FFCP PHASE1:Mm9::chr1:138177160..138177178,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr1:138177160..138177178,- to FFCP PHASE1:Mm9::chr1:138177160..138177178,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=186 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:138177160..138177178,- | |||
|description=CAGE_peak_at_chr1:138177160..138177178,- | |||
|id=chr1:138177160..138177178,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,2.32e-09,3;CL:0000117,5.57e-08,23;CL:0000337,5.57e-08,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!5.61e-08!71;UBERON:0003075!5.61e-08!71;UBERON:0007284!5.61e-08!71;UBERON:0003056!7.09e-08!49;UBERON:0001017!5.09e-07!73;UBERON:0005743!5.09e-07!73;UBERON:0000955!6.16e-07!50;UBERON:0006238!6.16e-07!50;UBERON:0002780!6.34e-07!39;UBERON:0001890!6.34e-07!39;UBERON:0006240!6.34e-07!39;UBERON:0002616!7.52e-07!49;UBERON:0000033!9.63e-07!63 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.19e-16,54;UBERON:0002020,3.78e-14,34;UBERON:0002780,4.30e-13,39;UBERON:0001890,4.30e-13,39;UBERON:0006240,4.30e-13,39;UBERON:0003056,1.03e-12,49;UBERON:0003080,1.12e-12,40;UBERON:0003528,1.90e-12,29;UBERON:0002791,1.90e-12,29;UBERON:0001893,1.90e-12,29;UBERON:0001017,2.11e-12,73;UBERON:0002021,2.21e-12,10;UBERON:0000411,2.21e-12,10;UBERON:0001950,2.21e-12,10;UBERON:0001049,6.10e-12,52;UBERON:0005068,6.10e-12,52;UBERON:0006241,6.10e-12,52;UBERON:0007135,6.10e-12,52;UBERON:0001016,6.15e-12,75;UBERON:0002346,1.65e-11,64;UBERON:0003075,1.65e-11,64;UBERON:0007284,1.65e-11,64;UBERON:0002616,1.47e-10,46;UBERON:0004121,1.73e-10,95;UBERON:0000924,1.73e-10,95;UBERON:0006601,1.73e-10,95;UBERON:0000955,2.94e-10,47;UBERON:0006238,2.94e-10,47;UBERON:0010371,1.55e-09,73;UBERON:0004684,2.32e-09,3;UBERON:0002275,2.32e-09,3;UBERON:0002619,8.27e-09,17;UBERON:0000956,1.42e-08,21;UBERON:0001869,1.42e-08,21;UBERON:0000203,1.42e-08,21 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.84473233291,0,0,0.398860794976682,0,0.0874204024189974,0,0,2.09868563438444,0,0,0.84877930359606,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0.734187008646726,0,0,0,0,0,0,0.335565212115473,0.725362142011344,0.336093799142464,0.514518872071894,0,0.515672092277442,0.606949382578793,0,0.633831403506179,0,0,0,0,0,0,0.384218305321555,1.14058573539325,0.810035629990144,0.420649922702764,0.285650984403804,0,0.734944795289724,0.0958454710182364,0,3.30347642998166,2.29837208553338,3.07213066512487,0.527545150920775,1.18933936683133,0,0,1.68828783009504,2.75036845998258,2.94628585473668,2.13557521198654,0.745597783301202,0.227178579999552,0,0,0,0,0.539703191637817,0.649776417447669,0.448026887097336,0.140444420131752,0.340860645156116,0.259786004602869,0.35333957451034,0,0,0,0,1.5154372870785,0.253359865475099,0,0,0,0.29688427812965,0.346970653532272,0.304465478312141,0.230615497256059,0.150722640552623,0.117588707135705,0.251333182659351,0,0.144599356919912,0,0.161766849947409,0.883366073841574,1.45462575940567,0,0,0.209446706813455,0,0.11981512450592,0,0,0,0.457500602818626,1.38219787324151,0.347648640384553,0.255715457330331,1.0389402227978,1.1356888414743,0.305518091550949,0,0,0.420883711772948,0.780722657776222,0,0.180062129805349,1.80845781402858,0.340182495756639,0.896796041993948,0.281105173679186,1.29351685369508,0,0.189106080167819,0,0.219195732427575,0.556094498451196,0.348252166522167,0,0.199034266818493,0,0,0,0,0.469052119962192,0,0,0.393528463494808,0.154267112887378,0.697601834251224,0.268273401399619,0.583826711835847,0.329119699826961,0.32833492815819,0.0810688095458557,0.292399974850665,0.439100230582101,0.134206418760372,0.630869845692382,1.44066457330998,0,0,0.639864751605702,0,0,0.201683524623343,0,0,0,0.329397909448022,0.251335208800269,0,0,0,0.432276099749388,0,0,0.685491075658373,0,0.203651327845314,0.193952487167626,0.771494018793504,0.189709611372772,0.590440591918409,0.31399745568275,0.246794327843601,0,0,0.393117990226406,0,0,0,0,0,0.648540907100142,0.274561413188081,11.5014565221884,0,0.312037673114561,0,0.179397413521912,0.482443521363367,0.739012760666419,0,0.162964976442026,1.18821560042632,0,0.167506257