FFCP PHASE1:Mm9::chr6:21165331..21165353,+: Difference between revisions
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{{FFCP|EntrezGene=16508|HGNC=|MCL_coexpression_id=121|UniProt=Q9Z0V2|association_with_transcript=-149bp_to_ENSMUST00000081542_5end|description=CAGE_peak_3_at_Kcnd2_5end|id=chr6:21165331..21165353,+|ontology_enrichment_celltype=CL:0000117!2.52e-10!23;CL:0000337!2.52e-10!23;CL:0000540!5.05e-07!33;CL:0000047!5.05e-07!33;CL:0000031!5.05e-07!33;CL:0000404!5.05e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,1.91e-13,23;CL:0000337,1.91e-13,23;CL:0000540,1.82e-08,33;CL:0000047,1.82e-08,33;CL:0000031,1.82e-08,33;CL:0000404,1.82e-08,33;CL:0002610,4.28e-08,3;CL:0002614,6.49e-08,3;CL:0002612,3.57e-07,3;CL:0000393,9.99e-07,39;CL:0000211,9.99e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.22e-16!73;UBERON:0005743!2.22e-16!73;UBERON:0001049!8.48e-16!52;UBERON:0005068!8.48e-16!52;UBERON:0006241!8.48e-16!52;UBERON:0007135!8.48e-16!52;UBERON:0000073!2.03e-15!75;UBERON:0001016!2.03e-15!75;UBERON:0000955!9.25e-15!50;UBERON:0006238!9.25e-15!50;UBERON:0002020!2.53e-14!34;UBERON:0002616!5.57e-14!49;UBERON:0002346!1.30e-12!71;UBERON:0003075!1.30e-12!71;UBERON:0007284!1.30e-12!71;UBERON:0000033!5.38e-11!63;UBERON:0002791!7.45e-11!29;UBERON:0003528!7.45e-11!29;UBERON:0001893!7.45e-11!29;UBERON:0003080!3.96e-10!40;UBERON:0004121!4.21e-10!102;UBERON:0000924!4.21e-10!102;UBERON:0006601!4.21e-10!102;UBERON:0002780!1.67e-09!39;UBERON:0001890!1.67e-09!39;UBERON:0006240!1.67e-09!39;UBERON:0003056!1.72e-08!49;UBERON:0000956!8.53e-08!21;UBERON:0001869!8.53e-08!21;UBERON:0000203!8.53e-08!21;UBERON:0002021!1.03e-07!10;UBERON:0000411!1.03e-07!10;UBERON:0001950!1.03e-07!10;UBERON:0002619!1.11e-07!17;UBERON:0003076!5.54e-07!12;UBERON:0003057!5.54e-07!12;UBERON:0000025!9.46e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.13e-27,54;UBERON:0001017,1.78e-25,73;UBERON:0001016,1.37e-24,75;UBERON:0001049,3.21e-24,52;UBERON:0005068,3.21e-24,52;UBERON:0006241,3.21e-24,52;UBERON:0007135,3.21e-24,52;UBERON:0002346,1.97e-18,64;UBERON:0003075,1.97e-18,64;UBERON:0007284,1.97e-18,64;UBERON:0002020,6.64e-18,34;UBERON:0004121,8.84e-18,95;UBERON:0000924,8.84e-18,95;UBERON:0006601,8.84e-18,95;UBERON:0000955,2.59e-17,47;UBERON:0006238,2.59e-17,47;UBERON:0010314,5.57e-17,92;UBERON:0003076,1.07e-16,12;UBERON:0003057,1.07e-16,12;UBERON:0002616,7.89e-16,46;UBERON:0010371,2.40e-15,73;UBERON:0002240,1.69e-12,6;UBERON:0005174,1.69e-12,6;UBERON:0001137,1.69e-12,6;UBERON:0000025,2.98e-12,114;UBERON:0002021,1.52e-11,10;UBERON:0000411,1.52e-11,10;UBERON:0001950,1.52e-11,10;UBERON:0003080,1.77e-11,40;UBERON:0003528,4.02e-11,29;UBERON:0002791,4.02e-11,29;UBERON:0001893,4.02e-11,29;UBERON:0004111,5.87e-11,122;UBERON:0001948,1.99e-10,5;UBERON:0002315,1.99e-10,5;UBERON:0002780,2.54e-10,39;UBERON:0001890,2.54e-10,39;UBERON:0006240,2.54e-10,39;UBERON:0002950,9.47e-10,4;UBERON:0001891,9.47e-10,4;UBERON:0009616,9.47e-10,4;UBERON:0010286,9.47e-10,4;UBERON:0003056,1.21e-08,49;UBERON:0002619,4.09e-08,17;UBERON:0004684,4.28e-08,3;UBERON:0002275,4.28e-08,3;UBERON:0002038,6.49e-08,3;UBERON:0009663,6.49e-08,3;UBERON:0009661,6.49e-08,3;UBERON:0000125,6.49e-08,3;UBERON:0002308,6.49e-08,3;UBERON:0000956,9.88e-08,21;UBERON:0001869,9.88e-08,21;UBERON:0000203,9.88e-08,21;UBERON:0002257,3.57e