FFCP PHASE1:Mm9::chr10:85061471..85061500,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=87|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:85061471..85061500,+|id=chr10:85061471..85061500,+|ontology_enrichment_celltype=CL:0000117!3.17e-16!23;CL:0000337!3.17e-16!23;CL:0000540!8.48e-13!33;CL:0000047!8.48e-13!33;CL:0000031!8.48e-13!33;CL:0000404!8.48e-13!33;CL:0000393!8.45e-10!39;CL:0000211!8.45e-10!39;CL:0000221!5.64e-09!44;CL:0000133!5.64e-09!44;CL:0002319!7.45e-09!43|ontology_enrichment_celltype_v019_2=CL:0000117,2.54e-38,23;CL:0000337,2.54e-38,23;CL:0000540,8.49e-26,33;CL:0000047,8.49e-26,33;CL:0000031,8.49e-26,33;CL:0000404,8.49e-26,33;CL:0000393,2.33e-21,39;CL:0000211,2.33e-21,39;CL:0002319,4.35e-19,43;CL:0000221,1.39e-18,44;CL:0000133,1.39e-18,44;CL:0000120,1.77e-12,3;CL:0002612,3.21e-12,3;CL:0002613,3.21e-12,3;CL:0002321,1.56e-10,70;CL:0000723,1.80e-08,91;CL:0000048,1.80e-08,91;CL:0002611,1.95e-08,2;CL:0000034,9.60e-08,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!3.70e-24!71;UBERON:0003075!3.70e-24!71;UBERON:0007284!3.70e-24!71;UBERON:0001017!1.44e-21!73;UBERON:0005743!1.44e-21!73;UBERON:0001049!6.56e-21!52;UBERON:0005068!6.56e-21!52;UBERON:0006241!6.56e-21!52;UBERON:0007135!6.56e-21!52;UBERON:0004121!9.70e-21!102;UBERON:0000924!9.70e-21!102;UBERON:0006601!9.70e-21!102;UBERON:0000073!2.12e-20!75;UBERON:0001016!2.12e-20!75;UBERON:0000033!1.53e-18!63;UBERON:0000955!2.69e-17!50;UBERON:0006238!2.69e-17!50;UBERON:0003056!9.12e-17!49;UBERON:0002616!1.04e-16!49;UBERON:0002020!3.06e-15!34;UBERON:0003080!6.62e-14!40;UBERON:0002780!3.60e-13!39;UBERON:0001890!3.60e-13!39;UBERON:0006240!3.60e-13!39;UBERON:0002791!3.49e-11!29;UBERON:0003528!3.49e-11!29;UBERON:0001893!3.49e-11!29;UBERON:0007811!2.73e-09!86;UBERON:0000153!3.46e-09!94;UBERON:0003076!5.46e-08!12;UBERON:0003057!5.46e-08!12;UBERON:0000956!5.69e-07!21;UBERON:0001869!5.69e-07!21;UBERON:0000203!5.69e-07!21;UBERON:0002240!1.00e-06!6;UBERON:0005174!1.00e-06!6;UBERON:0001137!1.00e-06!6|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.89e-25,73;UBERON:0002020,2.31e-24,34;UBERON:0001016,4.04e-24,75;UBERON:0000073,5.07e-23,54;UBERON:0002240,2.56e-22,6;UBERON:0005174,2.56e-22,6;UBERON:0001137,2.56e-22,6;UBERON:0001049,1.16e-21,52;UBERON:0005068,1.16e-21,52;UBERON:0006241,1.16e-21,52;UBERON:0007135,1.16e-21,52;UBERON:0001948,5.27e-19,5;UBERON:0002315,5.27e-19,5;UBERON:0004121,3.27e-18,95;UBERON:0000924,3.27e-18,95;UBERON:0006601,3.27e-18,95;UBERON:0002346,6.12e-17,64;UBERON:0003075,6.12e-17,64;UBERON:0007284,6.12e-17,64;UBERON:0002420,1.12e-15,8;UBERON:0007245,1.12e-15,8;UBERON:0010009,1.12e-15,8;UBERON:0010011,1.12e-15,8;UBERON:0000454,1.12e-15,8;UBERON:0003076,1.85e-14,12;UBERON:0003057,1.85e-14,12;UBERON:0010371,2.05e-14,73;UBERON:0003528,6.70e-13,29;UBERON:0002791,6.70e-13,29;UBERON:0001893,6.70e-13,29;UBERON:0002257,3.21e-12,3;UBERON:0000369,3.31e-12,5;UBERON:0002435,3.31e-12,5;UBERON:0000204,3.31e-12,5;UBERON:0010082,3.31e-12,5;UBERON:0010314,1.07e-10,92;UBERON:0003080,1.31e-10,40;UBERON:0002616,1.33e-10,46;UBERON:0000955,2.51e-10,47;UBERON:0006238,2.51e-10,47;UBERON:0002780,4.23e-09,39;UBERON:0001890,4.23e-09,39;UBERON:0006240,4.23e-09,39;UBERON:0002256,1.95e-08,2;UBERON:0003056,2.89e-08,49;UBERON:0002950,4.09e-08,4;UBERON:0001891,4.09e-08,4;UBERON:0009616,4.09e-08,4;UBERON:0010286,4.09e-08,4;UBERON:0000025,6.17e-08,114;UBERON:0011216,1.17e-07,194;UBERON:0004111