FFCP PHASE1:Mm9::chr17:56552184..56552196,-: Difference between revisions
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|id=chr17:56552184..56552196,-
|short_description=p@chr17:56552184..56552196,-
|description=CAGE_peak_at_chr17:56552184..56552196,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:56552184..56552196,- | |||
|description=CAGE_peak_at_chr17:56552184..56552196,- | |||
|id=chr17:56552184..56552196,- | |||
|ontology_enrichment_celltype=CL:0000221!9.54e-09!44;CL:0000133!9.54e-09!44;CL:0002319!1.86e-08!43;CL:0000117!3.03e-08!23;CL:0000337!3.03e-08!23;CL:0000055!2.13e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,2.24e-15,6;CL:0000126,2.24e-15,6;CL:0000127,2.24e-15,6;CL:0002319,2.39e-14,43;CL:0002608,3.65e-14,3;CL:0000221,5.11e-14,44;CL:0000133,5.11e-14,44;CL:0002453,1.05e-11,8;CL:0000117,8.65e-11,23;CL:0000337,8.65e-11,23;CL:0000333,1.73e-09,10;CL:0000095,1.73e-09,10;CL:0000243,1.73e-09,10;CL:0000123,1.73e-09,10;CL:0000125,1.73e-09,10;CL:0000030,1.73e-09,10;CL:0000339,1.73e-09,10;CL:0002321,1.04e-08,70;CL:0000540,1.50e-07,33;CL:0000047,1.50e-07,33;CL:0000031,1.50e-07,33;CL:0000404,1.50e-07,33;CL:0002609,1.51e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.39e-12!75;UBERON:0001016!1.39e-12!75;UBERON:0001017!2.04e-12!73;UBERON:0005743!2.04e-12!73;UBERON:0002346!3.82e-12!71;UBERON:0003075!3.82e-12!71;UBERON:0007284!3.82e-12!71;UBERON:0004121!9.46e-12!102;UBERON:0000924!9.46e-12!102;UBERON:0006601!9.46e-12!102;UBERON:0000033!4.14e-11!63;UBERON:0003056!1.27e-10!49;UBERON:0001049!1.58e-10!52;UBERON:0005068!1.58e-10!52;UBERON:0006241!1.58e-10!52;UBERON:0007135!1.58e-10!52;UBERON:0002616!2.71e-10!49;UBERON:0002020!5.78e-10!34;UBERON:0000955!6.91e-10!50;UBERON:0006238!6.91e-10!50;UBERON:0003080!1.04e-09!40;UBERON:0002780!2.10e-09!39;UBERON:0001890!2.10e-09!39;UBERON:0006240!2.10e-09!39;UBERON:0002791!2.76e-07!29;UBERON:0003528!2.76e-07!29;UBERON:0001893!2.76e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001954,2.54e-13,7;UBERON:0003022,2.54e-13,7;UBERON:0002421,2.54e-13,7;UBERON:0000349,2.54e-13,7;UBERON:0002600,2.54e-13,7;UBERON:0001017,1.45e-10,73;UBERON:0001016,2.82e-10,75;UBERON:0002619,1.45e-09,17;UBERON:0000073,9.88e-09,54;UBERON:0003528,1.29e-08,29;UBERON:0002791,1.29e-08,29;UBERON:0001893,1.29e-08,29;UBERON:0004121,4.90e-08,95;UBERON:0000924,4.90e-08,95;UBERON:0006601,4.90e-08,95;UBERON:0000956,8.32e-08,21;UBERON:0001869,8.32e-08,21;UBERON:0000203,8.32e-08,21;UBERON:0002616,1.09e-07,46;UBERON:0000955,1.60e-07,47;UBERON:0006238,1.60e-07,47;UBERON:0002020,2.33e-07,34;UBERON:0001049,8.74e-07,52;UBERON:0005068,8.74e-07,52;UBERON:0006241,8.74e-07,52;UBERON:0007135,8.74e-07,52 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0.183546752161682,0,5.23260375313072,0.219686182734472,2.72201858703997,1.95980990275508,0,0,0,0,0,0,0,0.404632921719196,0,2.53532561402472,0,0,0,0,0,0.299600110518405,0,0,0.405017814995072,0,0.285650984403804,0.220868540951614,0,3.54628242767475,2.75765635983006,1.10115880999389,0.766124028511126,0.307213066512487,0,3.93396867490361,0,0.558365998002762,0,0.763991238884051,0.589257170947335,0.427115042397309,0.186399445825301,0,0.302286240427142,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0.173485326766136,0.608930956624282,0.230615497256059,