FFCP PHASE1:Mm9::chr12:3806003..3806031,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=13435|HGNC=|MCL_coexpression_id=293|UniProt=|association_with_transcript=0bp_to_ENSMUST00000173700_5end|description=CAGE_peak_11_at_Dnmt3a_5end|id=chr12:3806003..3806031,+|ontology_enrichment_celltype=CL:0000540!9.91e-09!33;CL:0000047!9.91e-09!33;CL:0000031!9.91e-09!33;CL:0000404!9.91e-09!33;CL:0000117!1.00e-07!23;CL:0000337!1.00e-07!23|ontology_enrichment_celltype_v019_2=CL:0000117,5.14e-17,23;CL:0000337,5.14e-17,23;CL:0000540,5.58e-16,33;CL:0000047,5.58e-16,33;CL:0000031,5.58e-16,33;CL:0000404,5.58e-16,33;CL:0000393,7.79e-13,39;CL:0000211,7.79e-13,39;CL:0002319,3.11e-11,43;CL:0000221,7.03e-11,44;CL:0000133,7.03e-11,44;CL:0002612,1.87e-07,3;CL:0002610,2.51e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!8.82e-19!73;UBERON:0005743!8.82e-19!73;UBERON:0000073!3.01e-18!75;UBERON:0001016!3.01e-18!75;UBERON:0001049!1.30e-15!52;UBERON:0005068!1.30e-15!52;UBERON:0006241!1.30e-15!52;UBERON:0007135!1.30e-15!52;UBERON:0002346!1.65e-15!71;UBERON:0003075!1.65e-15!71;UBERON:0007284!1.65e-15!71;UBERON:0004121!6.70e-14!102;UBERON:0000924!6.70e-14!102;UBERON:0006601!6.70e-14!102;UBERON:0000955!1.11e-13!50;UBERON:0006238!1.11e-13!50;UBERON:0002616!2.27e-13!49;UBERON:0000033!9.69e-13!63;UBERON:0002020!1.18e-10!34;UBERON:0003080!8.40e-10!40;UBERON:0003056!8.93e-10!49;UBERON:0002780!3.33e-09!39;UBERON:0001890!3.33e-09!39;UBERON:0006240!3.33e-09!39;UBERON:0002791!2.84e-07!29;UBERON:0003528!2.84e-07!29;UBERON:0001893!2.84e-07!29;UBERON:0003076!3.20e-07!12;UBERON:0003057!3.20e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.08e-30,73;UBERON:0000073,3.74e-29,54;UBERON:0001016,4.36e-29,75;UBERON:0001049,7.22e-26,52;UBERON:0005068,7.22e-26,52;UBERON:0006241,7.22e-26,52;UBERON:0007135,7.22e-26,52;UBERON:0002346,5.58e-25,64;UBERON:0003075,5.58e-25,64;UBERON:0007284,5.58e-25,64;UBERON:0004121,1.00e-22,95;UBERON:0000924,1.00e-22,95;UBERON:0006601,1.00e-22,95;UBERON:0010371,5.97e-21,73;UBERON:0003076,1.29e-17,12;UBERON:0003057,1.29e-17,12;UBERON:0002616,1.01e-16,46;UBERON:0000955,3.01e-16,47;UBERON:0006238,3.01e-16,47;UBERON:0002020,3.57e-16,34;UBERON:0010314,4.81e-15,92;UBERON:0002240,1.27e-13,6;UBERON:0005174,1.27e-13,6;UBERON:0001137,1.27e-13,6;UBERON:0003080,2.79e-12,40;UBERON:0001948,8.14e-12,5;UBERON:0002315,8.14e-12,5;UBERON:0002780,4.08e-11,39;UBERON:0001890,4.08e-11,39;UBERON:0006240,4.08e-11,39;UBERON:0003056,1.59e-10,49;UBERON:0002021,2.52e-10,10;UBERON:0000411,2.52e-10,10;UBERON:0001950,2.52e-10,10;UBERON:0003528,3.62e-09,29;UBERON:0002791,3.62e-09,29;UBERON:0001893,3.62e-09,29;UBERON:0000025,5.03e-08,114;UBERON:0011216,5.06e-08,194;UBERON:0002950,5.54e-08,4;UBERON:0001891,5.54e-08,4;UBERON:0009616,5.54e-08,4;UBERON:0010286,5.54e-08,4;UBERON:0002420,1.07e-07,8;UBERON:0007245,1.07e-07,8;UBERON:0010009,1.07e-07,8;UBERON:0010011,1.07e-07,8;UBERON:0000454,1.07e-07,8;UBERON:0002257,1.87e-07,3;UBERON:0004684,2.51e-07,3;UBERON:0002275,2.51e-07,3;UBERON:0004111,4.56e-07,122|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41621522601718,0,1.90149421051854,0,0,0,0,0,0,0.384218305321555,0,0,0,11.1403883917483,12.3686382932904,0,0,0.919218786610021,8.8092704799511,2.042997409363,2.91852413186863,1.05509030184155,0.640413505216868,1.04182674111352,2.23346