FFCP PHASE1:Mm9::chr1:170361398..170361400,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=392 | |MCL_coexpression_id=392 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:170361398..170361400,- | |||
|description=CAGE_peak_at_chr1:170361398..170361400,- | |description=CAGE_peak_at_chr1:170361398..170361400,- | ||
|id=chr1:170361398..170361400,- | |id=chr1:170361398..170361400,- | ||
|ontology_enrichment_celltype=CL:0000055!1.12e-26!50;CL:0000221!5.41e-26!44;CL:0000133!5.41e-26!44;CL:0002319!2.54e-25!43;CL:0000393!1.94e-23!39;CL:0000211!1.94e-23!39;CL:0000540!2.19e-21!33;CL:0000047!2.19e-21!33;CL:0000031!2.19e-21!33;CL:0000404!2.19e-21!33;CL:0000117!6.31e-21!23;CL:0000337!6.31e-21!23;CL:0002321!7.83e-20!70;CL:0000220!7.83e-20!70;CL:0002609!1.69e-07!6;CL:0000548!1.81e-07!115;CL:0000004!1.81e-07!115;CL:0000255!1.81e-07!115;CL:0000723!4.28e-07!91;CL:0000048!4.28e-07!91;CL:0002371!6.66e-07!118 | |ontology_enrichment_celltype=CL:0000055!1.12e-26!50;CL:0000221!5.41e-26!44;CL:0000133!5.41e-26!44;CL:0002319!2.54e-25!43;CL:0000393!1.94e-23!39;CL:0000211!1.94e-23!39;CL:0000540!2.19e-21!33;CL:0000047!2.19e-21!33;CL:0000031!2.19e-21!33;CL:0000404!2.19e-21!33;CL:0000117!6.31e-21!23;CL:0000337!6.31e-21!23;CL:0002321!7.83e-20!70;CL:0000220!7.83e-20!70;CL:0002609!1.69e-07!6;CL:0000548!1.81e-07!115;CL:0000004!1.81e-07!115;CL:0000255!1.81e-07!115;CL:0000723!4.28e-07!91;CL:0000048!4.28e-07!91;CL:0002371!6.66e-07!118 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.94e-39,23;CL:0000337,6.94e-39,23;CL:0000393,2.92e-37,39;CL:0000211,2.92e-37,39;CL:0000540,8.41e-37,33;CL:0000047,8.41e-37,33;CL:0000031,8.41e-37,33;CL:0000404,8.41e-37,33;CL:0002319,1.67e-36,43;CL:0000221,1.42e-35,44;CL:0000133,1.42e-35,44;CL:0002321,3.13e-27,70;CL:0002609,6.16e-21,6;CL:0000723,5.92e-15,91;CL:0000048,5.92e-15,91;CL:0000034,9.45e-14,97;CL:0002608,2.85e-11,3;CL:0000120,1.03e-10,3;CL:0002613,3.90e-10,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.91e-12!75;UBERON:0001016!5.91e-12!75;UBERON:0001017!3.23e-11!73;UBERON:0005743!3.23e-11!73;UBERON:0004121!4.65e-10!102;UBERON:0000924!4.65e-10!102;UBERON:0006601!4.65e-10!102 | |ontology_enrichment_uberon=UBERON:0000073!5.91e-12!75;UBERON:0001016!5.91e-12!75;UBERON:0001017!3.23e-11!73;UBERON:0005743!3.23e-11!73;UBERON:0004121!4.65e-10!102;UBERON:0000924!4.65e-10!102;UBERON:0006601!4.65e-10!102 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.06e-19,73;UBERON:0001016,4.65e-19,75;UBERON:0003528,1.40e-14,29;UBERON:0002791,1.40e-14,29;UBERON:0001893,1.40e-14,29;UBERON:0002020,2.88e-14,34;UBERON:0004121,4.19e-14,95;UBERON:0000924,4.19e-14,95;UBERON:0006601,4.19e-14,95;UBERON:0000073,1.84e-12,54;UBERON:0002780,3.13e-10,39;UBERON:0001890,3.13e-10,39;UBERON:0006240,3.13e-10,39;UBERON:0002420,3.84e-10,8;UBERON:0007245,3.84e-10,8;UBERON:0010009,3.84e-10,8;UBERON:0010011,3.84e-10,8;UBERON:0000454,3.84e-10,8;UBERON:0003080,6.46e-10,40;UBERON:0001049,7.84e-10,52;UBERON:0005068,7.84e-10,52;UBERON:0006241,7.84e-10,52;UBERON:0007135,7.84e-10,52;UBERON:0002616,8.57e-10,46;UBERON:0000955,1.57e-09,47;UBERON:0006238,1.57e-09,47;UBERON:0002346,9.10e-09,64;UBERON:0003075,9.10e-09,64;UBERON:0007284,9.10e-09,64;UBERON:0001954,5.69e-08,7;UBERON:0003022,5.69e-08,7;UBERON:0002421,5.69e-08,7;UBERON:0000349,5.69e-08,7;UBERON:0002600,5.69e-08,7;UBERON:0003056,1.15e-07,49;UBERON:0010371,2.59e-07,73;UBERON:0000956,3.24e-07,21;UBERON:0001869,3.24e-07,21;UBERON:0000203,3.24e-07,21;UBERON:0010314,5.18e-07,92 | |||