441816,0,0.390267295715598,0.472905432318573,1.55025282754142,0.637819074629948,0.983179888294428,0.690739927463582,0.433947175744535,0,0.54390568381871,0,0,0.481651769963376,0.35163505977661,0.327869890753351,0,0.631016438832513,0,0.861693590931196,0.238968797952552,0.222798674082394,0.283076530788832,0,1.75353514746787,0.395287777946524,0.321321316421807,0,0,0.651547837414304,0,0,0.242780636154981,0.604647113929502,0.754420319023592,0.295301892880773,0,0.516856586336442,0,0,0.316036757935816,0,1.03135543248187,0.340439605753788,0.540183282093931,0.129358683782755,0.214337035031592,0,1.07021290561242,0.493647061806363,0.304464949114599,0,0,0.220528398054962,0.16488625294148,0.161464426695906,0.0603129249281559,0.238744688006273,0.164140899745061,0,0.18542530201051,0,0,0.370389054739423,0.753473828018764,0.820165366326151,1.37266903923914,0,0,0,0,0.158167996790568,0,0.648032044930808,1.04544148007234,0.436725127492355,1.07891477107857,0.41326727862668,0.523511883968059,0.129614973291793,0,0.56369293868419,0.149516546043979,0,0,0.129159823477731,1.520605129417,0.58678619322877,0.5208175393758,0.629156066554265,0.724752362478018,0.576060012515731,0,0,0.205421914329655,0.25984164595559,0,0.39736270956253,0.240390899039938,0,0.100966449948148,0.15241361331,0.100826185136841,0.292373642219257,0.0962118416403295,0.116876902181569,0,0,0.358855426437903,0.839423081820392,0.19318959403219,0,0,0.428736758158132,0,1.12950368523413,2.76195141904306,2.29158205375759,0.68741272937475,0,0,2.70009000092722,2.2516060161211,1.81256963593682,2.07104124700728,0.415149390336707,0.399024873401031,0,0,0.209613162627982,0.183843508450014,0.222246727801615,0.206035057238894,0,0.505394423527595,0.25347929989024,0.188626341386076,0.37456602987953,0.256100609619477,0.17230640686684,0,0,0.192909220463705,0.412085900803307,0.294397840268795,0.342869252385415,1.24233064311536,0.476872379894642,0.290692833264657,0.188218760830661,0.423073039458382,0.548783918618318,0.263069711437843,0.679020569229309,0,0,0.689531376628944,0.409231043169689,0.154936841185966,0.192906610981141,0,0.233931608445408,0.214871054048298,0,0.220591419119515,0 | |phase1_expression=0,0,0,0,0,0,0,0,0.84473233291,0,0,0.398860794976682,0,0.0874204024189974,0,0,2.09868563438444,0,0,0.84877930359606,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0.734187008646726,0,0,0,0,0,0,0.335565212115473,0.725362142011344,0.336093799142464,0.514518872071894,0,0.515672092277442,0.606949382578793,0,0.633831403506179,0,0,0,0,0,0,0.384218305321555,1.14058573539325,0.810035629990144,0.420649922702764,0.285650984403804,0,0.734944795289724,0.0958454710182364,0,3.30347642998166,2.29837208553338,3.07213066512487,0.527545150920775,1.18933936683133,0,0,1.68828783009504,2.75036845998258,2.94628585473668,2.13557521198654,0.745597783301202,0.227178579999552,0,0,0,0,0.539703191637817,0.649776417447669,0.448026887097336,0.140444420131752,0.340860645156116,0.259786004602869,0.35333957451034,0,0,0,0,1.5154372870785,0.253359865475099,0,0,0,0.29688427812965,0.346970653532272,0.304465478312141,0.230615497256059,0.150722640552623,0.117588707135705,0.251333182659351,0,0.144599356919912,0,0.161766849947409,0.883366073841574,1.45462575940567,0,0,0.209446706813455,0,0.11981512450592,0,0,0,0.457500602818626,1.38219787324151,0.347648640384553,0.255715457330331,1.0389402227978,1.1356888414743,0.305518091550949,0,0,0.420883711772948,0.780722657776222,0,0.180062129805349,1.80845781402858,0.340182495756639,0.896796041993948,0.281105173679186,1.29351685369508,0,0.189106080167819,0,0.219195732427575,0.556094498451196,0.348252166522167,0,0.199034266818493,0,0,0,0,0.469052119962192,0,0,0.393528463494808,0.154267112887378,0.697601834251224,0.268273401399619,0.583826711835847,0.329119699826961,0.32833492815819,0.0810688095458557,0.292399974850665,0.439100230582101,0.134206418760372,0.630869845692382,1.44066457330998,0,0,0.639864751605702,0,0,0.201683524623343,0,0,0,0.329397909448022,0.251335208800269,0,0,0,0.432276099749388,0,0,0.685491075658373,0,0.203651327845314,0.193952487167626,0.771494018793504,0.189709611372772,0.590440591918409