399201105,1.12552522006336,1.22238598221448,6.48182888042069,6.54909731675874,1.86399445825301,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0.148442139064825,0,0.304465478312141,0.230615497256059,0,0.352766121407114,0,0,0,0,0,0,0,0,4.09893115816166,3.14170060220183,0,0,0,0,2.09706895166752,1.83000241127451,0.502617408451458,0.347648640384553,2.04572365864264,1.87009240103604,3.56930778749067,0,0,0,0,0,0.229902104433473,0,0.150704817835715,0.136072998302656,0.640568601424249,0.187403449119458,2.06962696591213,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0.207125772535502,0,0.180062061461015,0,0.196764231747404,0,0,0,0,0,0.164167464079095,0,0.146199987425332,0,0,0.210289948564127,0.308713837137853,0,0,1.49301775374664,1.85789337488351,0.515469845288373,0.201683524623343,0.22237804384487,0,0,0,0,0.198956472041151,0.58489226135736,0,0,0,0.569003702859245,0.571242563048644,1.1270773567308,0.610953983535943,0.775809948670503,0.0701358198903186,0.316182685621286,0.295220295959204,0,0,0,0,0.196558995113203,0.224862112384854,0,0,0,0,0,0,0,0.372140947668503,0,0,0.179397413521912,0,0,0,0,0,0,0.335012514883631,0,0,0.157635144106191,0,0,0.163863314715738,0.172684981865896,0,0,0,0,0,3.53211297973142,5.86058432961016,0,0,1.57754109708128,0,1.93881057959519,0,0.222798674082394,0,0.404810701674894,1.75353514746787,0.790575555893047,0.321321316421807,0,0.178065603667255,0,0,1.32745138339963,0.485561272309963,0.604647113929502,0.565815239267694,0.295301892880773,0.307435147943927,0,1.09060118843252,0.356497378384721,0.316036757935816,0,0,0.680879211507576,0,0,0,1.41872186913819,0.535106452806212,1.15184314421485,0.608929898229199,0,0,0,0,0,0,0,0,0.291480836629851,2.41052892613663,0,0,0,0.188368457004691,0.136694227721025,0.228778173206523,0,0,0.138199973804424,0,1.10717597753397,0.203319467126849,0.324016022465404,0.418176592028937,0.218362563746178,0.269728692769641,0.165306911450672,0,0,0,0,0,0.330916980914195,0.388902376688095,0.129159823477731,0,0.352071715937262,0.2604087696879,0.209718688851422,0,0.288030006257865,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0.167884616364078,0,0,0,0,0,2.82375921308533,4.14292712856459,4.01026859407578,2.57779773515531,4.11049511862385,3.0215755895588,4.72515750162264,0.45032120322422,0.906284817968409,0,0.103787347584177,0,0.170733605754134,0.243106717068294,0.419226325255965,0,0,0.206035057238894,0.64183841918363,0.252697211763798,0.50695859978048,0.377252682772152,0.187283014939765,0.192075457214608,0.287177344778066,0.952587382566147,0.115884325944855,0.38581844092741,0,0.441596760403192,0,0,0.238436189947321,0,0.282328141245992,0.423073039458382,0.73171189149109,0,0.407412341537585,1.68342681497322,0.355905054372522,0.197008964751127,0,0.154936841185966,0.385813221962283,0.749431733813838,0,0,0.191288332068843,0.661774257358546,0|short_description=p11@Dnmt3a}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:13435 | |||
|HGNC= | |||
|MCL_coexpression_id=293 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000173700_5end | |||
|cluster_id=chr12:3806003..3806031,+ | |||
|description=CAGE_peak_11_at_Dnmt3a_5end | |||
|id=chr12:3806003..3806031,+ | |||
