FFCP PHASE1:Mm9::chr9:56483691..56483704,-: Difference between revisions
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{{FFCP|EntrezGene=235402|HGNC=|MCL_coexpression_id=2|UniProt=A9DA50|association_with_transcript=-256bp_to_ENSMUST00000114256_5end|description=CAGE_peak_6_at_Lingo1_5end|id=chr9:56483691..56483704,-|ontology_enrichment_celltype=CL:0000117!7.18e-18!23;CL:0000337!7.18e-18!23;CL:0002319!7.51e-14!43;CL:0000540!2.43e-13!33;CL:0000047!2.43e-13!33;CL:0000031!2.43e-13!33;CL:0000404!2.43e-13!33;CL:0000221!2.77e-13!44;CL:0000133!2.77e-13!44;CL:0000055!3.15e-11!50;CL:0000393!8.53e-11!39;CL:0000211!8.53e-11!39|ontology_enrichment_celltype_v019_2=CL:0000117,5.27e-12,23;CL:0000337,5.27e-12,23;CL:0002610,6.54e-09,3;CL:0002612,9.55e-09,3;CL:0000120,1.89e-08,3;CL:0000540,9.35e-08,33;CL:0000047,9.35e-08,33;CL:0000031,9.35e-08,33;CL:0000404,9.35e-08,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!2.78e-30!75;UBERON:0001016!2.78e-30!75;UBERON:0001017!3.96e-29!73;UBERON:0005743!3.96e-29!73;UBERON:0004121!5.62e-28!102;UBERON:0000924!5.62e-28!102;UBERON:0006601!5.62e-28!102;UBERON:0000033!8.68e-26!63;UBERON:0002020!3.50e-25!34;UBERON:0001049!6.84e-25!52;UBERON:0005068!6.84e-25!52;UBERON:0006241!6.84e-25!52;UBERON:0007135!6.84e-25!52;UBERON:0000955!1.88e-23!50;UBERON:0006238!1.88e-23!50;UBERON:0002346!5.12e-23!71;UBERON:0003075!5.12e-23!71;UBERON:0007284!5.12e-23!71;UBERON:0003056!7.14e-23!49;UBERON:0002616!1.29e-22!49;UBERON:0002791!7.89e-21!29;UBERON:0003528!7.89e-21!29;UBERON:0001893!7.89e-21!29;UBERON:0003080!1.44e-20!40;UBERON:0002780!1.15e-19!39;UBERON:0001890!1.15e-19!39;UBERON:0006240!1.15e-19!39;UBERON:0007811!1.55e-15!86;UBERON:0000956!7.34e-15!21;UBERON:0001869!7.34e-15!21;UBERON:0000203!7.34e-15!21;UBERON:0000153!2.02e-13!94;UBERON:0002619!1.39e-12!17;UBERON:0002021!1.39e-11!10;UBERON:0000411!1.39e-11!10;UBERON:0001950!1.39e-11!10;UBERON:0002420!3.87e-07!8;UBERON:0007245!3.87e-07!8;UBERON:0010009!3.87e-07!8;UBERON:0010011!3.87e-07!8;UBERON:0000454!3.87e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0002021,9.35e-30,10;UBERON:0000411,9.35e-30,10;UBERON:0001950,9.35e-30,10;UBERON:0001017,7.43e-28,73;UBERON:0001016,5.78e-27,75;UBERON:0000073,1.74e-26,54;UBERON:0002020,1.38e-24,34;UBERON:0001049,1.14e-20,52;UBERON:0005068,1.14e-20,52;UBERON:0006241,1.14e-20,52;UBERON:0007135,1.14e-20,52;UBERON:0002619,3.69e-20,17;UBERON:0004121,4.14e-20,95;UBERON:0000924,4.14e-20,95;UBERON:0006601,4.14e-20,95;UBERON:0000956,4.19e-19,21;UBERON:0001869,4.19e-19,21;UBERON:0000203,4.19e-19,21;UBERON:0003080,3.36e-18,40;UBERON:0003528,8.29e-18,29;UBERON:0002791,8.29e-18,29;UBERON:0001893,8.29e-18,29;UBERON:0000955,8.89e-17,47;UBERON:0006238,8.89e-17,47;UBERON:0002780,1.68e-16,39;UBERON:0001890,1.68e-16,39;UBERON:0006240,1.68e-16,39;UBERON:0002346,6.30e-16,64;UBERON:0003075,6.30e-16,64;UBERON:0007284,6.30e-16,64;UBERON:0002616,2.51e-15,46;UBERON:0003056,3.73e-14,49;UBERON:0010371,2.15e-13,73;UBERON:0010314,1.11e-09,92;UBERON:0004684,6.54e-09,3;UBERON:0002275,6.54e-09,3;UBERON:0001948,8.85e-09,5;UBERON:0002315,8.85e-09,5;UBERON:0002257,9.55e-09,3;UBERON:0000025,8.01e-08,114;UBERON:0002240,2.50e-07,6;UBERON:0005174,2.50e-07,6;UBERON:0001137,2.50e-07,6;UBERON:0004111,5.30e-07,122;UBERON:0011216,6.85e-07,194|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0,0,0.218025156380447,0,0,0.139986421625363,1.43752564364972,0,0,0,0,0,0,1.41621522601718,1.05798195854407,2.53532561402472,0,0,0,0,0,0,0.384218305321555,0.207379224616955,0.270011876663381,0.210324961351382,0.571301968807607,1.32521124570968,0.734944795289724,0.287536413054709,0.919218786610021,3.30347642998166,1.53224805702225,1.68967186581868,0.791317726381163,0.365950574409639,0.52091337055676,0.558365998002762,1.12552522006336,0.61119299110724,1.76777151284201,1.99320353118744,1.4911955666024,0.151452386666368,0.529000920747