FFCP PHASE1:Mm9::chr15:100563143..100563171,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=640 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc007xsd.1_5end | |association_with_transcript=0bp_to_uc007xsd.1_5end | ||
|cluster_id=chr15:100563143..100563171,- | |||
|description=CAGE_peak_1_at_uc007xsd.1_5end | |description=CAGE_peak_1_at_uc007xsd.1_5end | ||
|id=chr15:100563143..100563171,- | |id=chr15:100563143..100563171,- | ||
|ontology_enrichment_celltype=CL:0000988!1.86e-07!32;CL:0002032!1.86e-07!32;CL:0000037!1.86e-07!32;CL:0000566!1.86e-07!32;CL:0000837!1.86e-07!32;CL:0000791!5.32e-07!9;CL:0000789!5.32e-07!9;CL:0002420!5.32e-07!9;CL:0002419!5.32e-07!9;CL:0000790!5.32e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,6.21e-14,32;CL:0002032,6.21e-14,32;CL:0000037,6.21e-14,32;CL:0000837,6.21e-14,32;CL:0000791,4.28e-10,9;CL:0000789,4.28e-10,9;CL:0002420,4.28e-10,9;CL:0002419,4.28e-10,9;CL:0000790,4.28e-10,9;CL:0002031,2.02e-09,25;CL:0000624,4.08e-09,8;CL:0000838,1.19e-08,12;CL:0000542,9.77e-08,13;CL:0000051,9.77e-08,13;CL:0000084,9.85e-08,11;CL:0000827,9.85e-08,11;CL:0000107,1.23e-07,9;CL:0000049,1.62e-07,19;CL:0002320,2.72e-07,46;CL:0000134,2.72e-07,46;CL:0000034,5.08e-07,97;CL:0000893,5.27e-07,6;CL:0002489,5.27e-07,6;CL:0000898,5.27e-07,6;CL:0000809,5.27e-07,6;CL:0000810,5.27e-07,6;CL:0000895,5.27e-07,6;CL:0000808,5.27e-07,6;CL:0000894,5.27e-07,6;CL:0000806,5.27e-07,6;CL:0000807,5.27e-07,6;CL:0000805,5.27e-07,6;CL:0002425,5.27e-07,6;CL:0002436,5.27e-07,6;CL:0002427,5.27e-07,6;CL:0002428,5.27e-07,6;CL:0002429,5.27e-07,6;CL:0002433,5.27e-07,6;CL:0002431,5.27e-07,6;CL:0002432,5.27e-07,6;CL:0000553,9.30e-07,6;CL:0000556,9.30e-07,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.31e-13!48;UBERON:0002390!1.21e-11!45;UBERON:0003061!1.21e-11!45;UBERON:0004177!1.61e-10!29;UBERON:0002405!5.18e-10!70;UBERON:0003408!1.31e-08!24;UBERON:0002370!2.95e-08!23;UBERON:0000974!2.95e-08!23;UBERON:0004807!2.95e-08!23;UBERON:0005058!2.95e-08!23;UBERON:0003351!2.95e-08!23;UBERON:0009113!2.95e-08!23;UBERON:0003295!2.95e-08!23;UBERON:0009722!2.95e-08!23;UBERON:0005562!2.95e-08!23;UBERON:0007690!2.95e-08!23;UBERON:0006562!1.92e-07!24;UBERON:0001557!1.92e-07!24;UBERON:0001042!1.92e-07!24;UBERON:0008814!1.92e-07!24;UBERON:0009145!1.92e-07!24;UBERON:0005057!6.58e-07!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,8.70e-23,48;UBERON:0002405,8.70e-23,48;UBERON:0002390,3.23e-20,45;UBERON:0003061,3.23e-20,45;UBERON:0004177,1.59e-16,29;UBERON:0005057,1.59e-16,29;UBERON:0003408,2.72e-14,24;UBERON:0002370,9.78e-14,23;UBERON:0000974,9.78e-14,23;UBERON:0004807,9.78e-14,23;UBERON:0005058,9.78e-14,23;UBERON:0003351,9.78e-14,23;UBERON:0009113,9.78e-14,23;UBERON:0003295,9.78e-14,23;UBERON:0009722,9.78e-14,23;UBERON:0005562,9.78e-14,23;UBERON:0007690,9.78e-14,23;UBERON:0006562,7.08e-13,24;UBERON:0001557,7.08e-13,24;UBERON:0001042,7.08e-13,24;UBERON:0008814,7.08e-13,24;UBERON:0009145,7.08e-13,24;UBERON:0000077,3.24e-12,35;UBERON:0000072,1.06e-10,27;UBERON:0007811,1.80e-09,36;UBERON:0001004,2.76e-08,42;UBERON:0000153,3.98e-08,43;UBERON:0000065,7.78e-08,41;UBERON:0002410,1.23e-07,9;UBERON:0002384,2.72e-07,46;UBERON:0003081,4.47e-07,87 | |||
