393,1.35e-20,39;CL:0000211,1.35e-20,39;CL:0000540,4.54e-19,33;CL:0000047,4.54e-19,33;CL:0000031,4.54e-19,33;CL:0000404,4.54e-19,33;CL:0000117,2.33e-16,23;CL:0000337,2.33e-16,23;CL:0000333,2.37e-09,10;CL:0000095,2.37e-09,10;CL:0000243,2.37e-09,10;CL:0000123,2.37e-09,10;CL:0000125,2.37e-09,10;CL:0000030,2.37e-09,10;CL:0000339,2.37e-09,10;CL:0002453,2.95e-08,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.96e-34!75;UBERON:0001016!1.96e-34!75;UBERON:0001017!2.67e-33!73;UBERON:0005743!2.67e-33!73;UBERON:0004121!5.34e-30!102;UBERON:0000924!5.34e-30!102;UBERON:0006601!5.34e-30!102;UBERON:0000033!2.00e-23!63;UBERON:0001049!2.88e-22!52;UBERON:0005068!2.88e-22!52;UBERON:0006241!2.88e-22!52;UBERON:0007135!2.88e-22!52;UBERON:0000955!1.57e-21!50;UBERON:0006238!1.57e-21!50;UBERON:0002616!7.57e-21!49;UBERON:0002346!4.82e-19!71;UBERON:0003075!4.82e-19!71;UBERON:0007284!4.82e-19!71;UBERON:0002020!5.50e-18!34;UBERON:0002791!3.03e-15!29;UBERON:0003528!3.03e-15!29;UBERON:0001893!3.03e-15!29;UBERON:0003056!3.54e-15!49;UBERON:0003080!6.23e-15!40;UBERON:0002780!2.68e-14!39;UBERON:0001890!2.68e-14!39;UBERON:0006240!2.68e-14!39;UBERON:0000153!6.89e-12!94;UBERON:0007811!7.68e-12!86;UBERON:0000956!2.64e-11!21;UBERON:0001869!2.64e-11!21;UBERON:0000203!2.64e-11!21;UBERON:0002619!1.11e-09!17;UBERON:0003076!3.09e-08!12;UBERON:0003057!3.09e-08!12;UBERON:0004111!3.41e-08!122;UBERON:0000025!2.46e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,9.91e-43,75;UBERON:0001017,3.44e-41,73;UBERON:0004121,3.60e-38,95;UBERON:0000924,3.60e-38,95;UBERON:0006601,3.60e-38,95;UBERON:0000073,3.34e-29,54;UBERON:0001049,3.59e-27,52;UBERON:0005068,3.59e-27,52;UBERON:0006241,3.59e-27,52;UBERON:0007135,3.59e-27,52;UBERON:0002346,5.11e-27,64;UBERON:0003075,5.11e-27,64;UBERON:0007284,5.11e-27,64;UBERON:0010371,1.21e-24,73;UBERON:0002020,2.44e-24,34;UBERON:0000955,3.51e-23,47;UBERON:0006238,3.51e-23,47;UBERON:0002616,2.74e-22,46;UBERON:0003528,1.57e-20,29;UBERON:0002791,1.57e-20,29;UBERON:0001893,1.57e-20,29;UBERON:0003080,2.55e-17,40;UBERON:0010314,3.28e-17,92;UBERON:0002780,1.76e-16,39;UBERON:0001890,1.76e-16,39;UBERON:0006240,1.76e-16,39;UBERON:0003056,3.64e-16,49;UBERON:0000956,4.60e-15,21;UBERON:0001869,4.60e-15,21;UBERON:0000203,4.60e-15,21;UBERON:0002619,8.17e-13,17;UBERON:0003076,8.16e-11,12;UBERON:0003057,8.16e-11,12;UBERON:0011216,1.34e-08,194;UBERON:0002021,2.09e-08,10;UBERON:0000411,2.09e-08,10;UBERON:0001950,2.09e-08,10;UBERON:0004111,6.23e-08,122;UBERON:0000025,5.47e-07,114 | |||
|phase1_expression=4.96461426024861,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,0,0,0,0,0,4.5072943780067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01434908760924,2.53442328048786,1.65192076945513,3.12956537739216,42.0788551814262,23.9457939180574,32.0809333472568,19.8780718708015,40.250718022192,0,0,0,6.94600477297057,0.573066879877513,3.09403255366465,3.23706337375356,2.64495489636016,3.1691570175309,2.03306719241479,1.77858959222228,0.449949858640699,0.988866362566974,0,42.5432156936135,69.5435132632014,3.52544681848824,3.24014251996058,2.3135745748652,23.1377297367081,19.436431603742,2.69479758272899,2.49198224647415,3.67687514644008,75.9799578895782,43.1583202727934,42.241796645467,3.16527090552465,2.47016637726506,3.64639359389732,43.5525478442154,23.6360296213306,28.8788688298171,13.5529149317887,10.6778760599327,2.60959224155421,4.01348824665875,3.6274348851257,0,0,0,0,0,0,0.842666520790511,1.02258193546835,0.259786004602869,0,12.3942209403479,6.41632387071589,2.54805239706646,7.11066703153331,1.94841936910093,0.760079596425296,1.01104889002957,0.45673551887624,0,0,0.346970653532272,0,0.230615497256059,0,0.352766121407114,0,0,0.433798070759735,0,0.808834249737046,1.76673214768315,0.484875253135222,0,23.1296829639122,19.8974371472782,0.255457055208591,0,0,0,26.213361895844,22.8750301409313,1.88481528169297,14.0797699355744,8.43861009190091,36.5706958424826,19.1444690419954,0.407357455401265,0.622034853050465,0.505445516867349,3.57751155007006,0.260240885925407,0.229902104433473,1.0803727788321,0.60281927134286,1.36072998302656,0.896796041993948,1.03071897015702,1.55222022443409,1.07783996466421,0.567318240503458,1.58356011747554,1.53437012699302,0.278047249225598,0.696504333044333,0.411564