Personal tools

FFCP PHASE1:Mm9::chr6:30756310..30756328,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |id=chr6:30756310..30756328,+ |short_description=p@chr6:30756310..30756328,+ |description=CAGE_peak_at_chr6:30756310..30756328,+ |association_with_transcript=NA |E...")
 
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr6:30756310..30756328,+
|DHSsupport=NA
|short_description=p@chr6:30756310..30756328,+
|DPIdataset=NA
|description=CAGE_peak_at_chr6:30756310..30756328,+
|association_with_transcript=NA
|EntrezGene=NA
|EntrezGene=NA
|HGNC=
|HGNC=
|MCL_coexpression_id=145
|TSSclassifier=NA
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|cluster_id=chr6:30756310..30756328,+
|description=CAGE_peak_at_chr6:30756310..30756328,+
|id=chr6:30756310..30756328,+
|ontology_enrichment_celltype=CL:0000117!8.14e-09!23;CL:0000337!8.14e-09!23
|ontology_enrichment_celltype_v019_2=CL:0000117,4.31e-09,23;CL:0000337,4.31e-09,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!2.86e-14!52;UBERON:0005068!2.86e-14!52;UBERON:0006241!2.86e-14!52;UBERON:0007135!2.86e-14!52;UBERON:0000955!7.80e-14!50;UBERON:0006238!7.80e-14!50;UBERON:0002346!1.46e-13!71;UBERON:0003075!1.46e-13!71;UBERON:0007284!1.46e-13!71;UBERON:0002616!1.72e-13!49;UBERON:0002020!3.10e-13!34;UBERON:0000033!3.32e-12!63;UBERON:0003056!3.70e-12!49;UBERON:0000025!7.99e-12!114;UBERON:0003080!1.06e-11!40;UBERON:0002791!2.47e-11!29;UBERON:0003528!2.47e-11!29;UBERON:0001893!2.47e-11!29;UBERON:0002780!3.48e-11!39;UBERON:0001890!3.48e-11!39;UBERON:0006240!3.48e-11!39;UBERON:0001017!7.05e-11!73;UBERON:0005743!7.05e-11!73;UBERON:0000073!6.42e-10!75;UBERON:0001016!6.42e-10!75;UBERON:0004121!1.12e-09!102;UBERON:0000924!1.12e-09!102;UBERON:0006601!1.12e-09!102;UBERON:0004111!4.50e-09!122;UBERON:0002021!1.88e-08!10;UBERON:0000411!1.88e-08!10;UBERON:0001950!1.88e-08!10;UBERON:0000468!3.59e-08!333;UBERON:0000956!2.25e-07!21;UBERON:0001869!2.25e-07!21;UBERON:0000203!2.25e-07!21;UBERON:0002619!3.92e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.09e-18,54;UBERON:0001049,2.53e-16,52;UBERON:0005068,2.53e-16,52;UBERON:0006241,2.53e-16,52;UBERON:0007135,2.53e-16,52;UBERON:0002020,2.82e-15,34;UBERON:0000955,3.02e-14,47;UBERON:0006238,3.02e-14,47;UBERON:0002346,5.33e-14,64;UBERON:0003075,5.33e-14,64;UBERON:0007284,5.33e-14,64;UBERON:0002616,7.97e-14,46;UBERON:0003528,1.55e-13,29;UBERON:0002791,1.55e-13,29;UBERON:0001893,1.55e-13,29;UBERON:0001017,2.68e-13,73;UBERON:0003080,4.60e-13,40;UBERON:0001016,1.72e-12,75;UBERON:0002780,2.02e-12,39;UBERON:0001890,2.02e-12,39;UBERON:0006240,2.02e-12,39;UBERON:0003056,3.63e-12,49;UBERON:0010314,7.54e-12,92;UBERON:0000025,1.67e-11,114;UBERON:0010371,5.75e-11,73;UBERON:0002021,2.02e-10,10;UBERON:0000411,2.02e-10,10;UBERON:0001950,2.02e-10,10;UBERON:0004121,5.50e-10,95;UBERON:0000924,5.50e-10,95;UBERON:0006601,5.50e-10,95;UBERON:0004111,2.04e-09,122;UBERON:0002619,2.16e-09,17;UBERON:0000956,1.63e-08,21;UBERON:0001869,1.63e-08,21;UBERON:0000203,1.63e-08,21
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,4.04632921719196,4.23192783417626,3.80298842103708,0,0,0,0,0,0,0,1.03689612308478,0.405017814995072,0.630974884054146,1.42825492201902,0.662605622854841,1.10241719293459,1.15014565221884,1.83843757322004,6.60695285996332,11.1087984134113,15.0534402591119,4.08847491963601,9.60620257825301,10.939180781692,1.95428099300967,3.37657566019008,17.5717984943332,44.4889164065238,22.067610523861,8.57437450796383,0,0,0.869593466105033,0.860423876981386,0,0,0.649776417447669,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0,0.173485326766136,2.13125834818499,0.230615497256059,1.95939432718409,3.17489509266403,0.125666591329675,1.48316980640624,0,0,2.42650274921114,0.220841518460394,1.93950101254089,0,2.34224637609238,1.67557365450764,0,0,0,0,8.23848516726525,10.5225138648284,12.5654352112864,10.2556348913443,10.4843337505436,11.2205544062162,10.8701646255398,1.52759045775474,0.124406970610093,0,0.631