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0.11981512450592,0,0,0.149790639404823,0,0.251308704225729,0.521472960576829,0,0.41557608911912,0.162241263067758,0,0.124406970610093,0.252722758433675,0.210441855886474,0.260240885925407,0.229902104433473,0,0.452114453507145,0,0.512454881139399,0,0,0,0,0,0.219195732427575,0.278047249225598,0,0,0.199034266818493,0.702213187313235,0.257347907114715,0,0,0,0.180062061461015,0,0.196764231747404,0.154267112887378,0.465067889500816,0,0,0.16455984991348,0.164167464079095,0,0,0,0,0.210289948564127,0.102904612379284,0,0,0,0.232236671860439,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0.456994050438915,0,0.407302655690628,0,0.0701358198903186,0.0632365371242573,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0.169745085775188,0,0,0,0,0,0.44292937929755,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0.315508219416257,0,0.215423397732799,0,0,0,0,0,0,0,0,0.35613120733451,0,0,0,0,0.302323556964751,0,0,0,0,0.363533729477506,0,0,0,0,0,0.36012218806262,0.258717367565509,0.214337035031592,0,0.356737635204141,0,0.304464949114599,0,0,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0.169978429993855,0,0,0.954670618015114,0,0,0,0.418176592028937,0,0,0.0826534557253359,0,0,0,0,0,0,0,0.129159823477731,0.337912250981556,0.117357238645754,0,0,0,0,0,0,0.205421914329655,0.129920822977795,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0.0897138566094757,0,0,0,0,0,0,1.12950368523413,0.460325236507177,0.572895513439397,0,0,0.755393897389701,0,0.45032120322422,0.453142408984205,0,0,0,0,0.243106717068294,0,0,0.222246727801615,0,0,0.505394423527595,0.50695859978048,0,0.0936415074698824,0.0640251524048693,0,0,0,0.38581844092741,0,0,0,0.354951612318675,0.238436189947321,0.290692833264657,0.282328141245992,0.423073039458382,0,0.263069711437843,0.407412341537585,0,0,0.29551344712669,0,0.154936841185966,0,0,0,0,0,0,0 | |phase1_expression=0.480446541314382,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0.183546752161682,0,5.23260375313072,0.219686182734472,2.72201858703997,1.95980990275508,0,0,0,0,0,0,0,0.404632921719196,0,2.53532561402472,0,0,0,0,0,0.299600110518405,0,0,0.405017814995072,0,0.285650984403804,0.220868540951614,0,3.54628242767475,2.75765635983006,1.10115880999389,0.766124028511126,0.307213066512487,0,3.93396867490361,0,0.558365998002762,0,0.763991238884051,0.589257170947335,0.427115042397309,0.186399445825301,0,0.302286240427142,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0.173485326766136,0.608930956624282,0.230615497256059,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0.11981512450592,0,0,0.149790639404823,0,0.251308704225729,0.521472960576829,0,0.41557608911912,0.162241263067758,0,0.124406970610093,0.252722758433675,0.210441855886474,0.260240885925407,0.229902104433473,0,0.452114453507145,0,0.512454881139399,0,0,0,0,0,0.219195732427575,0.278047249225598,0,0,0.199034266818493,0.702213187313235,0.257347907114715,0,0,0,0.180062061461015,0,0.196764231747404,0.154267112887378,0.465067889500816,0,0,0.16455984991348,0.164167464079095,0,0,0,0,0.210289948564127,0.102904612379284,0,0,0,0.232236671860439,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0.456994050438915,0,0.407302655690628,0,0.0701358198903186,0.0632365371242573,