FFCP PHASE1:Mm9::chr2:3208787..3208789,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=432|UniProt=|association_with_transcript=0bp_to_ENSMUST00000082795_5end|description=CAGE_peak_1_at_ENSMUST00000082795_5end|id=chr2:3208787..3208789,-|ontology_enrichment_celltype=CL:0000548!2.34e-37!115;CL:0000004!2.34e-37!115;CL:0000255!2.34e-37!115;CL:0002371!1.34e-35!118;CL:0000723!5.98e-34!91;CL:0000048!5.98e-34!91;CL:0000144!6.20e-34!121;CL:0000012!6.20e-34!121;CL:0000034!2.34e-33!97;CL:0002319!2.18e-26!43;CL:0000221!2.11e-25!44;CL:0000133!2.11e-25!44;CL:0000055!2.61e-25!50;CL:0002321!7.12e-24!70;CL:0000220!7.12e-24!70;CL:0000540!6.50e-22!33;CL:0000047!6.50e-22!33;CL:0000031!6.50e-22!33;CL:0000404!6.50e-22!33;CL:0000393!1.61e-21!39;CL:0000211!1.61e-21!39;CL:0000219!5.06e-18!54;CL:0000117!6.99e-17!23;CL:0000337!6.99e-17!23;CL:0002320!6.84e-15!46;CL:0000134!6.84e-15!46;CL:0002031!7.66e-12!25;CL:0000063!5.93e-10!66;CL:0000839!2.80e-09!13;CL:0000988!6.08e-09!32;CL:0002032!6.08e-09!32;CL:0000037!6.08e-09!32;CL:0000566!6.08e-09!32;CL:0000837!6.08e-09!32;CL:0000763!1.16e-07!16;CL:0000107!3.49e-07!9;CL:0000414!4.13e-07!11|ontology_enrichment_celltype_v019_2=CL:0002319,8.72e-35,43;CL:0000723,7.52e-34,91;CL:0000048,7.52e-34,91;CL:0000221,1.06e-33,44;CL:0000133,1.06e-33,44;CL:0002321,6.46e-32,70;CL:0000034,7.69e-32,97;CL:0000393,6.29e-30,39;CL:0000211,6.29e-30,39;CL:0000540,9.26e-30,33;CL:0000047,9.26e-30,33;CL:0000031,9.26e-30,33;CL:0000404,9.26e-30,33;CL:0000117,1.40e-22,23;CL:0000337,1.40e-22,23;CL:0000219,3.87e-12,54;CL:0000107,2.80e-09,9;CL:0000839,3.17e-09,13;CL:0002320,3.48e-09,46;CL:0000134,3.48e-09,46;CL:0002453,5.93e-08,8;CL:0000763,5.75e-07,16|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.68e-24!73;UBERON:0005743!1.68e-24!73;UBERON:0000073!3.61e-24!75;UBERON:0001016!3.61e-24!75;UBERON:0002020!2.92e-16!34;UBERON:0002384!6.84e-15!46;UBERON:0004121!2.03e-13!102;UBERON:0000924!2.03e-13!102;UBERON:0006601!2.03e-13!102;UBERON:0002791!6.69e-13!29;UBERON:0003528!6.69e-13!29;UBERON:0001893!6.69e-13!29;UBERON:0001049!2.69e-12!52;UBERON:0005068!2.69e-12!52;UBERON:0006241!2.69e-12!52;UBERON:0007135!2.69e-12!52;UBERON:0000955!5.94e-12!50;UBERON:0006238!5.94e-12!50;UBERON:0002616!1.13e-11!49;UBERON:0000956!3.20e-10!21;UBERON:0001869!3.20e-10!21;UBERON:0000203!3.20e-10!21;UBERON:0003080!4.70e-10!40;UBERON:0002780!6.61e-10!39;UBERON:0001890!6.61e-10!39;UBERON:0006240!6.61e-10!39;UBERON:0002619!1.57e-09!17;UBERON:0002346!6.95e-09!71;UBERON:0003075!6.95e-09!71;UBERON:0007284!6.95e-09!71;UBERON:0002021!1.24e-08!10;UBERON:0000411!1.24e-08!10;UBERON:0001950!1.24e-08!10;UBERON:0002371!1.02e-07!16;UBERON:0000033!1.26e-07!63;UBERON:0002410!3.49e-07!9;UBERON:0003056!4.66e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.13e-29