325567659422,0.260240885925407,0,0.360124259610698,3.91832526372859,2.85753296435577,3.33095672740609,0.749613796477831,3.3631438196072,0,0.378212160335639,0.175951124163949,0.219195732427575,0.834141747676794,1.0447564995665,0.61734640922383,0,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0,1.57411385397923,3.85667782218446,3.95307706075693,0.268273401399619,2.10177616260905,1.31647879930784,5.58169377868924,1.86458261955468,0.877199924551994,1.09775057645525,1.34206418760372,2.52347938276953,17.6995933292369,0,0,0,0.232236671860439,0.128867461322093,0,0.22237804384487,0.190225626112559,0,0.988193728344065,1.50801125280162,1.79060824837036,0.58489226135736,0,0,0,0.189667900953082,0.799739588268102,1.1270773567308,3.05476991767971,1.55161989734101,3.22624771495465,1.89709611372772,1.18088118383682,0.627994911365499,0.370191491765402,0,0.166845105716094,0,0,0,0.241177159752417,0,0.287696137450811,4.53978634970099,1.64736847912849,35.9420516318386,2.23284568601102,2.18426371180192,1.01031551178845,0.538192240565737,0.482443521363367,0.369506380333209,0,0.325929952884052,0.848725428875941,1.40814148973101,0.670025029767263,3.33261097240419,10.9274842800367,7.40885177299098,12.1805579306826,5.42146213435456,4.42430949732493,2.93564469172023,1.88043776155965,0,0,0,0.551873492609465,7.86697890940181,10.6662634798905,0,0.504941854408746,0,0.390438744296638,0.215423397732799,0,0.222798674082394,0,0,0.292255857911312,0,2.57057053137446,0.141940085208269,0.534196811001766,1.14020871547503,0,0,0.485561272309963,0,0.943025398779491,0,0.307435147943927,1.03371317267288,1.81766864738753,1.06949213515416,0.316036757935816,0,1.03135543248187,2.7235168460303,0.540183282093931,0.129358683782755,0.214337035031592,0.177340233642274,1.96205699362278,1.48094118541909,0,0.938686832254841,0.21183207086382,0,0.16488625294148,1.77610869365496,0.904693873922338,0.119372344003136,0.492422699235184,0.291480836629851,7.97328798645192,0,0.619160603889667,0.370389054739423,0.188368457004691,0,0,0,0,0,0,0,0.203319467126849,0.648032044930808,0.836353184057875,0.218362563746178,1.07891477107857,0.909188012978695,0,0,0,0,0,0,0.388902376688095,0.129159823477731,1.35164900392623,1.5256441023948,0.781226309063701,0.104859344425711,0.241584120826006,0.576060012515731,0,0,0.205421914329655,0.129920822977795,0,0,0.240390899039938,0.443068581523732,0.302899349844443,0.15241361331,0.201652370273681,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,63.2522063731115,33.6037422650239,37.8111038870002,31.1054260042075,14.3867329151835,29.4603619981983,26.3258775090404,19.3638117386415,24.9228324941313,34.6899408873719,0.518936737920883,1.59609949360412,0.682934423016537,1.94485373654635,1.46729213839588,0.183843508450014,0.666740183404846,2.88449080134452,3.20919209591815,1.76888048234658,2.78827229879264,1.69763707247469,4.40115085108447,1.15245274328765,1.49332219284595,1.90517476513229,2.54945517078682,3.08654752741928,4.12085900803307,2.94397840268795,6.17164654293748,7.63145966485151,3.57654284920981,1.45346416632329,2.1645157495526,2.96151127620868,4.39027134894654,9.47050961176234,3.39510284614654,8.97827634652382,2.13543032623513,5.02372860115374,5.32000356120596,1.23949472948773,1.15743966588685,1.99848462350357,1.63752125911786,2.57845264857958,2.48674831689496,1.10295709559758,0.695603506861264
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,4.04632921719196,4.23192783417626,3.80298842103708,0,0,0,0,0,0,0,1.03689612308478,0.405017814995072,0.630974884054146,1.42825492201902,0.662605622854841,1.10241719293459,1.15014565221884,1.83843757322004,6.60695285996332,11.1087984134113,15.0534402591119,4.08847491963601,9.60620257825301,10.939180781692,1.95428099300967,3.37657566019008,17.5717984943332,44.4889164065238,22.067610523861,8.57437450796383,0,0,0.869593466105033,0.860423876981386,0,0,0.649776417447669,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0,0.173485326766136,2.13125834818499