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,1.27564935226605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,1.41621522601718,1.05798195854407,0.633831403506179,0,0,0,0,0,0.299600110518405,0,0.103689612308478,0.270011876663381,0,2.28520787523043,1.54607978666129,0.367472397644862,0.383381884072945,0,4.40463523997555,4.08599481872601,4.30098293117482,0.923204014111357,0.274462930807229,0,3.62937898701795,5.6276261003168,3.0559649555362,4.12480019663135,2.70506193518296,1.67759501242771,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.29688427812965,0.173485326766136,0,0.230615497256059,0,0.117588707135705,0,0,0,0,0,0,0,0,8.19786231632332,12.1479089951804,0,0,0,0,2.69623150928681,2.28750301409313,0.125654352112864,1.56441888173049,2.55715457330331,3.1168206683934,3.40706652442291,0,0,0,0,0,0,0.180062129805349,0.30140963567143,0.0680364991513279,0,0.187403449119458,0,0,0.567318240503458,0.527853372491847,0.43839146485515,0,0,0,2.18937693500343,0,0,0,0,0.703578179943289,0,0.473489471170421,0.393528463494808,0.771335564436891,0.232533944750408,0,0.583826711835847,0.493679549740441,1.47750717671186,2.75633952455909,2.77779976108131,2.41505126820156,3.35516046900929,3.36463917702604,0.514523061896422,0,0,0,0,0.128867461322093,0,0,0.190225626112559,0,0,0,0,0,0.898819408654221,0,0,0,0.456994050438915,0,0,0.193952487167626,0.350679099451593,2.78240763346732,0.442830443938806,0.31399745568275,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.37898282354097,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56880943980467,1.75817529888305,0,0,0,0.390438744296638,0,0,0,0.283076530788832,0,0.292255857911312,0,4.81981974632711,1.56134093729095,0.178065603667255,0.651547837414304,0.659880491890142,0,0.242780636154981,0,0.188605079755898,0,0,0,0,0,0,0,0,0.680879211507576,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,3.52308073819968,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.216010681643603,0,0,0.134864346384821,0,0,0,0,0,0.448549638131936,0.330916980914195,0.194451188344048,0.516639293910924,0.675824501963113,0.117357238645754,0.13020438484395,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0.501572104035363,1.12950368523413,1.38097570952153,0.572895513439397,2.23409137046794,2.05524755931193,3.0215755895588,2.02506750069542,1.80128481289688,1.81256963593682,0.51776031175182,0.103787347584177,0.798049746802062,0.170733605754134,0.486213434136588,0.209613162627982,0,0.222246727801615,0.206035057238894,0,0.252697211763798,0.50695859978048,0.754505365544305,0,0.192075457214608,0.516919220600519,0.476293691283074,0.231768651889711,0.77163688185482,0,0.441596760403192,0.685738504770831,0.887379030796687,0.238436189947321,0.436039249896986,0.376437521661322,0.25384382367503,0.548783918618318,0.526139422875686,0.407412341537585,0,0.593175090620871,0.197008964751127,0,0.619747364743864,0,0.499621155875892,0.233931608445408,0.214871054048298,0,0,0|short_description=p3@Kcnd2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:16508 | |||
|HGNC= | |||
|MCL_coexpression_id=121 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9Z0V2 | |||
|association_with_transcript=-149bp_to_ENSMUST00000081542_5end | |||
|cluster_id=chr6:21165331..21165353,+ | |||
|description=CAGE_peak_3_at_Kcnd2_5end | |||