,73;UBERON:0001016,4.85e-28,75;UBERON:0002020,7.71e-23,34;UBERON:0004121,5.91e-19,95;UBERON:0000924,5.91e-19,95;UBERON:0006601,5.91e-19,95;UBERON:0003528,3.63e-18,29;UBERON:0002791,3.63e-18,29;UBERON:0001893,3.63e-18,29;UBERON:0000073,6.12e-17,54;UBERON:0000956,4.45e-14,21;UBERON:0001869,4.45e-14,21;UBERON:0000203,4.45e-14,21;UBERON:0001049,5.19e-14,52;UBERON:0005068,5.19e-14,52;UBERON:0006241,5.19e-14,52;UBERON:0007135,5.19e-14,52;UBERON:0002619,6.06e-13,17;UBERON:0002346,1.49e-12,64;UBERON:0003075,1.49e-12,64;UBERON:0007284,1.49e-12,64;UBERON:0002780,1.30e-11,39;UBERON:0001890,1.30e-11,39;UBERON:0006240,1.30e-11,39;UBERON:0002021,2.93e-11,10;UBERON:0000411,2.93e-11,10;UBERON:0001950,2.93e-11,10;UBERON:0003080,3.82e-11,40;UBERON:0002616,8.99e-11,46;UBERON:0000955,2.20e-10,47;UBERON:0006238,2.20e-10,47;UBERON:0010371,8.24e-10,73;UBERON:0002410,2.80e-09,9;UBERON:0002384,3.48e-09,46;UBERON:0010314,4.49e-08,92;UBERON:0003056,7.46e-08,49;UBERON:0000010,3.30e-07,11;UBERON:0002371,4.97e-07,16|phase1_expression=0,0,0,0.30246421130683,1.50268718983904,0,0,1.54947988129892,0.985521055061667,2.10658073689794,0.513653904676515,0.478632953972018,0.856003649656029,0.961624426608971,8.99396356902289,0.607425802169478,3.49780939064073,0.946386496074713,1.09691546884591,5.51706547337439,0,0.397163804803541,0.522399578277871,0.159992422793407,0.45881856213434,0,0,0,0.190023419456374,0,0,29.8464416526027,33.8285633171514,174.329849116983,0,0,0,0,0,0,0,0.683045484958446,0,0,0,0,12.5182615095686,5.45062890951116,2.41654801007919,9.72149495371417,3.63964696225943,12.9377307928474,0,0.725362142011344,1.00828139742739,14.9210472900849,22.0630748752843,43.3164557513052,2.42779753031517,86.2255296213414,15.8457850876545,2.37191172448392,8.00365316500025,26.996991518442,131.519226221408,146.358903678897,50.6324186776104,5.37905627450176,1.76272340924412,7.69533848490637,7.36137364729837,12.8542942981712,15.4607978666129,4.5321595709533,9.39285615978716,23.8996884518605,6.60695285996332,19.9192247412893,21.5049146558741,7.51751840062105,12.5338071735301,5.73004707612436,37.4105218661851,47.8348218526928,36.8243777142112,53.0331453852602,5.97961059356232,3.54158947068071,0.227178579999552,0,0.869593466105033,0,9.51959867190851,64.2246798049002,16.2444104361917,10.7526452903361,0,0,1.03914401841148,1.06001872353102,0,0,0,0,2.59789249213457,2.28023878927589,3.53867111510348,0,0,0,0,0,0,0.150722640552623,0,0,0,0,0.884610551949874,0,0,0,0,0,0.209446706813455,0,0,0,0.127070227073065,0.149790639404823,0,0,0,0,0,0.162241263067758,0,0,0,0,0,0.229902104433473,0,0,0,0,0,0,0,0.378212160335639,0,0,0,0,0,0.199034266818493,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405720242777006,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0.163863314