499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09706895166752,3.20250421973039,0.753926112677186,12.3415267336516,8.95004100656157,1.87009240103604,2.59586020908412,0,0.248813941220186,1.51633655060205,0,0.130120442962704,0,0.900310649026746,0.30140963567143,0.408218994907967,0.2562274405697,0.187403449119458,0.517406741478031,0,0,0.175951124163949,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57492912559016,0.720332286654991,0,0,0.213288250535234,0,0.128867461322093,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.35163505977661,0,0,0,0,0.215423397732799,0,0,0,0.404810701674894,0,0,1.28528526568723,0,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354680467284547,0.356737635204141,0,0.304464949114599,0,0,0,0,0.161464426695906,0.120625849856312,0,0.164140899745061,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.406638934253697,0.108005340821801,0.209088296014469,0,0,0.0826534557253359,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,5.64751842617067,9.66682996665071,9.73922372846974,9.10821866421544,13.0165678756422,12.8416962556249,6.07520250208625,12.158672487054,9.5159905886683,10.8729665467882,0.103787347584177,0,0,0,0,0.183843508450014,0,0,0.320919209591815,0,0,0.377252682772152,0.187283014939765,0.0640251524048693,0.287177344778066,0.476293691283074,0,0.192909220463705,0,0,0.342869252385415,0.177475806159338,0.715308569841963,0,0.0941093804153306,0.338458431566706,0,0.263069711437843,0.135804113845862,0.561142271657738,0.118635018124174,0.197008964751127,0,0,0,0.749431733813838,0.233931608445408,0,0.191288332068843,0,0|short_description=p6@Lingo1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:235402 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:A9DA50 | |||
|association_with_transcript=-256bp_to_ENSMUST00000114256_5end | |||
|cluster_id=chr9:56483691..56483704,- | |||
|description=CAGE_peak_6_at_Lingo1_5end | |||
|id=chr9:56483691..56483704,- | |||
|ontology_enrichment_celltype=CL:0000117!7.18e-18!23;CL:0000337!7.18e-18!23;CL:0002319!7.51e-14!43;CL:0000540!2.43e-13!33;CL:0000047!2.43e-13!33;CL:0000031!2.43e-13!33;CL:0000404!2.43e-13!33;CL:0000221!2.77e-13!44;CL:0000133!2.77e-13!44;CL:0000055!3.15e-11!50;CL:0000393!8.53e-11!39;CL:0000211!8.53e-11!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.27e-12,23;CL:0000337,5.27e-12,23;CL:0002610,6.54e-09,3;CL:0002612,9.55e-09,3;CL:0000120,1.89e-08,3;CL:0000540,9.35e-08,33;CL:0000047,9.35e-08,33;CL:0000031,9.35e-08,33;CL:0000404,9.35e-08,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.78e-30!75;UBERON:0001016!2.78e-30!75;UBERON:0001017!3.96e-29!73;UBERON:0005743!3.96e-29!73;UBERON:0004121!5.62e-28!102;UBERON:0000924!5.62e-28!102;UBERON:0006601!5.62e-28!102;UBERON:0000033!8.68e-26!63;UBERON:0002020!3.50e-25!34;UBERON:0001049!6.84e-25!52;UBERON:0005068!6.84e-25!52;UBERON:0006241!6.84e-25!52;UBERON:0007135!6.84e-25!52;UBERON:0000955!1.88e-23!50;UBERON:0006238!1.88e-23!50;UBERON:0002346!5.12e-23!71;UBERON:0003075!5.12e-23!71;UBERON:0007284!5.12e-23!71;UBERON:0003056!7.14e-23!49;UBERON:0002616!1.29e-22!49;UBERON:0002791!7.89e-21!29;UBERON:0003528!7.89e-21!29;UBERON:0001893!7.89e-21!29;UBERON:0003080!1.44e-20!40;UBERON:0002780!1.15e-19!39;UBERON:0001890!1.15e-19!39;UBERON:0006240!1.15e-19!39;UBERON:0007811!1.55e-15!86;UBERON:0000956!7.34e-15!21;UBERON:0001869!7.34e-15!21;UBERON:0000203!7.34e-15!21;UBERON:0000153!2.02e-13!94;UBERON:0002619!1.39e-12!17;UBERON:0002021!1.39e-11!10;UBERON:0000411!1.39e-11!10;UBERON:0001950!1.39e-11!10;UBERON:0002420!3.87e-07!8;UBERON:0007245!3.87e-07!8;UBERON:0010009!3.87e-07!8;UBERON:0010011!3.87e-07!8;UBERON:0000454!3.87e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,9.35e-30,10;UBERON:0000411,9.35e-30,10;UBERON:0001950,9.35e-30,10;UBERON:0001017,7.43e-28,73;UBERON:0001016,5.78e-27,75;UBERON:0000073,1.74e-26,54;UBERON:0002020,1.38e-24,34;UBERON:0001049,1.14e-20,52;UBERON:0005068,1.14e-20,52;UBERON:0006241,1.14e-20,52;UBERON:0007135,1.14e-20,52;UBERON:0002619,3.69e-20,17;UBERON:0004121,4.14e-20,95;UBERON:0000924,4.14e-20,95;UBERON:0006601,4.14e-20,95;UBERON:0000956,4.19e-19,21;UBERON:0001869,4.19e-19,21;UBERON:0000203,4.19e-19,21;UBERON:0003080,3.36e-18,40;UBERON:0003528,8.29e-18,29;UBERON:0002791,8.29e-18,29;UBERON:0001893,8.29e-18,29;UBERON:0000955,8.89e-17,47;UBERON:0006238,8.89e-17,47;UBERON:0002780,1.68e-16,39;UBERON:0001890,1.68e-16,39;UBERON:0006240,1.68e-16,39;UBERON:0002346,6.30e-16,64;UBERON:0003075,6.30e-16,64;UBERON:0007284,6.30e-16,64;UBERON:0002616,2.51e-15,46;UBERON:0003056,3.73e-14,49;UBERON:0010371,2.15e-13,73;UBERON:0010314,1.11e-09,92;UBERON:0004684,6.54e-09,3;UBERON:0002275,6.54e-09,3;UBERON:0001948,8.85e-09,5;UBERON:0002315,8.85e-09,5;UBERON:0002257,9.55e-09,3;UBERON:0000025,8.01e-08,114;UBERON:0002240,2.50e-07,6;UBERON:0005174,2.50e-07,6;UBERON:0001137,2.50e-07,6;UBERON:0004111,5.30e-07,122;UBERON:0011216,6.85e-07,194 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0,0,0.218025156380447,0,0,0.139986421625363,1.43752564364972,0,0,0,0,0,0,1.41621522601718,1.05798195854407,2.53532561402472,0,0,0,0,0,0,0.384218305321555,0.207379224616955,0.270011876663381,0.210324961351382,0.571301968807607,1.32521124570968,0.734944795289724,0.287536413054709,0.919218786610021,3.30347642998166,1.53224805702225,1.68967186581868,0.791317726381163,0.365950574409639,0.52091337055676,0.558365998002762,1.12552522006336,0.61119299110724,1.76777151284201,1.99320353118744,1.4911955666024,0.151452386666368,0.529000920747499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09706895166752,3.20250421973039,0.753926112677186,12.3415267336516,8.95004100656157,1.87009240103604,2.59586020908412,0,0.248813941220186,1.51633655060205,0,0.130120442962704,0,0.900310649026746,0.30140963567143,0.408218994907967,0.2562274405697,0.187403449119458,0.517406741478031,0,0,0.175951124163949,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57492912559016,0.720332286654991,0,0,0.213288250535234,0,0.128867461322093,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.35163505977661,0,0,0,0,0.215423397732799,0,0,0,0.404810701674894,0,0,1.28528526568723,0,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354680467284547,0.356737635204141,0,0.304464949114599,0,0,0,0,0.161464426695906,0.120625849856312,0,0.164140899745061,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.406638934253697,0.108005340821801,0.209088296014469,0,0,0.0826534557253359,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,5.64751842617067,9.66682996665071,9.73922372846974,9.10821866421544,13.0165678756422,12.8416962556249,6.07520250208625,12.158672487054,9.5159905886683,10.8729665467882,0.103787347584177,0,0,0,0,0.183843508450014,0,0,0.320919209591815,0,0,0.377252682772152,0.187283014939765,0.0640251524048693,0.287177344778066,0.476293691283074,0,0.192909220463705,0,0,0.342869252385415,0.177475806159338,0.715308569841963,0,0.0941093804153306,0.338458431566706,0,0.263069711437843,0.135804113845862,0.561142271657738,0.118635018124174,0.197008964751127,0,0,0,0.749431733813838,0.233931608445408,0,0.191288332068843,0,0 | |||
|short_description=p6@Lingo1 | |||
}} |
Revision as of 08:38, 5 August 2015
Short description: | p6@Lingo1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Lingo1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | -256bp_to_ENSMUST00000114256_5end |
EntrezGene: | 235402 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.27e-12 | 23 |
neuroblast (sensu Vertebrata) | 5.27e-12 | 23 |
raphe nuclei neuron | 6.54e-09 | 3 |
neuron of the ventral spinal cord | 9.55e-09 | 3 |
granule cell | 1.89e-08 | 3 |
neuron | 9.35e-08 | 33 |
neuronal stem cell | 9.35e-08 | 33 |
neuroblast | 9.35e-08 | 33 |
electrically signaling cell | 9.35e-08 | 33 |