|id=chr6:21165331..21165353,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.52e-10!23;CL:0000337!2.52e-10!23;CL:0000540!5.05e-07!33;CL:0000047!5.05e-07!33;CL:0000031!5.05e-07!33;CL:0000404!5.05e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.91e-13,23;CL:0000337,1.91e-13,23;CL:0000540,1.82e-08,33;CL:0000047,1.82e-08,33;CL:0000031,1.82e-08,33;CL:0000404,1.82e-08,33;CL:0002610,4.28e-08,3;CL:0002614,6.49e-08,3;CL:0002612,3.57e-07,3;CL:0000393,9.99e-07,39;CL:0000211,9.99e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.22e-16!73;UBERON:0005743!2.22e-16!73;UBERON:0001049!8.48e-16!52;UBERON:0005068!8.48e-16!52;UBERON:0006241!8.48e-16!52;UBERON:0007135!8.48e-16!52;UBERON:0000073!2.03e-15!75;UBERON:0001016!2.03e-15!75;UBERON:0000955!9.25e-15!50;UBERON:0006238!9.25e-15!50;UBERON:0002020!2.53e-14!34;UBERON:0002616!5.57e-14!49;UBERON:0002346!1.30e-12!71;UBERON:0003075!1.30e-12!71;UBERON:0007284!1.30e-12!71;UBERON:0000033!5.38e-11!63;UBERON:0002791!7.45e-11!29;UBERON:0003528!7.45e-11!29;UBERON:0001893!7.45e-11!29;UBERON:0003080!3.96e-10!40;UBERON:0004121!4.21e-10!102;UBERON:0000924!4.21e-10!102;UBERON:0006601!4.21e-10!102;UBERON:0002780!1.67e-09!39;UBERON:0001890!1.67e-09!39;UBERON:0006240!1.67e-09!39;UBERON:0003056!1.72e-08!49;UBERON:0000956!8.53e-08!21;UBERON:0001869!8.53e-08!21;UBERON:0000203!8.53e-08!21;UBERON:0002021!1.03e-07!10;UBERON:0000411!1.03e-07!10;UBERON:0001950!1.03e-07!10;UBERON:0002619!1.11e-07!17;UBERON:0003076!5.54e-07!12;UBERON:0003057!5.54e-07!12;UBERON:0000025!9.46e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.13e-27,54;UBERON:0001017,1.78e-25,73;UBERON:0001016,1.37e-24,75;UBERON:0001049,3.21e-24,52;UBERON:0005068,3.21e-24,52;UBERON:0006241,3.21e-24,52;UBERON:0007135,3.21e-24,52;UBERON:0002346,1.97e-18,64;UBERON:0003075,1.97e-18,64;UBERON:0007284,1.97e-18,64;UBERON:0002020,6.64e-18,34;UBERON:0004121,8.84e-18,95;UBERON:0000924,8.84e-18,95;UBERON:0006601,8.84e-18,95;UBERON:0000955,2.59e-17,47;UBERON:0006238,2.59e-17,47;UBERON:0010314,5.57e-17,92;UBERON:0003076,1.07e-16,12;UBERON:0003057,1.07e-16,12;UBERON:0002616,7.89e-16,46;UBERON:0010371,2.40e-15,73;UBERON:0002240,1.69e-12,6;UBERON:0005174,1.69e-12,6;UBERON:0001137,1.69e-12,6;UBERON:0000025,2.98e-12,114;UBERON:0002021,1.52e-11,10;UBERON:0000411,1.52e-11,10;UBERON:0001950,1.52e-11,10;UBERON:0003080,1.77e-11,40;UBERON:0003528,4.02e-11,29;UBERON:0002791,4.02e-11,29;UBERON:0001893,4.02e-11,29;UBERON:0004111,5.87e-11,122;UBERON:0001948,1.99e-10,5;UBERON:0002315,1.99e-10,5;UBERON:0002780,2.54e-10,39;UBERON:0001890,2.54e-10,39;UBERON:0006240,2.54e-10,39;UBERON:0002950,9.47e-10,4;UBERON:0001891,9.47e-10,4;UBERON:0009616,9.47e-10,4;UBERON:0010286,9.47e-10,4;UBERON:0003056,1.21e-08,49;UBERON:0002619,4.09e-08,17;UBERON:0004684,4.28e-08,3;UBERON:0002275,4.28e-08,3;UBERON:0002038,6.49e-08,3;UBERON:0009663,6.49e-08,3;UBERON:0009661,6.49e-08,3;UBERON:0000125,6.49e-08,3;UBERON:0002308,6.49e-08,3;UBERON:0000956,9.88e-08,21;UBERON:0001869,9.88e-08,21;UBERON:0000203,9.88e-08,21;UBERON:0002257,3.57e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,1.27564935226605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,1.41621522601718,1.05798195854407,0.633831403506179,0,0,0,0,0,0.299600110518405,0,0.103689612308478,0.270011876663381,0,2.28520787523043,1.54607978666129,0.367472397644862,0.383381884072945,0,4.40463523997555,4.08599481872601,4.30098293117482,0.923204014111357,0.274