FFCP PHASE1:Mm9::chr6:30756217..30756237,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=145|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:30756217..30756237,+|id=chr6:30756217..30756237,+|ontology_enrichment_celltype=CL:0000117!8.68e-09!23;CL:0000337!8.68e-09!23|ontology_enrichment_celltype_v019_2=CL:0000117,2.87e-07,23;CL:0000337,2.87e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.08e-14!52;UBERON:0005068!1.08e-14!52;UBERON:0006241!1.08e-14!52;UBERON:0007135!1.08e-14!52;UBERON:0002346!5.83e-14!71;UBERON:0003075!5.83e-14!71;UBERON:0007284!5.83e-14!71;UBERON:0000955!9.43e-14!50;UBERON:0006238!9.43e-14!50;UBERON:0002616!1.02e-13!49;UBERON:0000033!1.90e-13!63;UBERON:0002020!3.62e-13!34;UBERON:0000025!1.38e-12!114;UBERON:0003056!1.41e-12!49;UBERON:0003080!2.54e-11!40;UBERON:0002791!6.64e-11!29;UBERON:0003528!6.64e-11!29;UBERON:0001893!6.64e-11!29;UBERON:0002780!9.11e-11!39;UBERON:0001890!9.11e-11!39;UBERON:0006240!9.11e-11!39;UBERON:0004111!3.19e-10!122;UBERON:0001017!9.29e-10!73;UBERON:0005743!9.29e-10!73;UBERON:0004121!3.97e-09!102;UBERON:0000924!3.97e-09!102;UBERON:0006601!3.97e-09!102;UBERON:0000073!6.37e-09!75;UBERON:0001016!6.37e-09!75;UBERON:0002021!3.65e-08!10;UBERON:0000411!3.65e-08!10;UBERON:0001950!3.65e-08!10;UBERON:0000956!3.66e-07!21;UBERON:0001869!3.66e-07!21;UBERON:0000203!3.66e-07!21;UBERON:0000468!3.93e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.43e-15,54;UBERON:0001049,5.98e-14,52;UBERON:0005068,5.98e-14,52;UBERON:0006241,5.98e-14,52;UBERON:0007135,5.98e-14,52;UBERON:0002020,2.19e-13,34;UBERON:0002346,4.78e-13,64;UBERON:0003075,4.78e-13,64;UBERON:0007284,4.78e-13,64;UBERON:0003528,2.79e-11,29;UBERON:0002791,2.79e-11,29;UBERON:0001893,2.79e-11,29;UBERON:0002616,2.90e-11,46;UBERON:0001017,4.09e-11,73;UBERON:0000955,8.48e-11,47;UBERON:0006238,8.48e-11,47;UBERON:0000025,1.61e-10,114;UBERON:0002021,1.64e-10,10;UBERON:0000411,1.64e-10,10;UBERON:0001950,1.64e-10,10;UBERON:0001016,1.89e-10,75;UBERON:0010314,2.34e-10,92;UBERON:0003056,2.79e-10,49;UBERON:0003080,7.36e-10,40;UBERON:0010371,9.02e-10,73;UBERON:0002780,3.24e-09,39;UBERON:0001890,3.24e-09,39;UBERON:0006240,3.24e-09,39;UBERON:0004111,1.08e-08,122;UBERON:0004121,3.01e-08,95;UBERON:0000924,3.01e-08,95;UBERON:0006601,3.01e-08,95;UBERON:0002619,5.64e-07,17|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42779753031517,2.64495489636016,1.90149421051854,0,0,0,0,0,0,0,1.03689612308478,0.405017814995072,0.841299845405528,0.856952953211411,1.54607978666129,0.489963196859816,0.383381884072945,0.919218786610021,7.70811166995721,5.49055553766307,9.83081812839958,2.2420668914133,4.20843160571084,5.2091337055676,1.11673199600552,2.25105044012672,10.5430790965999,19.1508580557884,15.233769845504,4.28718725398191,0,0,0,0,0,0,0,0.448026887097336,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,1.21786191324856,0.230615497256059,1.65794904607885,2.93971767839262,0.125666591329675,0.741584903203122,0,0,1.13236794963186,0.441683036920787,0.484875253135222,0,3.22058876712702,2.72280718857492,0,0,0,0,5.84183493678809,5.49000723382352,10.3036568732549,4.17178368461463,8.69432554923124,5.61027720310812,6.97637431191358,2.24046600470696,0.373220911830279,0,0.210441855886474,0.260240885925407,0.229902104433473,0.360124259610698,4.52114453507145,1.42876648217788,3.20284300712124,1.12442069471675,3.10444044886819,0,0,0,0.219195732427575,1.39023624612799,0.348252166522167,0.61734640922383,0,0,0,0,0,0.234526059981096,0.180062061461015,0.23674473558521,0.787056926989615,3.08534225774756,3.72054311600653,0.804820204198858,2.56883