|ontology_enrichment_celltype=CL:0000540!9.91e-09!33;CL:0000047!9.91e-09!33;CL:0000031!9.91e-09!33;CL:0000404!9.91e-09!33;CL:0000117!1.00e-07!23;CL:0000337!1.00e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.14e-17,23;CL:0000337,5.14e-17,23;CL:0000540,5.58e-16,33;CL:0000047,5.58e-16,33;CL:0000031,5.58e-16,33;CL:0000404,5.58e-16,33;CL:0000393,7.79e-13,39;CL:0000211,7.79e-13,39;CL:0002319,3.11e-11,43;CL:0000221,7.03e-11,44;CL:0000133,7.03e-11,44;CL:0002612,1.87e-07,3;CL:0002610,2.51e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!8.82e-19!73;UBERON:0005743!8.82e-19!73;UBERON:0000073!3.01e-18!75;UBERON:0001016!3.01e-18!75;UBERON:0001049!1.30e-15!52;UBERON:0005068!1.30e-15!52;UBERON:0006241!1.30e-15!52;UBERON:0007135!1.30e-15!52;UBERON:0002346!1.65e-15!71;UBERON:0003075!1.65e-15!71;UBERON:0007284!1.65e-15!71;UBERON:0004121!6.70e-14!102;UBERON:0000924!6.70e-14!102;UBERON:0006601!6.70e-14!102;UBERON:0000955!1.11e-13!50;UBERON:0006238!1.11e-13!50;UBERON:0002616!2.27e-13!49;UBERON:0000033!9.69e-13!63;UBERON:0002020!1.18e-10!34;UBERON:0003080!8.40e-10!40;UBERON:0003056!8.93e-10!49;UBERON:0002780!3.33e-09!39;UBERON:0001890!3.33e-09!39;UBERON:0006240!3.33e-09!39;UBERON:0002791!2.84e-07!29;UBERON:0003528!2.84e-07!29;UBERON:0001893!2.84e-07!29;UBERON:0003076!3.20e-07!12;UBERON:0003057!3.20e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.08e-30,73;UBERON:0000073,3.74e-29,54;UBERON:0001016,4.36e-29,75;UBERON:0001049,7.22e-26,52;UBERON:0005068,7.22e-26,52;UBERON:0006241,7.22e-26,52;UBERON:0007135,7.22e-26,52;UBERON:0002346,5.58e-25,64;UBERON:0003075,5.58e-25,64;UBERON:0007284,5.58e-25,64;UBERON:0004121,1.00e-22,95;UBERON:0000924,1.00e-22,95;UBERON:0006601,1.00e-22,95;UBERON:0010371,5.97e-21,73;UBERON:0003076,1.29e-17,12;UBERON:0003057,1.29e-17,12;UBERON:0002616,1.01e-16,46;UBERON:0000955,3.01e-16,47;UBERON:0006238,3.01e-16,47;UBERON:0002020,3.57e-16,34;UBERON:0010314,4.81e-15,92;UBERON:0002240,1.27e-13,6;UBERON:0005174,1.27e-13,6;UBERON:0001137,1.27e-13,6;UBERON:0003080,2.79e-12,40;UBERON:0001948,8.14e-12,5;UBERON:0002315,8.14e-12,5;UBERON:0002780,4.08e-11,39;UBERON:0001890,4.08e-11,39;UBERON:0006240,4.08e-11,39;UBERON:0003056,1.59e-10,49;UBERON:0002021,2.52e-10,10;UBERON:0000411,2.52e-10,10;UBERON:0001950,2.52e-10,10;UBERON:0003528,3.62e-09,29;UBERON:0002791,3.62e-09,29;UBERON:0001893,3.62e-09,29;UBERON:0000025,5.03e-08,114;UBERON:0011216,5.06e-08,194;UBERON:0002950,5.54e-08,4;UBERON:0001891,5.54e-08,4;UBERON:0009616,5.54e-08,4;UBERON:0010286,5.54e-08,4;UBERON:0002420,1.07e-07,8;UBERON:0007245,1.07e-07,8;UBERON:0010009,1.07e-07,8;UBERON:0010011,1.07e-07,8;UBERON:0000454,1.07e-07,8;UBERON:0002257,1.87e-07,3;UBERON:0004684,2.51e-07,3;UBERON:0002275,2.51e-07,3;UBERON:0004111,4.56e-07,122 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41621522601718,0,1.90149421051854,0,0,0,0,0,0,0.384218305321555,0,0,0,11.1403883917483,12.3686382932904,0,0,0.919218786610021,8.8092704799511,2.042997409363,2.91852413186863,1.05509030184155,0.640413505216868,1.04182674111352,2.23346399201105,1.12552522006336,1.22238598221448,6.48182888042069,6.54909731675874,1.86399445825301,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0.148442139064825,0,0.304465478312141,0.230615497256059,0,0.352766121407114,0,0,0,0,0,0,0,0,4.09893115816166,3.14170060220183,0,0,0,0,2.09706895166752,1.83000241127451,0.502617408451458,0.347648640384553,2.04572365864264,1.87009240103604,3.56