FFCP PHASE1:Mm9::chr15:6530960..6530979,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=316 | |MCL_coexpression_id=316 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:6530960..6530979,+ | |||
|description=CAGE_peak_at_chr15:6530960..6530979,+ | |description=CAGE_peak_at_chr15:6530960..6530979,+ | ||
|id=chr15:6530960..6530979,+ | |id=chr15:6530960..6530979,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,9.78e-10,17;CL:0002087,9.78e-10,17;CL:0000791,1.11e-09,9;CL:0000789,1.11e-09,9;CL:0002420,1.11e-09,9;CL:0002419,1.11e-09,9;CL:0000790,1.11e-09,9;CL:0002476,6.41e-09,2;CL:0000084,7.06e-08,11;CL:0000827,7.06e-08,11;CL:0000838,3.35e-07,12;CL:0000624,4.62e-07,8 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!8.34e-17!48;UBERON:0002405!1.07e-16!70;UBERON:0004177!1.33e-15!29;UBERON:0002390!1.45e-14!45;UBERON:0003061!1.45e-14!45;UBERON:0005057!4.07e-14!51;UBERON:0006562!3.14e-12!24;UBERON:0001557!3.14e-12!24;UBERON:0001042!3.14e-12!24;UBERON:0008814!3.14e-12!24;UBERON:0009145!3.14e-12!24;UBERON:0002370!8.07e-12!23;UBERON:0000974!8.07e-12!23;UBERON:0004807!8.07e-12!23;UBERON:0005058!8.07e-12!23;UBERON:0003351!8.07e-12!23;UBERON:0009113!8.07e-12!23;UBERON:0003295!8.07e-12!23;UBERON:0009722!8.07e-12!23;UBERON:0005562!8.07e-12!23;UBERON:0007690!8.07e-12!23;UBERON:0003408!4.98e-11!24;UBERON:0000072!4.72e-10!27;UBERON:0000065!2.88e-08!41;UBERON:0001004!7.10e-08!42;UBERON:0002368!8.81e-08!60;UBERON:0000063!9.72e-08!35;UBERON:0003929!5.01e-07!55;UBERON:0003081!6.97e-07!88;UBERON:0001041!7.87e-07!92;UBERON:0000077!8.63e-07!97 | |ontology_enrichment_uberon=UBERON:0002193!8.34e-17!48;UBERON:0002405!1.07e-16!70;UBERON:0004177!1.33e-15!29;UBERON:0002390!1.45e-14!45;UBERON:0003061!1.45e-14!45;UBERON:0005057!4.07e-14!51;UBERON:0006562!3.14e-12!24;UBERON:0001557!3.14e-12!24;UBERON:0001042!3.14e-12!24;UBERON:0008814!3.14e-12!24;UBERON:0009145!3.14e-12!24;UBERON:0002370!8.07e-12!23;UBERON:0000974!8.07e-12!23;UBERON:0004807!8.07e-12!23;UBERON:0005058!8.07e-12!23;UBERON:0003351!8.07e-12!23;UBERON:0009113!8.07e-12!23;UBERON:0003295!8.07e-12!23;UBERON:0009722!8.07e-12!23;UBERON:0005562!8.07e-12!23;UBERON:0007690!8.07e-12!23;UBERON:0003408!4.98e-11!24;UBERON:0000072!4.72e-10!27;UBERON:0000065!2.88e-08!41;UBERON:0001004!7.10e-08!42;UBERON:0002368!8.81e-08!60;UBERON:0000063!9.72e-08!35;UBERON:0003929!5.01e-07!55;UBERON:0003081!6.97e-07!88;UBERON:0001041!7.87e-07!92;UBERON:0000077!8.63e-07!97 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.58e-32,23;UBERON:0000974,4.58e-32,23;UBERON:0004807,4.58e-32,23;UBERON:0005058,4.58e-32,23;UBERON:0003351,4.58e-32,23;UBERON:0009113,4.58e-32,23;UBERON:0003295,4.58e-32,23;UBERON:0009722,4.58e-32,23;UBERON:0005562,4.58e-32,23;UBERON:0007690,4.58e-32,23;UBERON:0006562,1.29e-30,24;UBERON:0003408,1.29e-30,24;UBERON:0001557,1.29e-30,24;UBERON:0001042,1.29e-30,24;UBERON:0008814,1.29e-30,24;UBERON:0009145,1.29e-30,24;UBERON:0000072,6.63e-27,27;UBERON:0004177,7.40e-25,29;UBERON:0005057,7.40e-25,29;UBERON:0002193,5.36e-24,48;UBERON:0002405,5.36e-24,48;UBERON:0002390,8.24e-23,45;UBERON:0003061,8.24e-23,45;UBERON:0000077,4.08e-20,35;UBERON:0007811,1.77e-19,36;UBERON:0000065,9.28e-17,41;UBERON:0001004,2.71e-16,42;UBERON:0000153,7.56e-16,43;UBERON:0003929,1.42e-13,55;UBERON:0000490,1.83e-12,66;UBERON:0002368,3.45e-12,60;UBERON:0002530,5.11e-11,65;UBERON:0005911,3.34e-10,69;UBERON:0003081,3.73e-10,87;UBERON:0000949,1.19e-09,72;UBERON:0001041,2.20e-08,80;UBERON:0000926,2.07e-07,120;UBERON:0004120,2.07e-07,120;UBERON:0006603,2.07e-07,120 | |||