,3.54e-07,122|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0.218025156380447,0,0,0.279972843250725,0,0,0,0,0,0,0,3.03474691289397,3.1739458756322,2.53532561402472,0,0,0,0,0,0,0,0.622137673850866,0.270011876663381,0.210324961351382,1.99955689082663,2.20868540951614,0.244981598429908,0.862609239164127,1.83843757322004,0,1.14918604276669,1.53606533256243,2.90149833006426,2.65314166446988,2.08365348222704,0.837548997004143,1.12552522006336,1.22238598221448,2.06240009831567,3.84403538157578,2.23679334990361,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.173485326766136,0,0.461230994512117,0.150722640552623,0.352766121407114,0.125666591329675,0,0,0,0,0,0,0,0.292780797011547,0.83778682725382,0,0.239630249011841,0,0.127070227073065,1.64769703345305,0,1.38219787324151,0.869121600961382,0.511430914660661,0.83115217823824,0.973447578406546,0.101839363850316,0,0,0,0.260240885925407,0.229902104433473,0.900310649026746,0.30140963567143,0.476255494059295,0.512454881139399,0.562210347358373,0.258703370739016,0.215567992932842,0.378212160335639,0.175951124163949,0,0.278047249225598,0,0,0,0,0,0,0.207125772535502,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,1.23485534855141,0,0,1.06644125267617,0,0.38660238396628,0,0,0,0,0,0.502670417600539,0,0,0,0,0,0,0.114248512609729,0,0.407302655690628,0,0.420814919341911,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0.169745085775188,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0.963303539926752,1.52375192569864,0,0,0,0.780877488593277,0,0.477937595905104,0,0,0.404810701674894,0,0.395287777946524,0.642642632843614,0,0,0.162886959353576,0.164970122972535,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0.340439605753788,0.36012218806262,0.388076051348264,0.214337035031592,0,0,0.164549020602121,0.608929898229199,0,0,0,0.16488625294148,0,0,0,0,0,1.8542530201051,0,0,0,0,0,0,0.509935289981566,0.419854356970974,0,0,0.158167996790568,0,0.108005340821801,0,0,0,0,0,0,0,0,0.149516546043979,0,0.777804753376191,0.387479470433193,0,0.234714477291508,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0.214368379079066,0.501572104035363,1.6942555278512,0.920650473014354,1.71868654031819,1.54667864109319,0.685082519770642,0.755393897389701,0,0.900642406448441,0,0,0.415149390336707,0,0.341467211508268,0.243106717068294,0.838452650511929,0.735374033800057,0.666740183404846,0.824140228955577,0,0,0.25347929989024,0.377252682772152,0.187283014939765,0.192075457214608,0.689225627467359,0.476293691283074,0.231768651889711,0.578727661391115,0,0.147198920134397,0,0,0.238436189947321,0.436039249896986,0.282328141245992,0.592302255241736,0,0.263069711437843,0.271608227691724,0.561142271657738,0.593175090620871,0.394017929502254,0,0.154936841185966,0.192906610981141,0.999242311751784,0.233931608445408,0.214871054048298,0.191288332068843,0,0.231867835620421|short_description=p@chr10:85061471..85061500,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=87 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:85061471..85061500,+ | |||
|description=CAGE_peak_at_chr10:85061471..85061500,+ | |||