|phase1_expression=6.72625157840135,0.348975407639361,0.454999239389536,0,0.500895729946347,0.671517087647559,1.63528848416868,44.805793234227,16.7538579360483,17.0867104215055,5.82141091966717,5.18519033469687,30.1313284678922,23.6035086531293,3.66420737997229,6.88415909125408,2.09868563438444,29.6534435436743,27.834230021965,28.8584963222661,0.340173160604279,0.0992909512008853,0,4.95976510659561,2.52350209173887,0.57423196411502,0.430761996159075,1.50829862880122,1.14014051673824,1.76421090831952,1.33038306393183,0,0,0,0.288851619751275,0,0,0.418531630736908,0.7813353445238,2.09409497589519,0,0.683045484958446,0.971020706062307,0,0,0,0,0,0,0,0,0,17.4493910300046,20.3101399763176,19.1573465511204,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0.285650984403804,1.98781686856452,0,0,0,0,0.255374676170375,0,0,0,0.52091337055676,0,0,0,2.06240009831567,1.56608848879013,0.186399445825301,0.832988126665025,0.906858721281426,0,0.860423876981386,0,0,0,0,1.40444420131752,0,0,0,21.2673563862788,0,0,0,0,0,0,1.02765491747154,44.0194402200192,0.593768556259299,0.520455980298408,0.608930956624282,0.230615497256059,0.60289056221049,0.940709657085638,0,0,0.578397427679647,1.76922110389975,0.161766849947409,0.220841518460394,0.484875253135222,0,0,0,0.255457055208591,37.3823188458471,20.3966928537759,30.8780651787547,0.149790639404823,0,0,0,0,0,0.324482526135515,0.203678727700633,1.36847667671102,0,0.631325567659422,0.130120442962704,0.229902104433473,0.180062129805349,0.452114453507145,0.408218994907967,0.640568601424249,0.562210347358373,0,0,0,0.175951124163949,0.657587197282725,1.11218899690239,1.39300866608867,0.823128545631774,0.199034266818493,9.83098462238529,11.8380037272769,11.6507034752193,0,0.234526059981096,0,0.23674473558521,0,0.154267112887378,0.232533944750408,0,0,0.16455984991348,0.492502392237286,0.162137619091711,0.730999937126662,0.439100230582101,0.134206418760372,0,0,0.991256348951394,0,0.213288250535234,0,0.257734922644187,0.201683524623343,0.667134131534611,0,0,0,1.00534083520108,0.596869416123452,0.38992817423824,0,0.864552199498777,1.39398891278057,0,0,0,0,0.387904974335251,0.0701358198903186,0,0.295220295959204,0,0,0.592905254174298,0.166845105716094,0.393117990226406,0,0.405720242777006,0.964708639009667,1.2731292589071,2.01387296215567,1.13494658742525,1.37280706594041,0,1.86070473834252,3.12037673114561,0,0.358794827043824,0.482443521363367,2.21703828199926,0.189491411770485,0.162964976442026,0,0,0,0.238043640886014,0,0.472905432318573,1.10732344824387,0.478364305972461,0.983179888294428,1.89953480052485,2.02508682014116,1.50791283939272,0,1.47529281905711,0.827810238914197,0.321101179975584,0.35163505977661,0,0.252470927204373,2.2085575359138,3.12350995437311,4.09304455692318,8.36390792833932,9.80314165962534,5.37845408498782,2.02405350837447,2.04579100537918,1.58115111178609,0,0.283880170416537,0.178065603667255,0.488660878060728,0.329940245945071,0,0,0,0,0,0.307435147943927,0.516856586336442,0,0.356497378384721,1.26414703174326,0,0,0,0,0,0,0,0.178368817602071,0.987294123612726,0.913394847343798,0.23467170806371,0,0.661585194164886,1.31909002353184,0.807322133479528,0.844380948994182,0.477489376012546,1.31312719796049,1.1659233465194,0.556275906031529,6.4930934703184,0.619160603889667,1.66675074632741,3.20226376907975,6.83471138605126,6.63456702298916,48.6138309782426,43.2449987680103,39.1105925866519,0,0.316335993581135,0.406638934253697,0.108005340821801,0,0.218362563746178,0.404593039154462,0.661227645802687,0.785267825952089,0.648074866458964,1.86401793926078,0,0,0.165458490457098,0,0.129159823477731,0,0.234714477291508,0,0,0,0,18.0126338758062,1.21635129174099,2.36235201479103,1.03936658382236,1.9692936523423,2.18549490259391,8.05309511783791,5.02144392393563,7.06765149637033,5.25826965919499,4.33552596088414,8.77120