272815887,0,0,0,0,0.621377317606506,0.234526059981096,0.36012412292203,0.946978942340841,0.393528463494808,0,0.232533944750408,0.268273401399619,0.233530684734339,0.329119699826961,0.164167464079095,0.0810688095458557,0.146199987425332,0,0.268412837520744,16.8231958851302,2.6755199218614,0,0,1.06644125267617,0.232236671860439,0.257734922644187,1.00841762311671,0.889512175379481,0,0,0.164698954724011,0,0.397912944082302,0,0,0.216138049874694,0,0.758671603812327,0.114248512609729,0,0.203651327845314,0.193952487167626,0.561086559122548,0,0.442830443938806,0.627994911365499,0,0,0.333690211432188,0,0.224862112384854,0.202860121388503,0,0.25462585178142,0,0.324270453550071,0,1.43768206527355,0,0.624075346229121,0,0,0,0,0.568474235311454,1.46668478797823,0.339490171550376,0.938760993154008,0.335012514883631,0,0.195133647857799,0,0.44292937929755,0.797273843287435,0.327726629431476,0.172684981865896,0,0,0,0.491764273019036,1.10374698521893,44.793614606594,35.0462942910687,2.29508923527346,1.00988370881749,1.89304931649754,1.17131623288992,3.87762115919038,0.955875191810208,2.00518806674155,5.37845408498782,1.21443210502468,2.04579100537918,2.37172666767914,24.4204200480573,0,0.178065603667255,0.162886959353576,0.329940245945071,0,0.971122544619926,0.604647113929502,0.188605079755898,0.295301892880773,0.307435147943927,0.258428293168221,1.45413491791002,1.06949213515416,1.26414703174326,0,0,3.40439605753788,0.720244376125241,0.776152102696527,0.428674070063185,0,0.535106452806212,0.329098041204242,0.304464949114599,0,0,0,0.65954501176592,0.484393280087717,0.904693873922338,0.238744688006273,0.328281799490123,0,68.4219364418781,0.512612642393558,0,0,0.376736914009382,0.136694227721025,0,0.169978429993855,0,0,0,1.10717597753397,0.813277868507395,0.216010681643603,0.209088296014469,0.436725127492355,0.539457385539283,0.495920734352016,1.04702376793612,0,3.10669656543463,0,0,0,0.194451188344048,0.258319646955462,0.168956125490778,0,0.5208175393758,0.629156066554265,0,0,0,0.202725215290164,0.205421914329655,0,0,0.198681354781265,0,0.147689527174577,0,0,0,0,0,0,1.13365191807606,0.221985953374065,0,0,1.35232715822533,0,0.73260649706906,0.214368379079066,0.501572104035363,7.34177395402186,9.66682996665071,7.44764167471216,6.70227411140382,15.7568979547248,12.8416962556249,12.8254275044043,10.3573876741571,13.1411298605419,10.3552062350364,2.28332164685189,1.59609949360412,1.70733605754134,1.45864030240976,2.09613162627982,1.47074806760011,1.33348036680969,1.44224540067226,0.320919209591815,1.26348605881899,1.2673964994512,0.565879024158229,0.749132059759059,0.640251524048693,0.804096565378586,0.476293691283074,0.695305955669133,0.38581844092741,0.412085900803307,0.883193520806384,0.685738504770831,0.354951612318675,0.238436189947321,1.0174249164263,0.564656282491984,0.761531471025089,0.365855945745545,0.789209134313529,0.543216455383447,2.24456908663095,1.06771516311757,0.886540341380071,0.818462086339379,0.309873682371932,0.578719832943424,2.49810577937946,1.16965804222704,1.07435527024149,2.48674831689496,1.98532277207564,2.31867835620421 | |||
|short_description=p2@Nacc2 | |||
}} |
Revision as of 21:21, 4 August 2015
Short description: | p2@Nacc2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Nacc2_5end |
Coexpression cluster: | MCL_coexpression_mm9:283 |
Association with transcript: | -142bp_to_ENSMUST00000152133_5end |
EntrezGene: | 67991 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 2.22e-28 | 44 |
neurectodermal cell | 2.22e-28 | 44 |
neural cell | 1.43e-27 | 43 |
embryonic cell | 2.95e-21 | 70 |
electrically responsive cell | 1.35e-20 | 39 |
electrically active cell | 1.35e-20 | 39 |
neuron | 4.54e-19 | 33 |
neuronal stem cell | 4.54e-19 | 33 |
neuroblast | 4.54e-19 | 33 |
electrically signaling cell | 4.54e-19 | 33 |
CNS neuron (sensu Vertebrata) | 2.33e-16 | 23 |
neuroblast (sensu Vertebrata) | 2.33e-16 | 23 |
migratory neural crest cell | 2.37e-09 | 10 |
neuron associated cell | 2.37e-09 | 10 |
glial cell (sensu Vertebrata) | 2.37e-09 | 10 |
neuron associated cell (sensu Vertebrata) | 2.37e-09 | 10 |
glial cell | 2.37e-09 | 10 |
glioblast | 2.37e-09 | 10 |
glioblast (sensu Vertebrata) | 2.37e-09 | 10 |
oligodendrocyte precursor cell | 2.95e-08 | 8 |