|phase1_expression=0,0,0,0.30246421130683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577703239502549,0,0,0,0,0,0,0,0,0,0.101376931219515,0.367093504323363,0.782391344348039,1.09012578190223,0,1.1665793944457,1.25987779462826,0,0,0,0,0.257259436035947,1.43266719969378,1.54701627683233,2.42779753031517,1.5869729378161,5.07065122804943,0.338844532069132,0.889294796111139,0,0,0,0.898800331555214,0.768436610643109,2.90330914463737,5.26523159493594,3.57552434297349,0.571301968807607,0.441737081903227,2.32732518508413,5.65488279007595,11.0306254393203,1.10115880999389,0.766124028511126,1.22885226604995,1.05509030184155,2.56165402086747,2.08365348222704,0.279182999001381,2.8138130501584,2.75036845998258,0.883885756421003,1.70846016958924,0.186399445825301,0.151452386666368,0.302286240427142,0,0,0,1.07940638327563,0,0,0,0,0,0.35333957451034,0.422530259330042,0,0,0,0,0,0.505524445014783,0,0,0.148442139064825,0,0,0,0.150722640552623,0,0.125666591329675,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,0,0,0,0,0,0.162241263067758,0,0,0,0.210441855886474,0.130120442962704,0,0,0.150704817835715,0,0.12811372028485,0,0,0.215567992932842,0,0.175951124163949,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0.154267112887378,0.232533944750408,0,0.116765342367169,0,0,0.0810688095458557,0,0,0.134206418760372,0,0,0,0.528901133327089,0,0,0,0,0,0,0,0,0,0,0,0.898819408654221,0,0,0,0,0,0.407302655690628,0.387904974335251,0.0701358198903186,0.126473074248515,0.147610147979602,0,0,0,0,0.196558995113203,0,0.202860121388503,0,0,0,0,0.274561413188081,0,0.372140947668503,0,0,0,0,0,0,0.162964976442026,0,0.234690248288502,0.670025029767263,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0,0.491804836130026,0,0.631016438832513,2.73307121007647,0,0.716906393857656,0.668396022247182,0,0,2.04579100537918,1.97643888973262,0.321321316421807,0.141940085208269,0.534196811001766,0,0,0,0,0,0,0,0,0,0,1.06949213515416,0,1.05418608574999,0,0,0,0,0,0,0,0.164549020602121,0,0.23467170806371,0,0,0,0,0,0.119372344003136,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0.209088296014469,0,0,0.0826534557253359,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0.375364950902364,0.36630324853453,0,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0.103787347584177,0,0.170733605754134,0,0,0.183843508450014,0,0.412070114477788,0,0,0,0.377252682772152,0,0,0.114870937911227,0.476293691283074,0.347652977834566,0.192909220463705,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0.290692833264657,0.0941093804153306,0.25384382367503,0,0,0,0.561142271657738,0,0.0985044823755635,0,0,0.192906610981141,0,0,0,0,0,0 | |phase1_expression=0,0,0,0.30246421130683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577703239502549,0,0,0,0,0,0,0,0,0,0.101376931219515,0.367093504323363,0.782391344348039,1.09012578190223,0,1.1665793944457,1.25987779462826,0,0,0,0,0.257259436035947,1.43266719969378,1.54701627683233,2.42779753031517,1.5869729378161,5.07065122804943,0.338844532069132,0.889294796111139,0,0,0,0.898800331555214,0.768436610643109,2.90330914463737,5.26523159493594,3.57552434297349,0.571301968807607,0.441737081903227,2.32732518508413,5.65488279007595,11.0306254393203,1.10115880999389,0.766124028511126,1.22885226604995,1.05509030184155,2.56165402086747,2.08365348222704,0.279182999001381,2.8138130501584,2.75036845998258,0.883885756421003,1.70846016958924,0.186399445825301,0.151452386666368,0.302286240427142,0,0,0,1.07940638327563,0,0,0,0,0,0.35333957451034,0.422530259330042,0,0,0,0,0,0.505524445014783,0,0,0.148442139064825,0,0,0,0.150722640552623,0,0.125666591329675,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,0,0,0,0,0,0.162241263067758,0,0,0,0.210441855886474,0.130120442962704,0,0,0.150704817835715,0,0.12811372028485,0,0,0.215567992932842,0,0.175951124163949,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0.154267112887378,0.232533944750408,0,0.116765342367169,0,0,0.0810688095458557,0,0,0.134206418760372,0,0,0,0.528901133327089,0,0,0,0,0,0,0,0,0,0,0,0.898819408654221,0,0,0,0,0,0.407302655690628,0.387904974335251,0.0701358198903186,0.126473074248515,0.147610147979602,0,0,0,0,0.196558995113203,0,0.202860121388503,0,0,0,0,0.274561413188081,0,0.372140947668503,0,0,0,0,0,0,0.162964976442026,0,0.234690248288502,0.670025029767263,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0,0.491804836130026,0,0.631016438832513,2.73307121007647,0,0.716906393857656,0.668396022247182,0,0,2.04579100537918,1.97643888973262,0.321321316421807,0.141940085208269,0.534196811001766,0,0,0,0,0,0,0,0,0,0,1.06949213515416,0,1.05418608574999,0,0,0,0,0,0,0,0.164549020602121,0,0.23467170806371,0,0,0,0,0,0.119372344003136,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0.209088296014469,0,0,0.0826534557253359,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0.375364950902364,0.36630324853453,0,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0.103787347584177,0,0.170733605754134,0,0,0.183843508450014,0,0.412070114477788,0,0,0,0.377252682772152,0,0,0.114870937911227,0.476293691283074,0.347652977834566,0.192909220463705,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0.290692833264657,0.0941093804153306,0.25384382367503,0,0,0,0.561142271657738,0,0.0985044823755635,0,0,0.192906610981141,0,0,0,0,0,0 | ||
|short_description=p@chr1:170361398..170361400,- | |short_description=p@chr1:170361398..170361400,- | ||
}} | }} |
Latest revision as of 05:00, 5 August 2015
Short description: | p@chr1:170361398..170361400, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:170361398..170361400, - |
Coexpression cluster: | MCL_coexpression_mm9:392 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.94e-39 | 23 |
neuroblast (sensu Vertebrata) | 6.94e-39 | 23 |
electrically responsive cell | 2.92e-37 | 39 |
electrically active cell | 2.92e-37 | 39 |
neuron | 8.41e-37 | 33 |
neuronal stem cell | 8.41e-37 | 33 |
neuroblast | 8.41e-37 | 33 |
electrically signaling cell | 8.41e-37 | 33 |
neural cell | 1.67e-36 | 43 |
ectodermal cell | 1.42e-35 | 44 |
neurectodermal cell | 1.42e-35 | 44 |
embryonic cell | 3.13e-27 | 70 |
neuron of cerebral cortex | 6.16e-21 | 6 |
somatic stem cell | 5.92e-15 | 91 |
multi fate stem cell | 5.92e-15 | 91 |
stem cell | 9.45e-14 | 97 |
hippocampal neuron | 2.85e-11 | 3 |
granule cell | 1.03e-10 | 3 |
striatum neuron | 3.90e-10 | 3 |