926657772,9.62118416403295,12.3889516312463,0,0,0,0,0.19318959403219,0.187682475451182,0.915758121336325,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0.243106717068294,1.25767897576789,0.735374033800057,2.00022055021454,0.412070114477788,0.64183841918363,0.252697211763798,0.760437899670719,1.13175804831646,0.936415074698824,1.02440243847791,0.918967503289812,1.42888107384922,0.347652977834566,0.578727661391115,0.412085900803307,1.17759136107518,0.685738504770831,1.59728225543404,0.715308569841963,0.872078499793971,0.941093804153306,0.846146078916765,0.365855945745545,0.526139422875686,0.950628796921032,0,0.593175090620871,0.689531376628944,1.22769312950907,0.929621047115796,0.192906610981141,0.249810577937946,0.935726433781634,1.71896843238639,1.3390183244819,0.882365676478062,2.08681052058379 | |phase1_expression=6.72625157840135,0.348975407639361,0.454999239389536,0,0.500895729946347,0.671517087647559,1.63528848416868,44.805793234227,16.7538579360483,17.0867104215055,5.82141091966717,5.18519033469687,30.1313284678922,23.6035086531293,3.66420737997229,6.88415909125408,2.09868563438444,29.6534435436743,27.834230021965,28.8584963222661,0.340173160604279,0.0992909512008853,0,4.95976510659561,2.52350209173887,0.57423196411502,0.430761996159075,1.50829862880122,1.14014051673824,1.76421090831952,1.33038306393183,0,0,0,0.288851619751275,0,0,0.418531630736908,0.7813353445238,2.09409497589519,0,0.683045484958446,0.971020706062307,0,0,0,0,0,0,0,0,0,17.4493910300046,20.3101399763176,19.1573465511204,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0.285650984403804,1.98781686856452,0,0,0,0,0.255374676170375,0,0,0,0.52091337055676,0,0,0,2.06240009831567,1.56608848879013,0.186399445825301,0.832988126665025,0.906858721281426,0,0.860423876981386,0,0,0,0,1.40444420131752,0,0,0,21.2673563862788,0,0,0,0,0,0,1.02765491747154,44.0194402200192,0.593768556259299,0.520455980298408,0.608930956624282,0.230615497256059,0.60289056221049,0.940709657085638,0,0,0.578397427679647,1.76922110389975,0.161766849947409,0.220841518460394,0.484875253135222,0,0,0,0.255457055208591,37.3823188458471,20.3966928537759,30.8780651787547,0.149790639404823,0,0,0,0,0,0.324482526135515,0.203678727700633,1.36847667671102,0,0.631325567659422,0.130120442962704,0.229902104433473,0.180062129805349,0.452114453507145,0.408218994907967,0.640568601424249,0.562210347358373,0,0,0,0.175951124163949,0.657587197282725,1.11218899690239,1.39300866608867,0.823128545631774,0.199034266818493,9.83098462238529,11.8380037272769,11.6507034752193,0,0.234526059981096,0,0.23674473558521,0,0.154267112887378,0.232533944750408,0,0,0.16455984991348,0.492502392237286,0.162137619091711,0.730999937126662,0.439100230582101,0.134206418760372,0,0,0.991256348951394,0,0.213288250535234,0,0.257734922644187,0.201683524623343,0.667134131534611,0,0,0,1.00534083520108,0.596869416123452,0.38992817423824,0,0.864552199498777,1.39398891278057,0,0,0,0,0.387904974335251,0.0701358198903186,0,0.295220295959204,0,0,0.592905254174298,0.166845105716094,0.393117990226406,0,0.405720242777006,0.964708639009667,1.2731292589071,2.01387296215567,1.13494658742525,1.37280706594041,0,1.86070473834252,3.12037673114561,0,0.358794827043824,0.482443521363367,2.21703828199926,0.189491411770485,0.162964976442026,0,0,0,0.238043640886014,0,0.472905432318573,1.10732344824387,0.478364305972461,0.983179888294428,1.89953480052485,2.02508682014116,1.50791283939272,0,1.47529281905711,0.827810238914197,0.321101179975584,0.35163505977661,0,0.252