,0.230615497256059,1.95939432718409,3.17489509266403,0.125666591329675,1.48316980640624,0,0,2.42650274921114,0.220841518460394,1.93950101254089,0,2.34224637609238,1.67557365450764,0,0,0,0,8.23848516726525,10.5225138648284,12.5654352112864,10.2556348913443,10.4843337505436,11.2205544062162,10.8701646255398,1.52759045775474,0.124406970610093,0,0.631325567659422,0.260240885925407,0,0.360124259610698,3.91832526372859,2.85753296435577,3.33095672740609,0.749613796477831,3.3631438196072,0,0.378212160335639,0.175951124163949,0.219195732427575,0.834141747676794,1.0447564995665,0.61734640922383,0,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0,1.57411385397923,3.85667782218446,3.95307706075693,0.268273401399619,2.10177616260905,1.31647879930784,5.58169377868924,1.86458261955468,0.877199924551994,1.09775057645525,1.34206418760372,2.52347938276953,17.6995933292369,0,0,0,0.232236671860439,0.128867461322093,0,0.22237804384487,0.190225626112559,0,0.988193728344065,1.50801125280162,1.79060824837036,0.58489226135736,0,0,0,0.189667900953082,0.799739588268102,1.1270773567308,3.05476991767971,1.55161989734101,3.22624771495465,1.89709611372772,1.18088118383682,0.627994911365499,0.370191491765402,0,0.166845105716094,0,0,0,0.241177159752417,0,0.287696137450811,4.53978634970099,1.64736847912849,35.9420516318386,2.23284568601102,2.18426371180192,1.01031551178845,0.538192240565737,0.482443521363367,0.369506380333209,0,0.325929952884052,0.848725428875941,1.40814148973101,0.670025029767263,3.33261097240419,10.9274842800367,7.40885177299098,12.1805579306826,5.42146213435456,4.42430949732493,2.93564469172023,1.88043776155965,0,0,0,0.551873492609465,7.86697890940181,10.6662634798905,0,0.504941854408746,0,0.390438744296638,0.215423397732799,0,0.222798674082394,0,0,0.292255857911312,0,2.57057053137446,0.141940085208269,0.534196811001766,1.14020871547503,0,0,0.485561272309963,0,0.943025398779491,0,0.307435147943927,1.03371317267288,1.81766864738753,1.06949213515416,0.316036757935816,0,1.03135543248187,2.7235168460303,0.540183282093931,0.129358683782755,0.214337035031592,0.177340233642274,1.96205699362278,1.48094118541909,0,0.938686832254841,0.21183207086382,0,0.16488625294148,1.77610869365496,0.904693873922338,0.119372344003136,0.492422699235184,0.291480836629851,7.97328798645192,0,0.619160603889667,0.370389054739423,0.188368457004691,0,0,0,0,0,0,0,0.203319467126849,0.648032044930808,0.836353184057875,0.218362563746178,1.07891477107857,0.909188012978695,0,0,0,0,0,0,0.388902376688095,0.129159823477731,1.35164900392623,1.5256441023948,0.781226309063701,0.104859344425711,0.241584120826006,0.576060012515731,0,0,0.205421914329655,0.129920822977795,0,0,0.240390899039938,0.443068581523732,0.302899349844443,0.15241361331,0.201652370273681,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,63.2522063731115,33.6037422650239,37.8111038870002,31.1054260042075,14.3867329151835,29.4603619981983,26.3258775090404,19.3638117386415,24.9228324941313,34.6899408873719,0.518936737920883,1.59609949360412,0.682934423016537,1.94485373654635,1.46729213839588,0.183843508450014,0.666740183404846,2.88449080134452,3.20919209591815,1.76888048234658,2.78827229879264,1.69763707247469,4.40115085108447,1.15245274328765,1.49332219284595,1.90517476513229,2.54945517078682,3.08654752741928,4.12085900803307,2.94397840268795,6.17164654293748,7.63145966485151,3.57654284920981,1.45346416632329,2.1645157495526,2.96151127620868,4.39027134894654,9.47050961176234,3.39510284614654,8.97827634652382,2.13543032623513,5.02372860115374,5.32000356120596,1.23949472948773,1.15743966588685,1.99848462350357,1.63752125911786,2.57845264857958,2.48674831689496,1.10295709559758,0.695603506861264
|short_description=p@chr6:30756310..30756328,+
}}
}}

Latest revision as of 13:54, 5 August 2015

Short description:p@chr6:30756310..30756328, +
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr6:30756310..30756328, +
Coexpression cluster:MCL_coexpression_mm9:145