753207773,1.48103864922132,6.07419617092652,1.29710095273369,0.584799949701329,0.878200461164203,0.671032093801859,1.68231958851302,10.8049842998249,0,0,0,0.232236671860439,0.128867461322093,0,0.444756087689741,0,0,0.494096864172033,0.251335208800269,0.397912944082302,0,0,0.432276099749388,0,0,0.228497025219458,0,1.62921062276251,1.16371492300575,1.75339549725796,1.07502113111237,1.77132177575523,0.156998727841375,0,0,0,0,0,0.202860121388503,0,0,0,5.18832725680113,1.09824565275233,17.2521847832825,1.48856379067401,2.18426371180192,1.01031551178845,0.358794827043824,2.41221760681684,0.369506380333209,0,0.162964976442026,0.678980343100753,2.34690248288502,0.670025029767263,3.09456733151818,8.00047956216975,4.57141917907954,9.52298165489732,4.14582398509466,2.13022309130459,2.41758974612254,0.867894351489069,0,0,0,0,4.17431533968259,7.3843362553088,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0.642642632843614,0,0.178065603667255,1.30309567482861,0.164970122972535,0,0,0,0.188605079755898,0,0.307435147943927,0.258428293168221,2.54473610634254,1.42598951353889,0.632073515871632,0,0,1.70219802876894,0.900305470156551,0,0,0.709360934569094,0.535106452806212,0.493647061806363,0.304464949114599,0.23467170806371,0.63549621259146,0,0,0.645857706783622,0.422190474497091,0.238744688006273,0.328281799490123,0,3.8939313422207,0,0.82554747185289,0.185194527369712,0.188368457004691,0,0,0,0,0,0,0.316335993581135,0,0.756037385752609,0.418176592028937,0.655087691238533,1.34864346384821,0.826534557253359,0,0.259229946583586,0,0,0.149516546043979,0,0.777804753376191,0,1.68956125490778,1.05621514781179,1.0416350787516,0,0.241584120826006,0,0,0,0.308132871494482,0.389762468933385,0,0.198681354781265,0.240390899039938,0.147689527174577,0,0,0.201652370273681,0.0974578807397524,0,0,0.226730383615211,0,0,0,0,0.187682475451182,0,0,0,18.6368108063632,9.20650473014354,20.6242384838183,15.2949332285882,3.42541259885321,9.82012066606611,10.8003600037089,6.30449684513909,7.25027854374727,8.28416498802912,0.415149390336707,1.99512436700516,1.02440163452481,0.729320151204882,1.25767897576789,0.367687016900028,2.44471400581777,1.64828045791115,1.28367683836726,1.01078884705519,1.52087579934144,1.69763707247469,2.90288673156635,1.34452820050225,1.26358031702349,1.42888107384922,1.50649623728312,2.12200142510076,1.64834360321323,1.61918812147837,3.08582327146874,6.74408063405482,2.38436189947321,2.76158191601424,1.2234219453993,3.21535509988371,3.47563148458268,4.47218509444333,2.17286582153379,3.36685362994643,1.42362021749009,4.23569274214923,2.45538625901814,1.54936841185966,0.578719832943424,1.74867404556562,1.63752125911786,0.429742108096597,1.72159498861959,0.661774257358546,0.231867835620421|short_description=p@chr6:30756217..30756237,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=145 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr6:30756217..30756237,+ | |||
|description=CAGE_peak_at_chr6:30756217..30756237,+ | |||
|id=chr6:30756217..30756237,+ | |||
|ontology_enrichment_celltype=CL:0000117!8.68e-09!23;CL:0000337!8.68e-09!