715738,0,0,15.0791283939272,12.5098307278303,0,0,0,0,0,0,7.2566890465739,7.02789739733949,22.6194567619439,9.31978312014953,13.1451217708613,10.7569081699756,8.50102473517278,4.9683495844923,22.9266911208984,0.321321316421807,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0.356497378384721,0,0,1.03135543248187,0,0,0.129358683782755,0,0,0.178368817602071,0,0.304464949114599,0,0.21183207086382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,1.33191572024439,0.269141569828427,0.671538465456314,0,0,0,0,0,10.7302850097243,8.74617949363636,13.1765968091061,4.29632955859219,42.4751162257798,38.5250887668747,21.6007200074178,12.158672487054,18.5788387683524,17.6038505995619,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0|short_description=p1@ENSMUST00000082795}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=432 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000082795_5end | |||
|cluster_id=chr2:3208787..3208789,- | |||
|description=CAGE_peak_1_at_ENSMUST00000082795_5end | |||
|id=chr2:3208787..3208789,- | |||
|ontology_enrichment_celltype=CL:0000548!2.34e-37!115;CL:0000004!2.34e-37!115;CL:0000255!2.34e-37!115;CL:0002371!1.34e-35!118;CL:0000723!5.98e-34!91;CL:0000048!5.98e-34!91;CL:0000144!6.20e-34!121;CL:0000012!6.20e-34!121;CL:0000034!2.34e-33!97;CL:0002319!2.18e-26!43;CL:0000221!2.11e-25!44;CL:0000133!2.11e-25!44;CL:0000055!2.61e-25!50;CL:0002321!7.12e-24!70;CL:0000220!7.12e-24!70;CL:0000540!6.50e-22!33;CL:0000047!6.50e-22!33;CL:0000031!6.50e-22!33;CL:0000404!6.50e-22!33;CL:0000393!1.61e-21!39;CL:0000211!1.61e-21!39;CL:0000219!5.06e-18!54;CL:0000117!6.99e-17!23;CL:0000337!6.99e-17!23;CL:0002320!6.84e-15!46;CL:0000134!6.84e-15!46;CL:0002031!7.66e-12!25;CL:0000063!5.93e-10!66;CL:0000839!2.80e-09!13;CL:0000988!6.08e-09!32;CL:0002032!6.08e-09!32;CL:0000037!6.08e-09!32;CL:0000566!6.08e-09!32;CL:0000837!6.08e-09!32;CL:0000763!1.16e-07!16;CL:0000107!3.49e-07!9;CL:0000414!4.13e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,8.72e-35,43;CL:0000723,7.52e-34,91;CL:0000048,7.52e-34,91;CL:0000221,1.06e-33,44;CL:0000133,1.06e-33,44;CL:0002321,6.46e-32,70;CL:0000034,7.69e-32,97;CL:0000393,6.29e-30,39;CL:0000211,6.29e-30,39;CL:0000540,9.26e-30,33;CL:0000047,9.26e-30,33;CL:0000031,9.26e-30,33;CL:0000404,9.26e-30,33;CL:0000117,1.40e-22,23;CL:0000337,1.40e-22,23;CL:0000219,3.87e-12,54;CL:0000107,2.80e-09,9;CL:0000839,3.17e-09,13;CL:0002320,3.48e-09,46;CL:0000134,3.48e-09,46;CL:0002453,5.93e-08,8;CL:0000763,5.75e-07,16 