|id=chr10:85061471..85061500,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.17e-16!23;CL:0000337!3.17e-16!23;CL:0000540!8.48e-13!33;CL:0000047!8.48e-13!33;CL:0000031!8.48e-13!33;CL:0000404!8.48e-13!33;CL:0000393!8.45e-10!39;CL:0000211!8.45e-10!39;CL:0000221!5.64e-09!44;CL:0000133!5.64e-09!44;CL:0002319!7.45e-09!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.54e-38,23;CL:0000337,2.54e-38,23;CL:0000540,8.49e-26,33;CL:0000047,8.49e-26,33;CL:0000031,8.49e-26,33;CL:0000404,8.49e-26,33;CL:0000393,2.33e-21,39;CL:0000211,2.33e-21,39;CL:0002319,4.35e-19,43;CL:0000221,1.39e-18,44;CL:0000133,1.39e-18,44;CL:0000120,1.77e-12,3;CL:0002612,3.21e-12,3;CL:0002613,3.21e-12,3;CL:0002321,1.56e-10,70;CL:0000723,1.80e-08,91;CL:0000048,1.80e-08,91;CL:0002611,1.95e-08,2;CL:0000034,9.60e-08,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!3.70e-24!71;UBERON:0003075!3.70e-24!71;UBERON:0007284!3.70e-24!71;UBERON:0001017!1.44e-21!73;UBERON:0005743!1.44e-21!73;UBERON:0001049!6.56e-21!52;UBERON:0005068!6.56e-21!52;UBERON:0006241!6.56e-21!52;UBERON:0007135!6.56e-21!52;UBERON:0004121!9.70e-21!102;UBERON:0000924!9.70e-21!102;UBERON:0006601!9.70e-21!102;UBERON:0000073!2.12e-20!75;UBERON:0001016!2.12e-20!75;UBERON:0000033!1.53e-18!63;UBERON:0000955!2.69e-17!50;UBERON:0006238!2.69e-17!50;UBERON:0003056!9.12e-17!49;UBERON:0002616!1.04e-16!49;UBERON:0002020!3.06e-15!34;UBERON:0003080!6.62e-14!40;UBERON:0002780!3.60e-13!39;UBERON:0001890!3.60e-13!39;UBERON:0006240!3.60e-13!39;UBERON:0002791!3.49e-11!29;UBERON:0003528!3.49e-11!29;UBERON:0001893!3.49e-11!29;UBERON:0007811!2.73e-09!86;UBERON:0000153!3.46e-09!94;UBERON:0003076!5.46e-08!12;UBERON:0003057!5.46e-08!12;UBERON:0000956!5.69e-07!21;UBERON:0001869!5.69e-07!21;UBERON:0000203!5.69e-07!21;UBERON:0002240!1.00e-06!6;UBERON:0005174!1.00e-06!6;UBERON:0001137!1.00e-06!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.89e-25,73;UBERON:0002020,2.31e-24,34;UBERON:0001016,4.04e-24,75;UBERON:0000073,5.07e-23,54;UBERON:0002240,2.56e-22,6;UBERON:0005174,2.56e-22,6;UBERON:0001137,2.56e-22,6;UBERON:0001049,1.16e-21,52;UBERON:0005068,1.16e-21,52;UBERON:0006241,1.16e-21,52;UBERON:0007135,1.16e-21,52;UBERON:0001948,5.27e-19,5;UBERON:0002315,5.27e-19,5;UBERON:0004121,3.27e-18,95;UBERON:0000924,3.27e-18,95;UBERON:0006601,3.27e-18,95;UBERON:0002346,6.12e-17,64;UBERON:0003075,6.12e-17,64;UBERON:0007284,6.12e-17,64;UBERON:0002420,1.12e-15,8;UBERON:0007245,1.12e-15,8;UBERON:0010009,1.12e-15,8;UBERON:0010011,1.12e-15,8;UBERON:0000454,1.12e-15,8;UBERON:0003076,1.85e-14,12;UBERON:0003057,1.85e-14,12;UBERON:0010371,2.05e-14,73;UBERON:0003528,6.70e-13,29;UBERON:0002791,6.70e-13,29;UBERON:0001893,6.70e-13,29;UBERON:0002257,3.21e-12,3;UBERON:0000369,3.31e-12,5;UBERON:0002435,3.31e-12,5;UBERON:0000204,3.31e-12,5;UBERON:0010082,3.31e-12,5;UBERON:0010314,1.07e-10,92;UBERON:0003080,1.31e-10,40;UBERON:0002616,1.33e-10,46;UBERON:0000955,2.51e-10,47;UBERON:0006238,2.51e-10,47;UBERON:0002780,4.23e-09,39;UBERON:0001890,4.23e-09,39;UBERON:0006240,4.23e-09,39;UBERON:0002256,1.95e-08,2;UBERON:0003056,2.89e-08,49;UBERON:0002950,4.09e-08,4;UBERON:0001891,4.09e-08,4;UBERON:0009616,4.09e-08,4;UBERON:0010286,4.09e-08,4;UBERON:0000025,6.17e-08,114;UBERON:0011216,1.17e-07,194;UBERON:0004111,3.54e-07,122 