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FFCP PHASE1:Mm9::chr12:70892216..70892280,-: Difference between revisions

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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2040|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:70892216..70892280,-|id=chr12:70892216..70892280,-|ontology_enrichment_celltype=CL:0000117!4.87e-08!23;CL:0000337!4.87e-08!23|ontology_enrichment_celltype_v019_2=CL:0000117,2.05e-08,23;CL:0000337,2.05e-08,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.58e-12!52;UBERON:0005068!2.58e-12!52;UBERON:0006241!2.58e-12!52;UBERON:0007135!2.58e-12!52;UBERON:0002020!5.40e-12!34;UBERON:0000955!1.20e-11!50;UBERON:0006238!1.20e-11!50;UBERON:0002616!3.18e-11!49;UBERON:0000489!2.43e-10!21;UBERON:0002791!9.96e-10!29;UBERON:0003528!9.96e-10!29;UBERON:0001893!9.96e-10!29;UBERON:0003080!4.19e-09!40;UBERON:0000033!4.21e-09!63;UBERON:0002780!1.41e-08!39;UBERON:0001890!1.41e-08!39;UBERON:0006240!1.41e-08!39;UBERON:0001017!3.75e-08!73;UBERON:0005743!3.75e-08!73;UBERON:0002021!6.28e-08!10;UBERON:0000411!6.28e-08!10;UBERON:0001950!6.28e-08!10;UBERON:0002346!1.25e-07!71;UBERON:0003075!1.25e-07!71;UBERON:0007284!1.25e-07!71;UBERON:0000073!1.46e-07!75;UBERON:0001016!1.46e-07!75;UBERON:0006554!2.69e-07!16;UBERON:0002113!3.70e-07!14;UBERON:0003918!3.70e-07!14;UBERON:0005095!3.70e-07!14;UBERON:0007687!3.70e-07!14;UBERON:0003056!4.06e-07!49;UBERON:0007811!5.14e-07!86;UBERON:0000468!7.23e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.99e-14,54;UBERON:0002020,2.45e-13,34;UBERON:0001049,1.21e-12,52;UBERON:0005068,1.21e-12,52;UBERON:0006241,1.21e-12,52;UBERON:0007135,1.21e-12,52;UBERON:0000489,4.06e-12,21;UBERON:0003528,1.19e-10,29;UBERON:0002791,1.19e-10,29;UBERON:0001893,1.19e-10,29;UBERON:0001017,3.71e-10,73;UBERON:0000955,4.52e-10,47;UBERON:0006238,4.52e-10,47;UBERON:0002616,1.30e-09,46;UBERON:0001016,2.02e-09,75;UBERON:0002021,3.21e-09,10;UBERON:0000411,3.21e-09,10;UBERON:0001950,3.21e-09,10;UBERON:0003080,1.95e-08,40;UBERON:0002346,2.14e-08,64;UBERON:0003075,2.14e-08,64;UBERON:0007284,2.14e-08,64;UBERON:0002113,2.70e-08,14;UBERON:0003918,2.70e-08,14;UBERON:0011143,2.70e-08,14;UBERON:0005095,2.70e-08,14;UBERON:0007687,2.70e-08,14;UBERON:0002780,7.32e-08,39;UBERON:0001890,7.32e-08,39;UBERON:0006240,7.32e-08,39;UBERON:0002619,1.19e-07,17;UBERON:0000956,5.92e-07,21;UBERON:0001869,5.92e-07,21;UBERON:0000203,5.92e-07,21|phase1_expression=1.44133962394315,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6648780945253,2.83465374345756,0.699561878128147,13.4071420277251,11.9289557236993,12.7316895539409,12.3312770719051,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0.588231488031014,0,0,0,0,0,0,0,0.219686182734472,0,0.279972843250725,0,8.05356509077134,0,0,0,0,0,3.84401275633236,7.93486468908049,6.97214543856797,0,0,0,0,0,0,0,0.622137673850866,2.29510095163874,0.841299845405528,10.8547374073445,15.9025349485162,1.71487118900936,1.34183659425531,1.83843757322004,30.8324466798288,23.7498448838449,25.6522910537927,3.69281605644543,4.94033275453012,5.2091337055676,16.4717969410815,14.069065250792,17.8773949898868,16.7938293719991,12.2439645487229,5.96478226640962,0.151452386666368,0.0755715601067855,0.869593466105033,0,0,0.539703191637817,0.649776417447669,0,5.47733238513832,0,0,0,1.69012103732017,0,0,0,0,0,0,6.8510327831436,11.9111426477699,0.445326417194474,0.346970653532272,0.608930956624282,0.922461989024234,0.753613202763113,0.470354828542819,0.502666365318702,0.247194967734374,0.289198713839823,1.76922110389975,0.485300549842228,0.662524555381181,2.42437626567611,0,21.6657789788545,18.2218634927706,0.510914110417183,0,0,0,30.5572904385838,13.2675174817402,7.16229807043327,23.6401075461496,20.4572365864264,23.8956251243494,18.0087802005211,2.54598409625791,2.11491850037158,1.0108910337347,0.210441855886474,0.130120442962704,0.229902104433473,0.180062129805349,0.30140963567143,0.612328492361951,1.0249097622788,0.562210347358373,2.84573707812917,0.215567992932842,0.189106080167819,0.527853372491847,0.657587197282725,0.278047249225598,0.348252166522167,0.411564272815887,1.39323986772945,0,0,0,0,0.469052119962192,0.900310307305074,0.946978942340841,0.787056926989615,1.3884040159864,0.930135779001631,1.60964040839772,0.700592054203017,0,0.492502392237286,0.324275238183423,0.146199987425332,0.219550115291051,0,15.1408762966172,4.93942139420565,0,0.793351699990633,0.853153002