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.68e-24!73;UBERON:0005743!1.68e-24!73;UBERON:0000073!3.61e-24!75;UBERON:0001016!3.61e-24!75;UBERON:0002020!2.92e-16!34;UBERON:0002384!6.84e-15!46;UBERON:0004121!2.03e-13!102;UBERON:0000924!2.03e-13!102;UBERON:0006601!2.03e-13!102;UBERON:0002791!6.69e-13!29;UBERON:0003528!6.69e-13!29;UBERON:0001893!6.69e-13!29;UBERON:0001049!2.69e-12!52;UBERON:0005068!2.69e-12!52;UBERON:0006241!2.69e-12!52;UBERON:0007135!2.69e-12!52;UBERON:0000955!5.94e-12!50;UBERON:0006238!5.94e-12!50;UBERON:0002616!1.13e-11!49;UBERON:0000956!3.20e-10!21;UBERON:0001869!3.20e-10!21;UBERON:0000203!3.20e-10!21;UBERON:0003080!4.70e-10!40;UBERON:0002780!6.61e-10!39;UBERON:0001890!6.61e-10!39;UBERON:0006240!6.61e-10!39;UBERON:0002619!1.57e-09!17;UBERON:0002346!6.95e-09!71;UBERON:0003075!6.95e-09!71;UBERON:0007284!6.95e-09!71;UBERON:0002021!1.24e-08!10;UBERON:0000411!1.24e-08!10;UBERON:0001950!1.24e-08!10;UBERON:0002371!1.02e-07!16;UBERON:0000033!1.26e-07!63;UBERON:0002410!3.49e-07!9;UBERON:0003056!4.66e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.13e-29,73;UBERON:0001016,4.85e-28,75;UBERON:0002020,7.71e-23,34;UBERON:0004121,5.91e-19,95;UBERON:0000924,5.91e-19,95;UBERON:0006601,5.91e-19,95;UBERON:0003528,3.63e-18,29;UBERON:0002791,3.63e-18,29;UBERON:0001893,3.63e-18,29;UBERON:0000073,6.12e-17,54;UBERON:0000956,4.45e-14,21;UBERON:0001869,4.45e-14,21;UBERON:0000203,4.45e-14,21;UBERON:0001049,5.19e-14,52;UBERON:0005068,5.19e-14,52;UBERON:0006241,5.19e-14,52;UBERON:0007135,5.19e-14,52;UBERON:0002619,6.06e-13,17;UBERON:0002346,1.49e-12,64;UBERON:0003075,1.49e-12,64;UBERON:0007284,1.49e-12,64;UBERON:0002780,1.30e-11,39;UBERON:0001890,1.30e-11,39;UBERON:0006240,1.30e-11,39;UBERON:0002021,2.93e-11,10;UBERON:0000411,2.93e-11,10;UBERON:0001950,2.93e-11,10;UBERON:0003080,3.82e-11,40;UBERON:0002616,8.99e-11,46;UBERON:0000955,2.20e-10,47;UBERON:0006238,2.20e-10,47;UBERON:0010371,8.24e-10,73;UBERON:0002410,2.80e-09,9;UBERON:0002384,3.48e-09,46;UBERON:0010314,4.49e-08,92;UBERON:0003056,7.46e-08,49;UBERON:0000010,3.30e-07,11;UBERON:0002371,4.97e-07,16 | |||
|phase1_expression=0,0,0,0.30246421130683,1.50268718983904,0,0,1.54947988129892,0.985521055061667,2.10658073689794,0.513653904676515,0.478632953972018,0.856003649656029,0.961624426608971,8.99396356902289,0.607425802169478,3.49780939064073,0.946386496074713,1.09691546884591,5.51706547337439,0,0.397163804803541,0.522399578277871,0.159992422793407,0.45881856213434,0,0,0,0.190023419456374,0,0,29.8464416526027,33.8285633171514,174.329849116983,0,0,0,0,0,0,0,0.683045484958446,0,0,0,0,12.5182615095686,5.45062890951116,2.41654801007919,9.72149495371417,3.63964696225943,12.9377307928474,0,0.725362142011344,1.00828139742739,14.9210472900849,22.0630748752843,43.3164557513052,2.42779753031517,86.2255296213414,15.8457850876545,2.37191172448392,8.00365316500025,26.996991518442,131.519226221408,146.358903678897,50.6324186776104,5.37905627450176,1.76272340924412,7.69533848490637,7.36137364729837,12.8542942981712,15.4607978666129,4.5321595709533,9.