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.87e-07,23;CL:0000337,2.87e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.08e-14!52;UBERON:0005068!1.08e-14!52;UBERON:0006241!1.08e-14!52;UBERON:0007135!1.08e-14!52;UBERON:0002346!5.83e-14!71;UBERON:0003075!5.83e-14!71;UBERON:0007284!5.83e-14!71;UBERON:0000955!9.43e-14!50;UBERON:0006238!9.43e-14!50;UBERON:0002616!1.02e-13!49;UBERON:0000033!1.90e-13!63;UBERON:0002020!3.62e-13!34;UBERON:0000025!1.38e-12!114;UBERON:0003056!1.41e-12!49;UBERON:0003080!2.54e-11!40;UBERON:0002791!6.64e-11!29;UBERON:0003528!6.64e-11!29;UBERON:0001893!6.64e-11!29;UBERON:0002780!9.11e-11!39;UBERON:0001890!9.11e-11!39;UBERON:0006240!9.11e-11!39;UBERON:0004111!3.19e-10!122;UBERON:0001017!9.29e-10!73;UBERON:0005743!9.29e-10!73;UBERON:0004121!3.97e-09!102;UBERON:0000924!3.97e-09!102;UBERON:0006601!3.97e-09!102;UBERON:0000073!6.37e-09!75;UBERON:0001016!6.37e-09!75;UBERON:0002021!3.65e-08!10;UBERON:0000411!3.65e-08!10;UBERON:0001950!3.65e-08!10;UBERON:0000956!3.66e-07!21;UBERON:0001869!3.66e-07!21;UBERON:0000203!3.66e-07!21;UBERON:0000468!3.93e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.43e-15,54;UBERON:0001049,5.98e-14,52;UBERON:0005068,5.98e-14,52;UBERON:0006241,5.98e-14,52;UBERON:0007135,5.98e-14,52;UBERON:0002020,2.19e-13,34;UBERON:0002346,4.78e-13,64;UBERON:0003075,4.78e-13,64;UBERON:0007284,4.78e-13,64;UBERON:0003528,2.79e-11,29;UBERON:0002791,2.79e-11,29;UBERON:0001893,2.79e-11,29;UBERON:0002616,2.90e-11,46;UBERON:0001017,4.09e-11,73;UBERON:0000955,8.48e-11,47;UBERON:0006238,8.48e-11,47;UBERON:0000025,1.61e-10,114;UBERON:0002021,1.64e-10,10;UBERON:0000411,1.64e-10,10;UBERON:0001950,1.64e-10,10;UBERON:0001016,1.89e-10,75;UBERON:0010314,2.34e-10,92;UBERON:0003056,2.79e-10,49;UBERON:0003080,7.36e-10,40;UBERON:0010371,9.02e-10,73;UBERON:0002780,3.24e-09,39;UBERON:0001890,3.24e-09,39;UBERON:0006240,3.24e-09,39;UBERON:0004111,1.08e-08,122;UBERON:0004121,3.01e-08,95;UBERON:0000924,3.01e-08,95;UBERON:0006601,3.01e-08,95;UBERON:0002619,5.64e-07,17 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42779753031517,2.64495489636016,1.90149421051854,0,0,0,0,0,0,0,1.03689612308478,0.405017814995072,0.841299845405528,0.856952953211411,1.54607978666129,0.489963196859816,0.383381884072945,0.919218786610021,7.70811166995721,5.49055553766307,9.83081812839958,2.2420668914133,4.20843160571084,5.2091337055676,1.11673199600552,2.25105044012672,10.5430790965999,19.1508580557884,15.233769845504,4.28718725398191,0,0,0,0,0,0,0,0.448026887097336,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,1.21786191324856,0.230615497256059,1.65794904607885,2.93971767839262,0.125666591329675,0.741584903203122,0,0,1.13236794963186,0.441683036920787,0.484875253135222,0,3.22058876712702,2.72280718857492,0,0,0,0,5.84183493678809,5.49000723382352,10.3036568732549,4.17178368461463,8.69432554923124,5.61027720310812,6.97637431191358,2.24046600470696,0.373220911830279,0,0.210441855886474,0.260240885925407,0.229902104433473,0.360124259610698,4.52114453507145,1.42876648217788,3.20284300712124,1.12442069471675,3.10444044886819,0,0,0,0.219195732427575,1.39023624612799,0.348252166522167,0.61734640922383,0,0,0,0,0,0.234526059981096,0.180062061461015,0.23674473558521,0.787056926989615,3.08534225774756,3.72054311600653,0.804820204198858,2.56883753207773,1.48103864922132,6.07419617092652,1.29710095273369,0.584799949701329,0.878200461164203,0.671032093801859,1.68231958851302,10.8049842998249,0,0,0,0.232236671860439,0.128867461322093,0,0.444756087689741,0,0,0.494096864172033,0.251335208800269,0.397912944082302,0,0,0.432276099749388,0,0,0.228497025219458,0,1.62921062276251,1.16371492300575,1.75339549725796,1.07502113111237,1.77132177575523,0.156998727841375,0,0,0,0,0,0.202860121388503,0,0,0,5.18832725680113,1.09824565275233,17.2521847832825,1.48856379067401,2.18426371180192,1.01031551178845,0.358794827043824,2.41221760681684,0.369506380333209,0,0.162964976442026,0.678980343100753,2.34690248288502,0.670025029767263,3.09456733151818,8.00047956216975,4.57141917907954,9.52298165489732,4.14582398509466,2.13022