140936,0.464473343720877,1.03093969057675,1.00841762311671,0.667134131534611,1.33157938278791,0,0.823494773620054,0.754005626400808,0.994782360205754,0.58489226135736,0,0.864552199498777,0.597423819763102,5.69003702859245,8.11164439529075,16.9061603509621,25.8637186363549,34.5235427158374,27.7737846765661,59.9482371937959,60.2249403756777,65.1544720541705,51.2098230275472,0.296452627087149,0.166845105716094,0,0,0.202860121388503,0.241177159752417,0.25462585178142,0.287696137450811,0.486405680325106,0.549122826376163,0,0.372140947668503,0.624075346229121,0,0,0,2.21703828199926,0.37898282354097,0.651859905768103,0.848725428875941,1.17345124144251,1.17254380209271,1.42826184531608,0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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=NA
|HGNC=
|MCL_coexpression_id=2040
|TSSclassifier=NA
|UniProt=NA
|association_with_transcript=NA
|cluster_id=chr12:70892216..70892280,-
|description=CAGE_peak_at_chr12:70892216..70892280,-
|id=chr12:70892216..70892280,-
|ontology_enrichment_celltype=CL:0000117!4.87e-08!23;CL:0000337!4.87e-08!23
|ontology_enrichment_celltype_v019_2=CL:0000117,2.05e-08,23;CL:0000337,2.05e-08,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!2.58e-12!52;UBERON:0005068!2.58e-12!52;UBERON:0006241!2.58e-12!52;UBERON:0007135!2.58e-12!52;UBERON:0002020!5.40e-12!34;UBERON:0000955!1.20e-11!50;UBERON:0006238!1.20e-11!50;UBERON:0002616!3.18e-11!49;UBERON:0000489!2.43e-10!21;UBERON:0002791!9.96e-10!29;UBERON:0003528!9.96e-10!29;UBERON:0001893!9.96e-10!29;UBERON:0003080!4.19e-09!40;UBERON:0000033!4.21e-09!63;UBERON:0002780!1.41e-08!39;UBERON:0001890!1.41e-08!39;UBERON:0006240!1.41e-08!39;UBERON:0001017!3.75e-08!73;UBERON:0005743!3.75e-08!73;UBERON:0002021!6.28e-08!10;UBERON:0000411!6.28e-08!10;UBERON:0001950!6.28e-08!10;UBERON:0002346!1.25e-07!71;UBERON:0003075!1.25e-07!71;UBERON:0007284!1.25e-07!71;UBERON:0000073!1.46e-07!75;UBERON:0001016!1.46e-07!75;UBERON:0006554!2.69e-07!16;UBERON:0002113!3.70e-07!14;UBERON:0003918!3.70e-07!14;UBERON:0005095!3.70e-07!14;UBERON:0007687!3.70e-07!14;UBERON:0003056!4.06e-07!49;UBERON:0007811!5.14e-07!86;UBERON:0000468!7.23e-07!333
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.99e-14,54;UBERON:0002020,2.45e-13,34;UBERON:0001049,1.21e-12,52;UBERON:0005068,1.21e-12,52;UBERON:0006241,1.21e-12,52;UBERON:0007135,1.21e-12,52;UBERON:0000489,4.06e-12,21;UBERON:0003528,1.19e-10,29;UBERON:0002791,1.19e-10,29;UBERON:0001893,1.19e-10,29;UBERON:0001017,3.71e-10,73;UBERON:0000955,4.52e-10,47;UBERON:0006238,4.52e-10,47;UBERON:0002616,1.30e-09,46;UBERON:0001016,2.02e-09,75;UBERON:0002021,3.21e-09,10;UBERON:0000411,3.21e-09,10;UBERON:0001950,3.21e-09,10;UBERON:0003080,1.95e-08,40;UBERON:0002346,2.14e-08,64;UBERON:0003075,2.14e-08,64;UBERON:0007284,2.14e-08,64;UBERON:0002113,2.70e-08,14;UBERON:0003918,2.70e-08,14;UBERON:0011143,2.70e-08,14;UBERON:0005095,2.70e-08,14;UBERON:0007687,2.70e-08,14;UBERON:0002780,7.32e-08,39;UBERON:0001890,7.32e-08,39;UBERON:0006240,7.32e-08,39;UBERON:0002619,1.19e-07,17;UBERON:0000956,5.92e-07,21;UBERON:0001869,5.92e-07,21;UBERON:0000203,5.92e-07,21
|phase1_expression=1.44133962394315,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6648780945253,2.83465374345756,0.699561878128147,13.4071420277251,11.9289557236993,12.7316895539409,12.3312770719051,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0.588231488031014,0,0,0,0,0,0,0,0.219686182734472,0,0.279972843250725,0,8.05356509077134,0,0,0,0,0,3.84401275633236,7.93486468908049,6.97214543856797,0,0,0,0,0,0,0,0.622137673850866,2.29510095163874,0.841299845405528,10.8547374073445,15.9025349485162,1.71487118900936,1.34183659425531,1.83843757322004,30.8324466798288,23.7498448838449,25.6522910537927,3.69281605644543,4.94033275453012,5.2091337055676,16.4717969410815,14.069065250792,17.8773949898868,16.7938293719991,12.2439645487229,5.96478226640962,0.151452386666368,0.0755715601067855,0.869593466105033,0,0,0.539703191637817,0.649776417447669,0,5.47733238513832,0,0,0,1.69012103732017,0,0,0,0,0,0,6.8510327831436,11.9111426477699,0.445326417194474,0.346970653532272,0.608930956624282,0.922461989024234,0.753613202763113,0.470354828542819,0.502666365318702,0.247194967734374,0.289198713839823,1.76922110389975,0.485300549842228,0.662524555381181,2.42437626567611,0,21.6657789788545,18.2218634927706,0.510914110417183,0,0,0,30.5572904385838,13.2675174817402,7.16229807043327,23.6401075461496,20.