470927204373,2.2085575359138,3.12350995437311,4.09304455692318,8.36390792833932,9.80314165962534,5.37845408498782,2.02405350837447,2.04579100537918,1.58115111178609,0,0.283880170416537,0.178065603667255,0.488660878060728,0.329940245945071,0,0,0,0,0,0.307435147943927,0.516856586336442,0,0.356497378384721,1.26414703174326,0,0,0,0,0,0,0,0.178368817602071,0.987294123612726,0.913394847343798,0.23467170806371,0,0.661585194164886,1.31909002353184,0.807322133479528,0.844380948994182,0.477489376012546,1.31312719796049,1.1659233465194,0.556275906031529,6.4930934703184,0.619160603889667,1.66675074632741,3.20226376907975,6.83471138605126,6.63456702298916,48.6138309782426,43.2449987680103,39.1105925866519,0,0.316335993581135,0.406638934253697,0.108005340821801,0,0.218362563746178,0.404593039154462,0.661227645802687,0.785267825952089,0.648074866458964,1.86401793926078,0,0,0.165458490457098,0,0.129159823477731,0,0.234714477291508,0,0,0,0,18.0126338758062,1.21635129174099,2.36235201479103,1.03936658382236,1.9692936523423,2.18549490259391,8.05309511783791,5.02144392393563,7.06765149637033,5.25826965919499,4.33552596088414,8.77120926657772,9.62118416403295,12.3889516312463,0,0,0,0,0.19318959403219,0.187682475451182,0.915758121336325,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0.243106717068294,1.25767897576789,0.735374033800057,2.00022055021454,0.412070114477788,0.64183841918363,0.252697211763798,0.760437899670719,1.13175804831646,0.936415074698824,1.02440243847791,0.918967503289812,1.42888107384922,0.347652977834566,0.578727661391115,0.412085900803307,1.17759136107518,0.685738504770831,1.59728225543404,0.715308569841963,0.872078499793971,0.941093804153306,0.846146078916765,0.365855945745545,0.526139422875686,0.950628796921032,0,0.593175090620871,0.689531376628944,1.22769312950907,0.929621047115796,0.192906610981141,0.249810577937946,0.935726433781634,1.71896843238639,1.3390183244819,0.882365676478062,2.08681052058379 | ||
|short_description=p1@uc007xsd.1 | |short_description=p1@uc007xsd.1 | ||
}} | }} |
Latest revision as of 23:06, 4 August 2015
Short description: | p1@uc007xsd.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_uc007xsd.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:640 |
Association with transcript: | 0bp_to_uc007xsd.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 8.70e-23 | 48 |
immune system | 8.70e-23 | 48 |
hematopoietic system | 3.23e-20 | 45 |
blood island | 3.23e-20 | 45 |
hemopoietic organ | 1.59e-16 | 29 |
immune organ | 1.59e-16 | 29 |
gland of gut | 2.72e-14 | 24 |
thymus | 9.78e-14 | 23 |
neck | 9.78e-14 | 23 |
respiratory system epithelium | 9.78e-14 | 23 |
hemolymphoid system gland | 9.78e-14 | 23 |
pharyngeal epithelium | 9.78e-14 | 23 |
thymic region | 9.78e-14 | 23 |
pharyngeal gland | 9.78e-14 | 23 |
entire pharyngeal arch endoderm | 9.78e-14 | 23 |
thymus primordium | 9.78e-14 | 23 |
early pharyngeal endoderm | 9.78e-14 | 23 |
pharynx | 7.08e-13 | 24 |
upper respiratory tract | 7.08e-13 | 24 |
chordate pharynx | 7.08e-13 | 24 |
pharyngeal arch system | 7.08e-13 | 24 |
pharyngeal region of foregut | 7.08e-13 | 24 |
mixed endoderm/mesoderm-derived structure | 3.24e-12 | 35 |
segment of respiratory tract | 1.06e-10 | 27 |
craniocervical region | 1.80e-09 | 36 |
respiratory system | 2.76e-08 | 42 |
anterior region of body | 3.98e-08 | 43 |
respiratory tract | 7.78e-08 | 41 |
autonomic nervous system | 1.23e-07 | 9 |
connective tissue | 2.72e-07 | 46 |
lateral plate mesoderm | 4.47e-07 | 87 |