FFCP PHASE1:Mm9::chr6:30755165..30755176,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=145 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=381bp_to_uc009bfw.1_5end | |association_with_transcript=381bp_to_uc009bfw.1_5end | ||
|cluster_id=chr6:30755165..30755176,+ | |||
|description=CAGE_peak_14_at_uc009bfw.1_5end | |description=CAGE_peak_14_at_uc009bfw.1_5end | ||
|id=chr6:30755165..30755176,+ | |id=chr6:30755165..30755176,+ | ||
|ontology_enrichment_celltype=CL:0000117!2.03e-09!23;CL:0000337!2.03e-09!23 | |ontology_enrichment_celltype=CL:0000117!2.03e-09!23;CL:0000337!2.03e-09!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0002610,1.91e-26,3;CL:0002612,7.25e-13,3;CL:0000117,1.27e-09,23;CL:0000337,1.27e-09,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!9.83e-13!34;UBERON:0002616!3.52e-11!49;UBERON:0001049!5.03e-11!52;UBERON:0005068!5.03e-11!52;UBERON:0006241!5.03e-11!52;UBERON:0007135!5.03e-11!52;UBERON:0002791!5.50e-11!29;UBERON:0003528!5.50e-11!29;UBERON:0001893!5.50e-11!29;UBERON:0000955!8.31e-11!50;UBERON:0006238!8.31e-11!50;UBERON:0001017!4.57e-09!73;UBERON:0005743!4.57e-09!73;UBERON:0000025!9.54e-09!114;UBERON:0000073!1.34e-08!75;UBERON:0001016!1.34e-08!75;UBERON:0003080!1.96e-08!40;UBERON:0004111!4.52e-08!122;UBERON:0000033!6.35e-08!63;UBERON:0002780!1.00e-07!39;UBERON:0001890!1.00e-07!39;UBERON:0006240!1.00e-07!39;UBERON:0002346!1.75e-07!71;UBERON:0003075!1.75e-07!71;UBERON:0007284!1.75e-07!71;UBERON:0002021!5.08e-07!10;UBERON:0000411!5.08e-07!10;UBERON:0001950!5.08e-07!10;UBERON:0000956!5.56e-07!21;UBERON:0001869!5.56e-07!21;UBERON:0000203!5.56e-07!21 | |ontology_enrichment_uberon=UBERON:0002020!9.83e-13!34;UBERON:0002616!3.52e-11!49;UBERON:0001049!5.03e-11!52;UBERON:0005068!5.03e-11!52;UBERON:0006241!5.03e-11!52;UBERON:0007135!5.03e-11!52;UBERON:0002791!5.50e-11!29;UBERON:0003528!5.50e-11!29;UBERON:0001893!5.50e-11!29;UBERON:0000955!8.31e-11!50;UBERON:0006238!8.31e-11!50;UBERON:0001017!4.57e-09!73;UBERON:0005743!4.57e-09!73;UBERON:0000025!9.54e-09!114;UBERON:0000073!1.34e-08!75;UBERON:0001016!1.34e-08!75;UBERON:0003080!1.96e-08!40;UBERON:0004111!4.52e-08!122;UBERON:0000033!6.35e-08!63;UBERON:0002780!1.00e-07!39;UBERON:0001890!1.00e-07!39;UBERON:0006240!1.00e-07!39;UBERON:0002346!1.75e-07!71;UBERON:0003075!1.75e-07!71;UBERON:0007284!1.75e-07!71;UBERON:0002021!5.08e-07!10;UBERON:0000411!5.08e-07!10;UBERON:0001950!5.08e-07!10;UBERON:0000956!5.56e-07!21;UBERON:0001869!5.56e-07!21;UBERON:0000203!5.56e-07!21 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004684,1.91e-26,3;UBERON:0002275,1.91e-26,3;UBERON:0002021,1.84e-14,10;UBERON:0000411,1.84e-14,10;UBERON:0001950,1.84e-14,10;UBERON:0002257,7.25e-13,3;UBERON:0000073,1.01e-12,54;UBERON:0001017,2.80e-09,73;UBERON:0002020,2.82e-09,34;UBERON:0001016,5.12e-09,75;UBERON:0002619,1.20e-08,17;UBERON:0001948,4.35e-08,5;UBERON:0002315,4.35e-08,5;UBERON:0000956,4.74e-07,21;UBERON:0001869,4.74e-07,21;UBERON:0000203,4.74e-07,21;UBERON:0004121,5.42e-07,95;UBERON:0000924,5.42e-07,95;UBERON:0006601,5.42e-07,95;UBERON:0002240,6.99e-07,6;UBERON:0005174,6.99e-07,6;UBERON:0001137,6.99e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,0,0,0,0.0958454710182364,0,1.10115880999389,1.27687338085188,1.38245879930619,0.395658863190582,0.0914876436024097,0.52091337055676,0.279182999001381,0,0.45839474333043,2.35702868378934,1.28134512719193,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299581278809645,0,0.376963056338593,0.347648640384553,0,0,0.162241263067758,0.101839363850316,0,0,0,0,0,0,0,0,0.2562274405697,0,0,0.215567992932842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0.233530684734339,0,0.164167464079095,0.162137619091711,0.146199987425332,0,0,0,0.514523061896422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0.140271639780637,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0.648540907