4572365864264,23.8956251243494,18.0087802005211,2.54598409625791,2.11491850037158,1.0108910337347,0.210441855886474,0.130120442962704,0.229902104433473,0.180062129805349,0.30140963567143,0.612328492361951,1.0249097622788,0.562210347358373,2.84573707812917,0.215567992932842,0.189106080167819,0.527853372491847,0.657587197282725,0.278047249225598,0.348252166522167,0.411564272815887,1.39323986772945,0,0,0,0,0.469052119962192,0.900310307305074,0.946978942340841,0.787056926989615,1.3884040159864,0.930135779001631,1.60964040839772,0.700592054203017,0,0.492502392237286,0.324275238183423,0.146199987425332,0.219550115291051,0,15.1408762966172,4.93942139420565,0,0.793351699990633,0.853153002140936,0.464473343720877,1.03093969057675,1.00841762311671,0.667134131534611,1.33157938278791,0,0.823494773620054,0.754005626400808,0.994782360205754,0.58489226135736,0,0.864552199498777,0.597423819763102,5.69003702859245,8.11164439529075,16.9061603509621,25.8637186363549,34.5235427158374,27.7737846765661,59.9482371937959,60.2249403756777,65.1544720541705,51.2098230275472,0.296452627087149,0.166845105716094,0,0,0.202860121388503,0.241177159752417,0.25462585178142,0.287696137450811,0.486405680325106,0.549122826376163,0,0.372140947668503,0.624075346229121,0,0,0,2.21703828199926,0.37898282354097,0.651859905768103,0.848725428875941,1.17345124144251,1.17254380209271,1.42826184531608,0.390267295715598,0.945810864637146,1.55025282754142,0.797273843287435,1.80249646187312,1.20879487306127,1.73578870297814,0,0,0,0.551873492609465,24.2431390881566,18.0505997351993,0,0.252470927204373,0,0,0,0,0,0.283076530788832,0,0,0,8.35435422696698,4.9679029822894,3.91744328067962,7.00413925220377,7.58862565673663,1.32745138339963,2.42780636154981,3.32555912661226,7.73280826999182,5.61073596473468,7.37844355065426,2.32585463851399,4.36240475373007,0.712994756769443,1.8962205476149,1.05418608574999,3.09406629744561,0.680879211507576,0,0.258717367565509,0.857348140126369,0.532020700926821,0.713475270408282,2.13913726782757,0.608929898229199,0,0,0.882113592219848,0.16488625294148,0,0.301564624640779,0.596861720015682,0.328281799490123,0.582961673259701,21.8801856372401,1.87957968877638,0.82554747185289,0.185194527369712,1.31857919903284,5.46776910884101,3.20289442489132,0,0,0,2.86401185404534,0.316335993581135,1.82987520414164,0.756037385752609,1.25452977608681,0.436725127492355,1.75323650300267,0.991841468704031,4.4498510137285,1.29614973291793,1.24267862617385,1.12738587736838,0.149516546043979,0.330916980914195,0.194451188344048,0.387479470433193,0.168956125490778,0.234714477291508,0.2604087696879,0,0.483168241652012,0.288030006257865,3.47612232690996,0.405450430580328,0.205421914329655,0.389762468933385,0.716106782669926,3.9736270956253,3.24527713703916,3.69223817936443,5.45218829719997,6.09654453239999,6.45287584875779,4.48306251402861,3.75226182397285,9.46702907670709,0,0,0,0,7.34120457322324,0.563047426353546,26.3738338944862,0.214368379079066,2.50786052017682,34.4498623996411,34.5243927380383,30.9363577257274,22.3409137046794,32.1988784292202,30.9711497929777,31.0510350106631,34.674732648265,36.2513927187364,29.5123377698537,0.415149390336707,0,0.512200817262403,1.45864030240976,1.46729213839588,0.735374033800057,2.66696073361938,1.85431551515005,4.49286893428541,1.76888048234658,4.30914809813408,3.9611531691076,2.90288673156635,2.43295579138503,2.12511235135769,1.90517476513229,2.0859178670074,1.92909220463705,4.94503080963968,1.61918812147837,3.08582327146874,2.66213709239006,2.86123427936785,3.77900683244054,3.01150017329058,2.28459441307527,2.0122077016005,3.6829759601298,3.25929873230068,2.80571135828869,2.72860541685601,2.06859412988683,2.45538625901814,3.71848418846318,3.66522560864169,5.24602213669686,3.74290573512653,2.36358159453128,0.191288332068843,2.20591419119516,2.08681052058379
|short_description=p@chr12:70892216..70892280,-
}}

Latest revision as of 04:23, 5 August 2015

Short description:p@chr12:70892216..70892280, -
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr12:70892216..70892280, -
Coexpression cluster:MCL_coexpression_mm9:2040
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p@chr12:70892216..70892280-

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.83
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A213.41
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A411.93
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A612.73