|phase1_expression=0,0,0,0,0,0,0,1.29123323441576,1.267098499365,0.936258105287974,0.34243593645101,0,1.36960583944965,1.48614684112296,0,0.404950534779652,0,0.473193248037357,0.411343300817216,0,0.0850432901510698,0,0,0.639969691173627,0.45881856213434,0,0.430761996159075,0.215471232685889,0,0,0.443461021310609,0,0,0,0,0,0,1.67412652294763,0,0,1.17646297606203,0,0.971020706062307,0,0,0,0,0,0,0,0,0,0,0,3.02484419228218,0,0,0,0,0,0,0,0,2.2497492932035,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0.151452386666368,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0.519572009205738,0.35333957451034,0,0,0,0,0,0,0,0,4.14300613835475,0.148442139064825,0,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0.220841518460394,0.484875253135222,0,0,0,0.510914110417183,0,0,0,0,0.457500602818626,0,0,0,0,0,0.101839363850316,0.373220911830279,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0.0810688095458557,0,0.439100230582101,0,0,0.102904612379284,0.330418782983798,0,0.213288250535234,0,0,0,0,0,0,0,0,0.397912944082302,0.19496408711912,0,0.432276099749388,0.398282546508734,0,0,0,0,0,0.0701358198903186,0,0.147610147979602,0,0.123397163921801,0,0.166845105716094,0.196558995113203,0.224862112384854,0.202860121388503,0,0,0.287696137450811,0.324270453550071,0.549122826376163,1.43768206527355,0,0.312037673114561,0.505157755894224,0,0.482443521363367,0.184753190166605,0,0,0,0,0,0,0,0.157635144106191,0,0.318909537314974,0.655453258862952,0.172684981865896,0.144649058581512,3.01582567878545,5.98296252200581,0,0,0,0.117211686592203,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0,0,0,0,0.329940245945071,0,0,0,0.188605079755898,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0.23467170806371,0,0,0.16488625294148,0.161464426695906,0.120625849856312,0,0,0.582961673259701,0,0.512612642393558,0.206386867963223,0.555583582109135,0.376736914009382,0.956859594047176,0.457556346413045,0.509935289981566,0.279902904647316,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0,0.56369293868419,0,0,0,0,0.337912250981556,0,0,0,0,0,1.26404448251271,0,1.02710957164827,1.03936658382236,0.895133478337407,1.58945083825012,1.68273629327956,1.62458479892035,1.61546319917036,1.82896335972,3.32726410951574,1.65678397257579,1.53938946624527,1.5193997283604,0.226730383615211,0,0,0,0,0.187682475451182,0,0.214368379079066,0,0,0,1.14579102687879,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.367687016900028,0,0,0,0,0.25347929989024,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0.237270036248348,0.0985044823755635,0,0,0.192906610981141,0,0.233931608445408,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,1.29123323441576,1.267098499365,0.936258105287974,0.34243593645101,0,1.36960583944965,1.48614684112296,0,0.404950534779652,0,0.473193248037357,0.411343300817216,0,0.0850432901510698,0,0,0.639969691173627,0