39285615978716,23.8996884518605,6.60695285996332,19.9192247412893,21.5049146558741,7.51751840062105,12.5338071735301,5.73004707612436,37.4105218661851,47.8348218526928,36.8243777142112,53.0331453852602,5.97961059356232,3.54158947068071,0.227178579999552,0,0.869593466105033,0,9.51959867190851,64.2246798049002,16.2444104361917,10.7526452903361,0,0,1.03914401841148,1.06001872353102,0,0,0,0,2.59789249213457,2.28023878927589,3.53867111510348,0,0,0,0,0,0,0.150722640552623,0,0,0,0,0.884610551949874,0,0,0,0,0,0.209446706813455,0,0,0,0.127070227073065,0.149790639404823,0,0,0,0,0,0.162241263067758,0,0,0,0,0,0.229902104433473,0,0,0,0,0,0,0,0.378212160335639,0,0,0,0,0,0.199034266818493,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405720242777006,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0.163863314715738,0,0,15.0791283939272,12.5098307278303,0,0,0,0,0,0,7.2566890465739,7.02789739733949,22.6194567619439,9.31978312014953,13.1451217708613,10.7569081699756,8.50102473517278,4.9683495844923,22.9266911208984,0.321321316421807,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0.356497378384721,0,0,1.03135543248187,0,0,0.129358683782755,0,0,0.178368817602071,0,0.304464949114599,0,0.21183207086382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,1.33191572024439,0.269141569828427,0.671538465456314,0,0,0,0,0,10.7302850097243,8.74617949363636,13.1765968091061,4.29632955859219,42.4751162257798,38.5250887668747,21.6007200074178,12.158672487054,18.5788387683524,17.6038505995619,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0 | |||
|short_description=p1@ENSMUST00000082795 | |||
}} |
Latest revision as of 01:09, 5 August 2015
Short description: | p1@ENSMUST00000082795 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000082795_5end |
Coexpression cluster: | MCL_coexpression_mm9:432 |
Association with transcript: | 0bp_to_ENSMUST00000082795_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 8.72e-35 | 43 |
somatic stem cell | 7.52e-34 | 91 |
multi fate stem cell | 7.52e-34 | 91 |
ectodermal cell | 1.06e-33 | 44 |
neurectodermal cell | 1.06e-33 | 44 |
embryonic cell | 6.46e-32 | 70 |
stem cell | 7.69e-32 | 97 |
electrically responsive cell | 6.29e-30 | 39 |
electrically active cell | 6.29e-30 | 39 |
neuron | 9.26e-30 | 33 |
neuronal stem cell | 9.26e-30 | 33 |
neuroblast | 9.26e-30 | 33 |
electrically signaling cell | 9.26e-30 | 33 |
CNS neuron (sensu Vertebrata) | 1.40e-22 | 23 |
neuroblast (sensu Vertebrata) | 1.40e-22 | 23 |
motile cell | 3.87e-12 | 54 |
autonomic neuron | 2.80e-09 | 9 |
myeloid lineage restricted progenitor cell | 3.17e-09 | 13 |
connective tissue cell | 3.48e-09 | 46 |
mesenchymal cell | 3.48e-09 | 46 |
oligodendrocyte precursor cell | 5.93e-08 | 8 |
myeloid cell | 5.75e-07 | 16 |