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A312.33
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A28.05
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C33.84
Mouse Granule cells, donor2.CNhs12357.11731-123E37.93
Mouse Granule cells, donor3.CNhs12108.11636-122C76.97
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.62
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.30
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F110.85
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D515.90
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.71
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.34
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D330.83
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F323.75
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D725.65
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.69
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.94
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.21
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E416.47
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E514.07
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I617.88
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D616.79
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F612.24
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.96
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A75.48
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.69
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B66.85
accessory axillary lymph node, adult.CNhs10475.1063-29H911.91
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C32.42
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B221.67
cerebellum, neonate N30.CNhs11135.1395-42I218.22
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A430.56
corpus striatum, adult.CNhs10487.19-21D813.27
corpus striatum, neonate N00.CNhs11226.630-43F17.16
cortex, adult.CNhs10473.12-14D523.64
cortex, neonate N30.CNhs11107.1392-42F220.46
diencephalon, adult.CNhs10482.20-12F223.90
diencephalon, neonate N30.CNhs11201.1388-42B218.01
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.55
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.11
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.61
eyeball, neonate N01.CNhs11140.1532-43E71.02
eyeball, neonate N02.CNhs11205.1551-44G80.56
eyeball, neonate N16.CNhs11188.777-19A22.85
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I61.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.90
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C61.39
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G31.61
heart, neonate N00.CNhs11213.639-21E30.70
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E815.14
hippocampus, neonate N00.CNhs11228.627-43G14.94
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D81.03
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F71.33
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.86
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I95.69
kidney, embryo E15.CNhs10997.434-16F88.11
kidney, embryo E16.CNhs10584.464-22A516.91
kidney, embryo E17.CNhs11028.483-18I225.86
kidney, embryo E18.CNhs11001.1288-20C734.52
kidney, neonate N00.CNhs11214.646-21G727.77
kidney, neonate N10.CNhs11206.758-6D559.95
kidney, neonate N20.CNhs11113.832-19I160.22
kidney, neonate N25.CNhs11122.1353-25F365.15
kidney, neonate N30.CNhs11203.1385-42H151.21
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B12.22
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.85
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A61.17
lung, embryo E18.CNhs10583.1287-20I61.43
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.95
lung, neonate N07.CNhs11111.715-19A31.55
lung, neonate N10.CNhs11219.750-23E60.80
lung, neonate N20.CNhs11109.822-18A41.80
lung, neonate N25.CNhs11119.1359-25C71.21
lung, neonate N30.CNhs11133.1394-42H21.74
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C224.24
medulla oblongata, neonate N30.CNhs11200.1396-42A318.05
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I98.35
ovary, adult.CNhs10507.91-2I74.97
ovary, embryo E18.CNhs11040.505-44H73.92
ovary, neonate N00.CNhs11217.1299-22I47.00
oviduct, adult pregnant day01.CNhs10500.988-6G67.59
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F42.43
pancreas, embryo E15.CNhs11042.1556-45F23.33
pancreas, embryo E16.CNhs11003.460-26E57.73
pancreas, embryo E17.CNhs10599.1558-45G35.61