,0.31399745568275,0.246794327843601,0,0,0.393117990226406,0,0,0,0,0,0.648540907100142,0.274561413188081,11.5014565221884,0,0.312037673114561,0,0.179397413521912,0.482443521363367,0.739012760666419,0,0.162964976442026,1.18821560042632,0,0.167506257441816,0,0.390267295715598,0.472905432318573,1.55025282754142,0.637819074629948,0.983179888294428,0.690739927463582,0.433947175744535,0,0.54390568381871,0,0,0.481651769963376,0.35163505977661,0.327869890753351,0,0.631016438832513,0,0.861693590931196,0.238968797952552,0.222798674082394,0.283076530788832,0,1.75353514746787,0.395287777946524,0.321321316421807,0,0,0.651547837414304,0,0,0.242780636154981,0.604647113929502,0.754420319023592,0.295301892880773,0,0.516856586336442,0,0,0.316036757935816,0,1.03135543248187,0.340439605753788,0.540183282093931,0.129358683782755,0.214337035031592,0,1.07021290561242,0.493647061806363,0.304464949114599,0,0,0.220528398054962,0.16488625294148,0.161464426695906,0.0603129249281559,0.238744688006273,0.164140899745061,0,0.18542530201051,0,0,0.370389054739423,0.753473828018764,0.820165366326151,1.37266903923914,0,0,0,0,0.158167996790568,0,0.648032044930808,1.04544148007234,0.436725127492355,1.07891477107857,0.41326727862668,0.523511883968059,0.129614973291793,0,0.56369293868419,0.149516546043979,0,0,0.129159823477731,1.520605129417,0.58678619322877,0.5208175393758,0.629156066554265,0.724752362478018,0.576060012515731,0,0,0.205421914329655,0.25984164595559,0,0.39736270956253,0.240390899039938,0,0.100966449948148,0.15241361331,0.100826185136841,0.292373642219257,0.0962118416403295,0.116876902181569,0,0,0.358855426437903,0.839423081820392,0.19318959403219,0,0,0.428736758158132,0,1.12950368523413,2.76195141904306,2.29158205375759,0.68741272937475,0,0,2.70009000092722,2.2516060161211,1.81256963593682,2.07104124700728,0.415149390336707,0.399024873401031,0,0,0.209613162627982,0.183843508450014,0.222246727801615,0.206035057238894,0,0.505394423527595,0.25347929989024,0.188626341386076,0.37456602987953,0.256100609619477,0.17230640686684,0,0,0.192909220463705,0.412085900803307,0.294397840268795,0.342869252385415,1.24233064311536,0.476872379894642,0.290692833264657,0.188218760830661,0.423073039458382,0.548783918618318,0.263069711437843,0.679020569229309,0,0,0.689531376628944,0.409231043169689,0.154936841185966,0.192906610981141,0,0.233931608445408,0.214871054048298,0,0.220591419119515,0 | ||
|short_description=p@chr1:138177160..138177178,- | |||
}} | }} |
Latest revision as of 21:35, 4 August 2015
Short description: | p@chr1:138177160..138177178, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:138177160..138177178, - |
Coexpression cluster: | MCL_coexpression_mm9:186 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 2.32e-09 | 3 |
CNS neuron (sensu Vertebrata) | 5.57e-08 | 23 |
neuroblast (sensu Vertebrata) | 5.57e-08 | 23 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 1.19e-16 | 54 |
gray matter | 3.78e-14 | 34 |
regional part of forebrain | 4.30e-13 | 39 |
forebrain | 4.30e-13 | 39 |
future forebrain | 4.30e-13 | 39 |
pre-chordal neural plate | 1.03e-12 | 49 |
anterior neural tube | 1.12e-12 | 40 |
brain grey matter | 1.90e-12 | 29 |
regional part of telencephalon | 1.90e-12 | 29 |
telencephalon | 1.90e-12 | 29 |
central nervous system | 2.11e-12 | 73 |
occipital lobe | 2.21e-12 | 10 |
visual cortex | 2.21e-12 | 10 |
neocortex | 2.21e-12 | 10 |
neural tube | 6.10e-12 | 52 |
neural rod | 6.10e-12 | 52 |
future spinal cord | 6.10e-12 | 52 |
neural keel | 6.10e-12 | 52 |
nervous system | 6.15e-12 | 75 |
neurectoderm | 1.65e-11 | 64 |
neural plate | 1.65e-11 | 64 |
presumptive neural plate | 1.65e-11 | 64 |
regional part of brain | 1.47e-10 | 46 |
ectoderm-derived structure | 1.73e-10 | 95 |
ectoderm | 1.73e-10 | 95 |
presumptive ectoderm | 1.73e-10 | 95 |
brain | 2.94e-10 | 47 |
future brain | 2.94e-10 | 47 |
ecto-epithelium | 1.55e-09 | 73 |
raphe nuclei | 2.32e-09 | 3 |
reticular formation | 2.32e-09 | 3 |
regional part of cerebral cortex | 8.27e-09 | 17 |
cerebral cortex | 1.42e-08 | 21 |
cerebral hemisphere | 1.42e-08 | 21 |
pallium | 1.42e-08 | 21 |