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0.218025156380447,0,0,0.279972843250725,0,0,0,0,0,0,0,3.03474691289397,3.1739458756322,2.53532561402472,0,0,0,0,0,0,0,0.622137673850866,0.270011876663381,0.210324961351382,1.99955689082663,2.20868540951614,0.244981598429908,0.862609239164127,1.83843757322004,0,1.14918604276669,1.53606533256243,2.90149833006426,2.65314166446988,2.08365348222704,0.837548997004143,1.12552522006336,1.22238598221448,2.06240009831567,3.84403538157578,2.23679334990361,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.173485326766136,0,0.461230994512117,0.150722640552623,0.352766121407114,0.125666591329675,0,0,0,0,0,0,0,0.292780797011547,0.83778682725382,0,0.239630249011841,0,0.127070227073065,1.64769703345305,0,1.38219787324151,0.869121600961382,0.511430914660661,0.83115217823824,0.973447578406546,0.101839363850316,0,0,0,0.260240885925407,0.229902104433473,0.900310649026746,0.30140963567143,0.476255494059295,0.512454881139399,0.562210347358373,0.258703370739016,0.215567992932842,0.378212160335639,0.175951124163949,0,0.278047249225598,0,0,0,0,0,0,0.207125772535502,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,1.23485534855141,0,0,1.06644125267617,0,0.38660238396628,0,0,0,0,0,0.502670417600539,0,0,0,0,0,0,0.114248512609729,0,0.407302655690628,0,0.420814919341911,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0.169745085775188,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0.963303539926752,1.52375192569864,0,0,0,0.780877488593277,0,0.477937595905104,0,0,0.404810701674894,0,0.395287777946524,0.642642632843614,0,0,0.162886959353576,0.164970122972535,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0.340439605753788,0.36012218806262,0.388076051348264,0.214337035031592,0,0,0.164549020602121,0.608929898229199,0,0,0,0.16488625294148,0,0,0,0,0,1.8542530201051,0,0,0,0,0,0,0.509935289981566,0.419854356970974,0,0,0.158167996790568,0,0.108005340821801,0,0,0,0,0,0,0,0,0.149516546043979,0,0.777804753376191,0.387479470433193,0,0.234714477291508,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0.214368379079066,0.501572104035363,1.6942555278512,0.920650473014354,1.71868654031819,1.54667864109319,0.685082519770642,0.755393897389701,0,0.900642406448441,0,0,0.415149390336707,0,0.341467211508268,0.243106717068294,0.838452650511929,0.735374033800057,0.666740183404846,0.824140228955577,0,0,0.25347929989024,0.377252682772152,0.187283014939765,0.192075457214608,0.689225627467359,0.476293691283074,0.231768651889711,0.578727661391115,0,0.147198920134397,0,0,0.238436189947321,0.436039249896986,0.282328141245992,0.592302255241736,0,0.263069711437843,0.271608227691724,0.561142271657738,0.593175090620871,0.394017929502254,0,0.154936841185966,0.192906610981141,0.999242311751784,0.233931608445408,0.214871054048298,0.191288332068843,0,0.231867835620421 | |||
|short_description=p@chr10:85061471..85061500,+ | |||
}} |
Latest revision as of 22:51, 4 August 2015
Short description: | p@chr10:85061471..85061500, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:85061471..85061500, + |
Coexpression cluster: | MCL_coexpression_mm9:87 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.54e-38 | 23 |
neuroblast (sensu Vertebrata) | 2.54e-38 | 23 |
neuron | 8.49e-26 | 33 |
neuronal stem cell | 8.49e-26 | 33 |
neuroblast | 8.49e-26 | 33 |
electrically signaling cell | 8.49e-26 | 33 |
electrically responsive cell | 2.33e-21 | 39 |
electrically active cell | 2.33e-21 | 39 |
neural cell | 4.35e-19 | 43 |
ectodermal cell | 1.39e-18 | 44 |
neurectodermal cell | 1.39e-18 | 44 |
granule cell | 1.77e-12 | 3 |
neuron of the ventral spinal cord | 3.21e-12 | 3 |
striatum neuron | 3.21e-12 | 3 |
embryonic cell | 1.56e-10 | 70 |
somatic stem cell | 1.80e-08 | 91 |
multi fate stem cell | 1.80e-08 | 91 |
neuron of the dorsal spinal cord | 1.95e-08 | 2 |
stem cell | 9.60e-08 | 97 |