.45881856213434,0,0.430761996159075,0.215471232685889,0,0,0.443461021310609,0,0,0,0,0,0,1.67412652294763,0,0,1.17646297606203,0,0.971020706062307,0,0,0,0,0,0,0,0,0,0,0,3.02484419228218,0,0,0,0,0,0,0,0,2.2497492932035,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0.151452386666368,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0.519572009205738,0.35333957451034,0,0,0,0,0,0,0,0,4.14300613835475,0.148442139064825,0,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0.220841518460394,0.484875253135222,0,0,0,0.510914110417183,0,0,0,0,0.457500602818626,0,0,0,0,0,0.101839363850316,0.373220911830279,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0.0810688095458557,0,0.439100230582101,0,0,0.102904612379284,0.330418782983798,0,0.213288250535234,0,0,0,0,0,0,0,0,0.397912944082302,0.19496408711912,0,0.432276099749388,0.398282546508734,0,0,0,0,0,0.0701358198903186,0,0.147610147979602,0,0.123397163921801,0,0.166845105716094,0.196558995113203,0.224862112384854,0.202860121388503,0,0,0.287696137450811,0.324270453550071,0.549122826376163,1.43768206527355,0,0.312037673114561,0.505157755894224,0,0.482443521363367,0.184753190166605,0,0,0,0,0,0,0,0.157635144106191,0,0.318909537314974,0.655453258862952,0.172684981865896,0.144649058581512,3.01582567878545,5.98296252200581,0,0,0,0.117211686592203,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0,0,0,0,0.329940245945071,0,0,0,0.188605079755898,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0.23467170806371,0,0,0.16488625294148,0.161464426695906,0.120625849856312,0,0,0.582961673259701,0,0.512612642393558,0.206386867963223,0.555583582109135,0.376736914009382,0.956859594047176,0.457556346413045,0.509935289981566,0.279902904647316,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0,0.56369293868419,0,0,0,0,0.337912250981556,0,0,0,0,0,1.26404448251271,0,1.02710957164827,1.03936658382236,0.895133478337407,1.58945083825012,1.68273629327956,1.62458479892035,1.61546319917036,1.82896335972,3.32726410951574,1.65678397257579,1.53938946624527,1.5193997283604,0.226730383615211,0,0,0,0,0.187682475451182,0,0.214368379079066,0,0,0,1.14579102687879,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.367687016900028,0,0,0,0,0.25347929989024,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0.237270036248348,0.0985044823755635,0,0,0.192906610981141,0,0.233931608445408,0,0,0,0 | ||
|short_description=p@chr15:6530960..6530979,+ | |short_description=p@chr15:6530960..6530979,+ | ||
}} | }} |
Latest revision as of 09:24, 5 August 2015
Short description: | p@chr15:6530960..6530979, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:6530960..6530979, + |
Coexpression cluster: | MCL_coexpression_mm9:316 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 9.78e-10 | 17 |
nongranular leukocyte | 9.78e-10 | 17 |
mature alpha-beta T cell | 1.11e-09 | 9 |
alpha-beta T cell | 1.11e-09 | 9 |
immature T cell | 1.11e-09 | 9 |
mature T cell | 1.11e-09 | 9 |
immature alpha-beta T cell | 1.11e-09 | 9 |
bone marrow macrophage | 6.41e-09 | 2 |
T cell | 7.06e-08 | 11 |
pro-T cell | 7.06e-08 | 11 |
lymphoid lineage restricted progenitor cell | 3.35e-07 | 12 |
CD4-positive, alpha-beta T cell | 4.62e-07 | 8 |