309130459,2.41758974612254,0.867894351489069,0,0,0,0,4.17431533968259,7.3843362553088,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0.642642632843614,0,0.178065603667255,1.30309567482861,0.164970122972535,0,0,0,0.188605079755898,0,0.307435147943927,0.258428293168221,2.54473610634254,1.42598951353889,0.632073515871632,0,0,1.70219802876894,0.900305470156551,0,0,0.709360934569094,0.535106452806212,0.493647061806363,0.304464949114599,0.23467170806371,0.63549621259146,0,0,0.645857706783622,0.422190474497091,0.238744688006273,0.328281799490123,0,3.8939313422207,0,0.82554747185289,0.185194527369712,0.188368457004691,0,0,0,0,0,0,0.316335993581135,0,0.756037385752609,0.418176592028937,0.655087691238533,1.34864346384821,0.826534557253359,0,0.259229946583586,0,0,0.149516546043979,0,0.777804753376191,0,1.68956125490778,1.05621514781179,1.0416350787516,0,0.241584120826006,0,0,0,0.308132871494482,0.389762468933385,0,0.198681354781265,0.240390899039938,0.147689527174577,0,0,0.201652370273681,0.0974578807397524,0,0,0.226730383615211,0,0,0,0,0.187682475451182,0,0,0,18.6368108063632,9.20650473014354,20.6242384838183,15.2949332285882,3.42541259885321,9.82012066606611,10.8003600037089,6.30449684513909,7.25027854374727,8.28416498802912,0.415149390336707,1.99512436700516,1.02440163452481,0.729320151204882,1.25767897576789,0.367687016900028,2.44471400581777,1.64828045791115,1.28367683836726,1.01078884705519,1.52087579934144,1.69763707247469,2.90288673156635,1.34452820050225,1.26358031702349,1.42888107384922,1.50649623728312,2.12200142510076,1.64834360321323,1.61918812147837,3.08582327146874,6.74408063405482,2.38436189947321,2.76158191601424,1.2234219453993,3.21535509988371,3.47563148458268,4.47218509444333,2.17286582153379,3.36685362994643,1.42362021749009,4.23569274214923,2.45538625901814,1.54936841185966,0.578719832943424,1.74867404556562,1.63752125911786,0.429742108096597,1.72159498861959,0.661774257358546,0.231867835620421 | |||
|short_description=p@chr6:30756217..30756237,+ | |||
}} |
Latest revision as of 13:53, 5 August 2015
Short description: | p@chr6:30756217..30756237, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:30756217..30756237, + |
Coexpression cluster: | MCL_coexpression_mm9:145 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.87e-07 | 23 |
neuroblast (sensu Vertebrata) | 2.87e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 1.43e-15 | 54 |
neural tube | 5.98e-14 | 52 |
neural rod | 5.98e-14 | 52 |
future spinal cord | 5.98e-14 | 52 |
neural keel | 5.98e-14 | 52 |
gray matter | 2.19e-13 | 34 |
neurectoderm | 4.78e-13 | 64 |
neural plate | 4.78e-13 | 64 |
presumptive neural plate | 4.78e-13 | 64 |
brain grey matter | 2.79e-11 | 29 |
regional part of telencephalon | 2.79e-11 | 29 |
telencephalon | 2.79e-11 | 29 |
regional part of brain | 2.90e-11 | 46 |
central nervous system | 4.09e-11 | 73 |
brain | 8.48e-11 | 47 |
future brain | 8.48e-11 | 47 |
tube | 1.61e-10 | 114 |
occipital lobe | 1.64e-10 | 10 |
visual cortex | 1.64e-10 | 10 |
neocortex | 1.64e-10 | 10 |
nervous system | 1.89e-10 | 75 |
structure with developmental contribution from neural crest | 2.34e-10 | 92 |
pre-chordal neural plate | 2.79e-10 | 49 |
anterior neural tube | 7.36e-10 | 40 |
ecto-epithelium | 9.02e-10 | 73 |
regional part of forebrain | 3.24e-09 | 39 |
forebrain | 3.24e-09 | 39 |
future forebrain | 3.24e-09 | 39 |
anatomical conduit | 1.08e-08 | 122 |
ectoderm-derived structure | 3.01e-08 | 95 |
ectoderm | 3.01e-08 | 95 |
presumptive ectoderm | 3.01e-08 | 95 |
regional part of cerebral cortex | 5.64e-07 | 17 |