462930807229,0,3.62937898701795,5.6276261003168,3.0559649555362,4.12480019663135,2.70506193518296,1.67759501242771,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.29688427812965,0.173485326766136,0,0.230615497256059,0,0.117588707135705,0,0,0,0,0,0,0,0,8.19786231632332,12.1479089951804,0,0,0,0,2.69623150928681,2.28750301409313,0.125654352112864,1.56441888173049,2.55715457330331,3.1168206683934,3.40706652442291,0,0,0,0,0,0,0.180062129805349,0.30140963567143,0.0680364991513279,0,0.187403449119458,0,0,0.567318240503458,0.527853372491847,0.43839146485515,0,0,0,2.18937693500343,0,0,0,0,0.703578179943289,0,0.473489471170421,0.393528463494808,0.771335564436891,0.232533944750408,0,0.583826711835847,0.493679549740441,1.47750717671186,2.75633952455909,2.77779976108131,2.41505126820156,3.35516046900929,3.36463917702604,0.514523061896422,0,0,0,0,0.128867461322093,0,0,0.190225626112559,0,0,0,0,0,0.898819408654221,0,0,0,0.456994050438915,0,0,0.193952487167626,0.350679099451593,2.78240763346732,0.442830443938806,0.31399745568275,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.37898282354097,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56880943980467,1.75817529888305,0,0,0,0.390438744296638,0,0,0,0.283076530788832,0,0.292255857911312,0,4.81981974632711,1.56134093729095,0.178065603667255,0.651547837414304,0.659880491890142,0,0.242780636154981,0,0.188605079755898,0,0,0,0,0,0,0,0,0.680879211507576,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,3.52308073819968,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.216010681643603,0,0,0.134864346384821,0,0,0,0,0,0.448549638131936,0.330916980914195,0.194451188344048,0.516639293910924,0.675824501963113,0.117357238645754,0.13020438484395,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0.501572104035363,1.12950368523413,1.38097570952153,0.572895513439397,2.23409137046794,2.05524755931193,3.0215755895588,2.02506750069542,1.80128481289688,1.81256963593682,0.51776031175182,0.103787347584177,0.798049746802062,0.170733605754134,0.486213434136588,0.209613162627982,0,0.222246727801615,0.206035057238894,0,0.252697211763798,0.50695859978048,0.754505365544305,0,0.192075457214608,0.516919220600519,0.476293691283074,0.231768651889711,0.77163688185482,0,0.441596760403192,0.685738504770831,0.887379030796687,0.238436189947321,0.436039249896986,0.376437521661322,0.25384382367503,0.548783918618318,0.526139422875686,0.407412341537585,0,0.593175090620871,0.197008964751127,0,0.619747364743864,0,0.499621155875892,0.233931608445408,0.214871054048298,0,0,0 | |||
|short_description=p3@Kcnd2 | |||
}} |
Revision as of 11:46, 5 August 2015
Short description: | p3@Kcnd2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Kcnd2_5end |
Coexpression cluster: | MCL_coexpression_mm9:121 |
Association with transcript: | -149bp_to_ENSMUST00000081542_5end |
EntrezGene: | 16508 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.91e-13 | 23 |
neuroblast (sensu Vertebrata) | 1.91e-13 | 23 |
neuron | 1.82e-08 | 33 |
neuronal stem cell | 1.82e-08 | 33 |
neuroblast | 1.82e-08 | 33 |
electrically signaling cell | 1.82e-08 | 33 |
raphe nuclei neuron | 4.28e-08 | 3 |
neuron of the substantia nigra | 6.49e-08 | 3 |
neuron of the ventral spinal cord | 3.57e-07 | 3 |
electrically responsive cell | 9.99e-07 | 39 |
electrically active cell | 9.99e-07 | 39 |