pancreas, embryo E18.CNhs10580.1535-43I77.38
pancreas, neonate N00.CNhs11105.645-26G92.33
pancreas, neonate N01.CNhs11138.1531-43D74.36
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B61.90
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F52.14
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.30
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C921.88
spleen, adult.CNhs10465.25-2G21.88
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D11.32
spleen, neonate N20.CNhs11112.824-19H15.47
spleen, neonate N25.CNhs11099.1354-25G33.20
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G81.83
stomach, embryo E16.CNhs11022.459-17D40.76
stomach, embryo E17.CNhs11006.1035-18D51.25
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B81.75
stomach, neonate N07.CNhs11210.718-18A90.99
stomach, neonate N25.CNhs11104.1355-25E44.45
stomach, neonate N30.CNhs11134.1386-42I11.30
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B53.48
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G43.97
thymus, neonate N02.CNhs11181.1541-43F83.25
thymus, neonate N03.CNhs11137.2104-43C73.69
thymus, neonate N06.CNhs11197.681-26C45.45
thymus, neonate N07.CNhs11211.713-19D36.10
thymus, neonate N10.CNhs11194.748-24E46.45
thymus, neonate N20.CNhs11186.820-7A24.48
thymus, neonate N25.CNhs11125.1362-25G73.75
thymus, neonate N30.CNhs11132.1393-42G29.47
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E47.34
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E526.37
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F82.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A134.45
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A234.52
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A330.94
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D722.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A432.20
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A530.97
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A631.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A734.67
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A836.25
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A929.51
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B11.47
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.31
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.96
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.90
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.43
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.13
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.09
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.95
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.66
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.78
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.01
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.01
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.26
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.73
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.72
whole body, embryo E17.5.CNhs10513.490-9F93.67
whole body, embryo E17.CNhs10517.475-3I55.25
whole body, embryo E18.CNhs10516.493-3B33.74
whole body, neonate N00.CNhs10525.657-19C22.36
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D12.21
whole body, neonate N10.CNhs10518.761-6B42.09





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.05e-0823
neuroblast (sensu Vertebrata)2.05e-0823

Uber anatomy
Ontology termp-valuen
regional part of nervous system5.99e-1454
gray matter2.45e-1334
neural tube1.21e-1252
neural rod1.21e-1252
future spinal cord1.21e-1252
neural keel1.21e-1252
cavitated compound organ4.06e-1221
brain grey matter1.19e-1029
regional part of telencephalon1.19e-1029
telencephalon1.19e-1029
central nervous system3.71e-1073
brain4.52e-1047
future brain4.52e-1047
regional part of brain1.30e-0946
nervous system2.02e-0975
occipital lobe3.21e-0910
visual cortex3.21e-0910
neocortex3.21e-0910
anterior neural tube1.95e-0840
neurectoderm2.14e-0864
neural plate2.14e-0864
presumptive neural plate2.14e-0864
kidney2.70e-0814
kidney mesenchyme2.70e-0814
upper urinary tract2.70e-0814
kidney rudiment2.70e-0814
kidney field2.70e-0814
regional part of forebrain7.32e-0839
forebrain7.32e-0839
future forebrain7.32e-0839
regional part of cerebral cortex1.19e-0717
cerebral cortex5.92e-0721
cerebral hemisphere5.92e-0721
pallium5.92e-0721
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