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p@chr6:30756310..30756328+

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.68
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C34.05
Mouse Granule cells, donor2.CNhs12357.11731-123E34.23
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.04
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.10
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.15
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F311.11
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D715.05
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D44.09
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F49.61
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D810.94
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.95
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I617.57
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D644.49
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F622.07
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E18.57
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D62.13
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F51.96
adrenal gland, neonate N00.CNhs11191.1311-23C13.17
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A81.48
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F52.43
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.34
cerebellum, neonate N30.CNhs11135.1395-42I21.68
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A48.24
corpus striatum, adult.CNhs10487.19-21D810.52
corpus striatum, neonate N00.CNhs11226.630-43F112.57
cortex, adult.CNhs10473.12-14D510.26
cortex, neonate N30.CNhs11107.1392-42F210.48
diencephalon, adult.CNhs10482.20-12F211.22
diencephalon, neonate N30.CNhs11201.1388-42B210.87
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.53
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D43.92
eyeball, neonate N00.CNhs11207.633-15C62.86
eyeball, neonate N01.CNhs11140.1532-43E73.33
eyeball, neonate N02.CNhs11205.1551-44G80.75
eyeball, neonate N16.CNhs11188.777-19A23.36
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C81.57
heart, embryo E16.CNhs11021.457-17C63.86
heart, embryo E17.CNhs11025.479-18E53.95
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E32.10
heart, neonate N03.CNhs11221.1349-25I21.32
heart, neonate N10.CNhs11118.749-24G15.58
heart, neonate N16.CNhs11209.782-15G11.86
heart, neonate N20.CNhs11127.821-26I60.88
heart, neonate N25.CNhs11196.1351-25D31.10
heart, neonate N30.CNhs11202.1390-42D21.34
hippocampus, adult.CNhs10478.13-16E82.52
hippocampus, neonate N00.CNhs11228.627-43G117.70
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.99
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F21.79
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.80
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I23.05
kidney, embryo E18.CNhs11001.1288-20C71.55
kidney, neonate N00.CNhs11214.646-21G73.23
kidney, neonate N10.CNhs11206.758-6D51.90
kidney, neonate N20.CNhs11113.832-19I11.18
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F44.54
liver, neonate N03.CNhs11123.1345-25G21.65
liver, neonate N06.CNhs11101.684-20A835.94
liver, neonate N07.CNhs11103.716-20H22.23
liver, neonate N10.CNhs11115.751-24B92.18
liver, neonate N20.CNhs11220.823-25A31.01
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.85
lung, embryo E16.CNhs10998.458-17B61.41
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I63.33
lung, neonate N00.CNhs11224.640-42C610.93
lung, neonate N06.CNhs11212.683-20E57.41
lung, neonate N07.CNhs11111.715-19A312.18
lung, neonate N10.CNhs11219.750-23E65.42
lung, neonate N20.CNhs11109.822-18A44.42
lung, neonate N25.CNhs11119.1359-25C72.94
lung, neonate N30.CNhs11133.1394-42H21.88
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C27.87
medulla oblongata, neonate N30.CNhs11200.1396-42A310.67
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I92.57
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I41.14