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0.169745085775188,0,0,0,0,0,0.44292937929755,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0.315508219416257,0,0.215423397732799,0,0,0,0,0,0,0,0,0.35613120733451,0,0,0,0,0.302323556964751,0,0,0,0,0.363533729477506,0,0,0,0,0,0.36012218806262,0.258717367565509,0.214337035031592,0,0.356737635204141,0,0.304464949114599,0,0,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0.169978429993855,0,0,0.954670618015114,0,0,0,0.418176592028937,0,0,0.0826534557253359,0,0,0,0,0,0,0,0.129159823477731,0.337912250981556,0.117357238645754,0,0,0,0,0,0,0.205421914329655,0.129920822977795,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0.0897138566094757,0,0,0,0,0,0,1.12950368523413,0.460325236507177,0.572895513439397,0,0,0.755393897389701,0,0.45032120322422,0.453142408984205,0,0,0,0,0.243106717068294,0,0,0.222246727801615,0,0,0.505394423527595,0.50695859978048,0,0.0936415074698824,0.0640251524048693,0,0,0,0.38581844092741,0,0,0,0.354951612318675,0.238436189947321,0.290692833264657,0.282328141245992,0.423073039458382,0,0.263069711437843,0.407412341537585,0,0,0.29551344712669,0,0.154936841185966,0,0,0,0,0,0,0 | ||
|short_description=p@chr17:56552184..56552196,- | |||
}} | }} |
Latest revision as of 03:24, 5 August 2015
Short description: | p@chr17:56552184..56552196, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:56552184..56552196, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 2.24e-15 | 6 |
macroglial cell | 2.24e-15 | 6 |
astrocyte | 2.24e-15 | 6 |
neural cell | 2.39e-14 | 43 |
hippocampal neuron | 3.65e-14 | 3 |
ectodermal cell | 5.11e-14 | 44 |
neurectodermal cell | 5.11e-14 | 44 |
oligodendrocyte precursor cell | 1.05e-11 | 8 |
CNS neuron (sensu Vertebrata) | 8.65e-11 | 23 |
neuroblast (sensu Vertebrata) | 8.65e-11 | 23 |
migratory neural crest cell | 1.73e-09 | 10 |
neuron associated cell | 1.73e-09 | 10 |
glial cell (sensu Vertebrata) | 1.73e-09 | 10 |
neuron associated cell (sensu Vertebrata) | 1.73e-09 | 10 |
glial cell | 1.73e-09 | 10 |
glioblast | 1.73e-09 | 10 |
glioblast (sensu Vertebrata) | 1.73e-09 | 10 |
embryonic cell | 1.04e-08 | 70 |
neuron | 1.50e-07 | 33 |
neuronal stem cell | 1.50e-07 | 33 |
neuroblast | 1.50e-07 | 33 |
electrically signaling cell | 1.50e-07 | 33 |
neuron of cerebral cortex | 1.51e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
Ammon's horn | 2.54e-13 | 7 |
lobe parts of cerebral cortex | 2.54e-13 | 7 |
hippocampal formation | 2.54e-13 | 7 |
limbic system | 2.54e-13 | 7 |
limbic lobe | 2.54e-13 | 7 |
central nervous system | 1.45e-10 | 73 |
nervous system | 2.82e-10 | 75 |
regional part of cerebral cortex | 1.45e-09 | 17 |
regional part of nervous system | 9.88e-09 | 54 |
brain grey matter | 1.29e-08 | 29 |
regional part of telencephalon | 1.29e-08 | 29 |
telencephalon | 1.29e-08 | 29 |
ectoderm-derived structure | 4.90e-08 | 95 |
ectoderm | 4.90e-08 | 95 |
presumptive ectoderm | 4.90e-08 | 95 |
cerebral cortex | 8.32e-08 | 21 |
cerebral hemisphere | 8.32e-08 | 21 |
pallium | 8.32e-08 | 21 |
regional part of brain | 1.09e-07 | 46 |
brain | 1.60e-07 | 47 |
future brain | 1.60e-07 | 47 |
gray matter | 2.33e-07 | 34 |
neural tube | 8.74e-07 | 52 |
neural rod | 8.74e-07 | 52 |
future spinal cord | 8.74e-07 | 52 |
neural keel | 8.74e-07 | 52 |