930778749067,0,0,0,0,0,0.229902104433473,0,0.150704817835715,0.136072998302656,0.640568601424249,0.187403449119458,2.06962696591213,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0.207125772535502,0,0.180062061461015,0,0.196764231747404,0,0,0,0,0,0.164167464079095,0,0.146199987425332,0,0,0.210289948564127,0.308713837137853,0,0,1.49301775374664,1.85789337488351,0.515469845288373,0.201683524623343,0.22237804384487,0,0,0,0,0.198956472041151,0.58489226135736,0,0,0,0.569003702859245,0.571242563048644,1.1270773567308,0.610953983535943,0.775809948670503,0.0701358198903186,0.316182685621286,0.295220295959204,0,0,0,0,0.196558995113203,0.224862112384854,0,0,0,0,0,0,0,0.372140947668503,0,0,0.179397413521912,0,0,0,0,0,0,0.335012514883631,0,0,0.157635144106191,0,0,0.163863314715738,0.172684981865896,0,0,0,0,0,3.53211297973142,5.86058432961016,0,0,1.57754109708128,0,1.93881057959519,0,0.222798674082394,0,0.404810701674894,1.75353514746787,0.790575555893047,0.321321316421807,0,0.178065603667255,0,0,1.32745138339963,0.485561272309963,0.604647113929502,0.565815239267694,0.295301892880773,0.307435147943927,0,1.09060118843252,0.356497378384721,0.316036757935816,0,0,0.680879211507576,0,0,0,1.41872186913819,0.535106452806212,1.15184314421485,0.608929898229199,0,0,0,0,0,0,0,0,0.291480836629851,2.41052892613663,0,0,0,0.188368457004691,0.136694227721025,0.228778173206523,0,0,0.138199973804424,0,1.10717597753397,0.203319467126849,0.324016022465404,0.418176592028937,0.218362563746178,0.269728692769641,0.165306911450672,0,0,0,0,0,0.330916980914195,0.388902376688095,0.129159823477731,0,0.352071715937262,0.2604087696879,0.209718688851422,0,0.288030006257865,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0.167884616364078,0,0,0,0,0,2.82375921308533,4.14292712856459,4.01026859407578,2.57779773515531,4.11049511862385,3.0215755895588,4.72515750162264,0.45032120322422,0.906284817968409,0,0.103787347584177,0,0.170733605754134,0.243106717068294,0.419226325255965,0,0,0.206035057238894,0.64183841918363,0.252697211763798,0.50695859978048,0.377252682772152,0.187283014939765,0.192075457214608,0.287177344778066,0.952587382566147,0.115884325944855,0.38581844092741,0,0.441596760403192,0,0,0.238436189947321,0,0.282328141245992,0.423073039458382,0.73171189149109,0,0.407412341537585,1.68342681497322,0.355905054372522,0.197008964751127,0,0.154936841185966,0.385813221962283,0.749431733813838,0,0,0.191288332068843,0.661774257358546,0 | |||
|short_description=p11@Dnmt3a | |||
}} |
Revision as of 00:35, 5 August 2015
Short description: | p11@Dnmt3a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_Dnmt3a_5end |
Coexpression cluster: | MCL_coexpression_mm9:293 |
Association with transcript: | 0bp_to_ENSMUST00000173700_5end |
EntrezGene: | 13435 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.14e-17 | 23 |
neuroblast (sensu Vertebrata) | 5.14e-17 | 23 |
neuron | 5.58e-16 | 33 |
neuronal stem cell | 5.58e-16 | 33 |
neuroblast | 5.58e-16 | 33 |
electrically signaling cell | 5.58e-16 | 33 |
electrically responsive cell | 7.79e-13 | 39 |
electrically active cell | 7.79e-13 | 39 |
neural cell | 3.11e-11 | 43 |
ectodermal cell | 7.03e-11 | 44 |
neurectodermal cell | 7.03e-11 | 44 |
neuron of the ventral spinal cord | 1.87e-07 | 3 |
raphe nuclei neuron | 2.51e-07 | 3 |