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D71.82
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G82.72
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F61.96
pituitary gland, embryo E17.CNhs11039.1265-44F51.48
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G41.78
skin, neonate N03.CNhs11215.662-22H30.90
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C97.97
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B81.08
stomach, neonate N07.CNhs11210.718-18A90.91
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G51.35
testis, neonate N00.CNhs11189.1300-22B71.53
testis, neonate N07.CNhs11222.726-26I40.78
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A163.25
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A233.60
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A337.81
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D731.11
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A414.39
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A529.46
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A626.33
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A719.36
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A824.92
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A934.69
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D21.94
whole body, embryo E14.CNhs10519.395-14B11.47
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.21
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.79
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.70
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.40
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.15
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.55
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.94
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G57.63
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.58
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.45
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.16
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.96
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.39
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G59.47
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.40
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G58.98
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.14
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.02
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.24
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I52.00
whole body, embryo E18.CNhs10516.493-3B31.64
whole body, neonate N00.CNhs10525.657-19C22.58
whole body, neonate N01.CNhs10576.659-23C62.49
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)4.31e-0923
neuroblast (sensu Vertebrata)4.31e-0923

Uber anatomy
Ontology termp-valuen
regional part of nervous system8.09e-1854
neural tube2.53e-1652
neural rod2.53e-1652
future spinal cord2.53e-1652
neural keel2.53e-1652
gray matter2.82e-1534
brain3.02e-1447
future brain3.02e-1447
neurectoderm5.33e-1464
neural plate5.33e-1464
presumptive neural plate5.33e-1464
regional part of brain7.97e-1446
brain grey matter1.55e-1329
regional part of telencephalon1.55e-1329
telencephalon1.55e-1329
central nervous system2.68e-1373
anterior neural tube4.60e-1340
nervous system1.72e-1275
regional part of forebrain2.02e-1239
forebrain2.02e-1239
future forebrain2.02e-1239
pre-chordal neural plate3.63e-1249
structure with developmental contribution from neural crest7.54e-1292
tube1.67e-11114
ecto-epithelium5.75e-1173
occipital lobe2.02e-1010
visual cortex2.02e-1010
neocortex2.02e-1010
ectoderm-derived structure5.50e-1095
ectoderm5.50e-1095
presumptive ectoderm5.50e-1095
anatomical conduit2.04e-09122
regional part of cerebral cortex2.16e-0917
cerebral cortex1.63e-0821
cerebral hemisphere1.63e-0821
pallium1.63e-0821
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr6:30756310..30756328,%2B&oldid=3906410"