100142,0,1.43768206527355,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0.476087281772027,0.585400943573396,0.315270288212382,0.221464689648775,0.159454768657487,0,0.172684981865896,0,0,0,0,0,0.481651769963376,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247960367176008,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,1.12950368523413,0.460325236507177,1.14579102687879,3.43706364687375,0,0.755393897389701,0,0.900642406448441,0,2.07104124700728,0,0,0,0.243106717068294,0,0,0,0,0.320919209591815,0,0.25347929989024,0,0.280924522409647,0.0640251524048693,0.17230640686684,0,0.231768651889711,0.192909220463705,0,0.147198920134397,0.342869252385415,0.177475806159338,0,0,0.0941093804153306,0.0846146078916765,0.182927972872773,0.263069711437843,0.135804113845862,0,0,0.197008964751127,0,0,0,0.249810577937946,0.233931608445408,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,0,0,0,0.0958454710182364,0,1.10115880999389,1.27687338085188,1.38245879930619,0.395658863190582,0.0914876436024097,0.52091337055676,0.279182999001381,0,0.45839474333043,2.35702868378934,1.28134512719193,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299581278809645,0,0.376963056338593,0.347648640384553,0,0,0.162241263067758,0.101839363850316,0,0,0,0,0,0,0,0,0.2562274405697,0,0,0.215567992932842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0.233530684734339,0,0.164167464079095,0.162137619091711,0.146199987425332,0,0,0,0.514523061896422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0.140271639780637,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0.648540907100142,0,1.43768206527355,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0.476087281772027,0.585400943573396,0.315270288212382,0.221464689648775,0.159454768657487,0,0.172684981865896,0,0,0,0,0,0.481651769963376,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247960367176008,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,1.12950368523413,0.460325236507177,1.14579102687879,3.43706364687375,0,0.755393897389701,0,0.900642406448441,0,2.07104124700728,0,0,0,0.243106717068294,0,0,0,0,0.320919209591815,0,0.25347929989024,0,0.280924522409647,0.0640251524048693,0.17230640686684,0,0.231768651889711,0.192909220463705,0,0.147198920134397,0.342869252385415,0.177475806159338,0,0,0.0941093804153306,0.0846146078916765,0.182927972872773,0.263069711437843,0.135804113845862,0,0,0.197008964751127,0,0,0,0.249810577937946,0.233931608445408,0,0,0,0 | ||
|short_description=p14@uc009bfw.1 | |short_description=p14@uc009bfw.1 | ||
}} | }} |
Latest revision as of 13:50, 5 August 2015
Short description: | p14@uc009bfw.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_14_at_uc009bfw.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:145 |
Association with transcript: | 381bp_to_uc009bfw.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 1.91e-26 | 3 |
neuron of the ventral spinal cord | 7.25e-13 | 3 |
CNS neuron (sensu Vertebrata) | 1.27e-09 | 23 |
neuroblast (sensu Vertebrata) | 1.27e-09 | 23 |
Ontology term | p-value | n |
---|---|---|
raphe nuclei | 1.91e-26 | 3 |
reticular formation | 1.91e-26 | 3 |
occipital lobe | 1.84e-14 | 10 |
visual cortex | 1.84e-14 | 10 |
neocortex | 1.84e-14 | 10 |
ventral horn of spinal cord | 7.25e-13 | 3 |
regional part of nervous system | 1.01e-12 | 54 |
central nervous system | 2.80e-09 | 73 |
gray matter | 2.82e-09 | 34 |
nervous system | 5.12e-09 | 75 |
regional part of cerebral cortex | 1.20e-08 | 17 |
regional part of spinal cord | 4.35e-08 | 5 |
gray matter of spinal cord | 4.35e-08 | 5 |
cerebral cortex | 4.74e-07 | 21 |
cerebral hemisphere | 4.74e-07 | 21 |
pallium | 4.74e-07 | 21 |
ectoderm-derived structure | 5.42e-07 | 95 |
ectoderm | 5.42e-07 | 95 |
presumptive ectoderm | 5.42e-07 | 95 |
spinal cord | 6.99e-07 | 6 |
dorsal region element | 6.99e-07 | 6 |
dorsum | 6.99e-07 | 6 |