FFCP PHASE1:Mm9::chr9:50412012..50412057,+: Difference between revisions
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{{FFCP|EntrezGene=30057|HGNC=|MCL_coexpression_id=3070|UniProt=P62077|association_with_transcript=6bp_to_ENSMUST00000044051,NM_013897,uc009pjw.2,uc009pjx.2_5end|description=CAGE_peak_1_at_Timm8b_5end|id=chr9:50412012..50412057,+|ontology_enrichment_celltype=CL:0000117!5.66e-09!23;CL:0000337!5.66e-09!23;CL:0000221!9.74e-07!44;CL:0000133!9.74e-07!44|ontology_enrichment_celltype_v019_2=CL:0000117,5.66e-09,23;CL:0000337,5.66e-09,23;CL:0000221,9.74e-07,44;CL:0000133,9.74e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!9.30e-17!52;UBERON:0005068!9.30e-17!52;UBERON:0006241!9.30e-17!52;UBERON:0007135!9.30e-17!52;UBERON:0000955!7.42e-16!50;UBERON:0006238!7.42e-16!50;UBERON:0002616!1.20e-15!49;UBERON:0001017!1.50e-15!73;UBERON:0005743!1.50e-15!73;UBERON:0000073!1.92e-15!75;UBERON:0001016!1.92e-15!75;UBERON:0002020!7.26e-15!34;UBERON:0000033!2.43e-14!63;UBERON:0002346!6.84e-14!71;UBERON:0003075!6.84e-14!71;UBERON:0007284!6.84e-14!71;UBERON:0002791!3.35e-13!29;UBERON:0003528!3.35e-13!29;UBERON:0001893!3.35e-13!29;UBERON:0003080!1.62e-12!40;UBERON:0002780!4.27e-12!39;UBERON:0001890!4.27e-12!39;UBERON:0006240!4.27e-12!39;UBERON:0000025!1.71e-11!114;UBERON:0004111!3.82e-11!122;UBERON:0003056!6.15e-11!49;UBERON:0004121!8.37e-11!102;UBERON:0000924!8.37e-11!102;UBERON:0006601!8.37e-11!102;UBERON:0000956!1.16e-09!21;UBERON:0001869!1.16e-09!21;UBERON:0000203!1.16e-09!21;UBERON:0002619!1.27e-08!17;UBERON:0002021!1.76e-07!10;UBERON:0000411!1.76e-07!10;UBERON:0001950!1.76e-07!10;UBERON:0003103!2.26e-07!43|ontology_enrichment_uberon_v019_2=UBERON:0010314,3.14e-19,92;UBERON:0000073,1.83e-17,54;UBERON:0001049,9.30e-17,52;UBERON:0005068,9.30e-17,52;UBERON:0006241,9.30e-17,52;UBERON:0007135,9.30e-17,52;UBERON:0001017,1.50e-15,73;UBERON:0001016,1.92e-15,75;UBERON:0002020,7.26e-15,34;UBERON:0000955,1.12e-14,47;UBERON:0006238,1.12e-14,47;UBERON:0002616,1.79e-14,46;UBERON:0002346,2.20e-14,64;UBERON:0003075,2.20e-14,64;UBERON:0007284,2.20e-14,64;UBERON:0003528,3.35e-13,29;UBERON:0002791,3.35e-13,29;UBERON:0001893,3.35e-13,29;UBERON:0003080,1.62e-12,40;UBERON:0002780,4.27e-12,39;UBERON:0001890,4.27e-12,39;UBERON:0006240,4.27e-12,39;UBERON:0000025,1.71e-11,114;UBERON:0004111,3.82e-11,122;UBERON:0003056,6.15e-11,49;UBERON:0004121,7.67e-11,95;UBERON:0000924,7.67e-11,95;UBERON:0006601,7.67e-11,95;UBERON:0010371,2.20e-10,73;UBERON:0000956,1.16e-09,21;UBERON:0001869,1.16e-09,21;UBERON:0000203,1.16e-09,21;UBERON:0002619,1.27e-08,17;UBERON:0002021,1.76e-07,10;UBERON:0000411,1.76e-07,10;UBERON:0001950,1.76e-07,10;UBERON:0003103,2.26e-07,43|phase1_expression=110.182406808098,139.590163055744,111.019814411047,80.7579444189236,91.6639185801815,80.4141712457952,98.1173090501208,51.3910827297474,72.3654031859567,70.45342242292,133.036361311217,122.849124852818,46.566598541288,47.2070173062586,80.6125623593904,92.7336724645403,84.6469872535057,66.0893236425508,58.273634282439,72.1462408056651,166.854935276399,110.907992491389,143.659884026414,115.834514102426,130.992699489354,192.367707978532,175.750894432902,154.061931370411,170.451007252367,158.274921489237,200.887842653706,60.9629446521246,41.8244055557508,31.6963362030877,115.251796280759,132.655246996077,119.030734700961,89.9843006084352,145.328374081427,132.975030969345,122.352149510451,119.532959867728,124.290650375975,92.911851665976,79.783644869758,103.887461723512,184.644357266137,158.068238375824,161.029971944368,133.767770563107,117.72858058693,126.502256641175,42.2812167265496,23.211588544363,18.1490651536931,90.5553214846533,78.7966959831581,101.587402178656,165.090232061432,155.523347905978,160.359345087063,188.058715298368,130.726335028337,108.437915932409,95.9200371689965,93.0728950579391,109.354040339218,111.423308543251,127.123464690194,143.646318384919,145.544873255156,188.815300690914,218.659855542097,157.400676991216,135.621341490804,131.448286485233,146.454121729187,165.865852172659,169.120793115124,167.363699129616,146.014279189446,178.673286100969,262.152836062297,248.741073634003,194.817765915433,124.922520240835,136.392070205541,153.033945022572,124.645314226421,97.260597857433,59.4222201838439,195.316220074775,167.952919425814,152.196300041864,133.204165576772,112.006721774334,168.39285973797,64.4226619345058,92.4838176386213,83.03480000993,124.787269922139,48.7640614174408,33.1246811618639,14.2213340630666,150.894255584816,150.242400226733,144.074466829213,141.131275332758,34.1798006414267,88.0261884654411,109.642726516198,137.618396197088,123.148675534735,163.534064999595,76.5502483453438,100.156273289751,79.349584642734,107.292722834574,81.3841707793884,91.5600370702336,91.2075471241425,100.369177398991,117.426809567417,130.58023546715,110.587861197504,109.846533739694,71.2899990810226,119.980546198682,78.2752598770079,168.065097412211,197.182759814828,127.66482174667,202.505333024002,190.508015711096,174.126381340911,207.831057989798,58.1502767585306,98.1570998113634,231.999492242113,85.8602772016814,121.2722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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:30057 | |||
|HGNC= | |||
|MCL_coexpression_id=3070 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P62077 | |||
|association_with_transcript=6bp_to_ENSMUST00000044051,NM_013897,uc009pjw.2,uc009pjx.2_5end | |||
|cluster_id=chr9:50412012..50412057,+ | |||
|description=CAGE_peak_1_at_Timm8b_5end | |||
|id=chr9:50412012..50412057,+ | |||
|ontology_enrichment_celltype=CL:0000117!5.66e-09!23;CL:0000337!5.66e-09!23;CL:0000221!9.74e-07!44;CL:0000133!9.74e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.66e-09,23;CL:0000337,5.66e-09,23;CL:0000221,9.74e-07,44;CL:0000133,9.74e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!9.30e-17!52;UBERON:0005068!9.30e-17!52;UBERON:0006241!9.30e-17!52;UBERON:0007135!9.30e-17!52;UBERON:0000955!7.42e-16!50;UBERON:0006238!7.42e-16!50;UBERON:0002616!1.20e-15!49;UBERON:0001017!1.50e-15!73;UBERON:0005743!1.50e-15!73;UBERON:0000073!1.92e-15!75;UBERON:0001016!1.92e-15!75;UBERON:0002020!7.26e-15!34;UBERON:0000033!2.43e-14!63;UBERON:0002346!6.84e-14!71;UBERON:0003075!6.84e-14!71;UBERON:0007284!6.84e-14!71;UBERON:0002791!3.35e-13!29;UBERON:0003528!3.35e-13!29;UBERON:0001893!3.35e-13!29;UBERON:0003080!1.62e-12!40;UBERON:0002780!4.27e-12!39;UBERON:0001890!4.27e-12!39;UBERON:0006240!4.27e-12!39;UBERON:0000025!1.71e-11!114;UBERON:0004111!3.82e-11!122;UBERON:0003056!6.15e-11!49;UBERON:0004121!8.37e-11!102;UBERON:0000924!8.37e-11!102;UBERON:0006601!8.37e-11!102;UBERON:0000956!1.16e-09!21;UBERON:0001869!1.16e-09!21;UBERON:0000203!1.16e-09!21;UBERON:0002619!1.27e-08!17;UBERON:0002021!1.76e-07!10;UBERON:0000411!1.76e-07!10;UBERON:0001950!1.76e-07!10;UBERON:0003103!2.26e-07!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,3.14e-19,92;UBERON:0000073,1.83e-17,54;UBERON:0001049,9.30e-17,52;UBERON:0005068,9.30e-17,52;UBERON:0006241,9.30e-17,52;UBERON:0007135,9.30e-17,52;UBERON:0001017,1.50e-15,73;UBERON:0001016,1.92e-15,75;UBERON:0002020,7.26e-15,34;UBERON:0000955,1.12e-14,47;UBERON:0006238,1.12e-14,47;UBERON:0002616,1.79e-14,46;UBERON:0002346,2.20e-14,64;UBERON:0003075,2.20e-14,64;UBERON:0007284,2.20e-14,64;UBERON:0003528,3.35e-13,29;UBERON:0002791,3.35e-13,29;UBERON:0001893,3.35e-13,29;UBERON:0003080,1.62e-12,40;UBERON:0002780,4.27e-12,39;UBERON:0001890,4.27e-12,39;UBERON:0006240,4.27e-12,39;UBERON:0000025,1.71e-11,114;UBERON:0004111,3.82e-11,122;UBERON:0003056,6.15e-11,49;UBERON:0004121,7.67e-11,95;UBERON:0000924,7.67e-11,95;UBERON:0006601,7.67e-11,95;UBERON:0010371,2.20e-10,73;UBERON:0000956,1.16e-09,21;UBERON:0001869,1.16e-09,21;UBERON:0000203,1.16e-09,21;UBERON:0002619,1.27e-08,17;UBERON:0002021,1.76e-07,10;UBERON:0000411,1.76e-07,10;UBERON:0001950,1.76e-07,10;UBERON:0003103,2.26e-07,43 | |||
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| |||
|short_description=p1@Timm8b | |||
}} |
Revision as of 06:53, 5 August 2015
Short description: | p1@Timm8b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Timm8b_5end |
Coexpression cluster: | MCL_coexpression_mm9:3070 |
Association with transcript: | 6bp_to_ENSMUST00000044051, NM_013897, uc009pjw.2, uc009pjx.2_5end |
EntrezGene: | 30057 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.66e-09 | 23 |
neuroblast (sensu Vertebrata) | 5.66e-09 | 23 |
ectodermal cell | 9.74e-07 | 44 |
neurectodermal cell | 9.74e-07 | 44 |