FFCP PHASE1:Mm9::chr13:119521631..119521634,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=445 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:119521631..119521634,+ | |||
|description=CAGE_peak_at_chr13:119521631..119521634,+ | |description=CAGE_peak_at_chr13:119521631..119521634,+ | ||
|id=chr13:119521631..119521634,+ | |id=chr13:119521631..119521634,+ | ||
|ontology_enrichment_celltype=CL:0000192!3.67e-07!3;CL:0000359!3.67e-07!3;CL:0002539!3.67e-07!3;CL:0000514!3.67e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,5.61e-30,3;CL:0000359,5.61e-30,3;CL:0002539,5.61e-30,3;CL:0000514,5.61e-30,3;CL:0000680,8.02e-16,6;CL:0000187,8.02e-16,6;CL:0000056,8.02e-16,6;CL:0000222,8.67e-14,7;CL:0000355,4.56e-11,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001135!3.67e-07!3;UBERON:0004237!3.67e-07!3;UBERON:0004695!3.67e-07!3;UBERON:0002111!3.67e-07!3;UBERON:0004178!3.67e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,5.61e-30,3;UBERON:0004237,5.61e-30,3;UBERON:0004695,5.61e-30,3;UBERON:0002111,5.61e-30,3;UBERON:0004178,5.61e-30,3;UBERON:0000947,6.52e-23,4;UBERON:0001637,6.52e-23,4;UBERON:0004573,6.52e-23,4;UBERON:0003509,6.52e-23,4;UBERON:0004571,6.52e-23,4;UBERON:0010191,6.52e-23,4;UBERON:0004572,6.52e-23,4;UBERON:0000055,1.16e-18,5;UBERON:0007500,1.16e-18,5;UBERON:0001981,1.16e-18,5;UBERON:0002049,1.16e-18,5;UBERON:0007798,1.16e-18,5;UBERON:0004537,1.16e-18,5;UBERON:0006965,1.16e-18,5;UBERON:0001134,4.56e-11,9;UBERON:0002036,4.56e-11,9;UBERON:0002385,4.56e-11,9;UBERON:0000486,4.56e-11,9;UBERON:0007503,4.56e-11,9;UBERON:0001015,4.56e-11,9;UBERON:0002329,4.56e-11,9;UBERON:0003082,4.56e-11,9;UBERON:0003059,4.56e-11,9;UBERON:0007282,4.56e-11,9;UBERON:0004290,4.56e-11,9;UBERON:0009618,4.56e-11,9;UBERON:0000383,4.12e-10,10;UBERON:0007524,2.51e-09,11;UBERON:0003077,2.51e-09,11;UBERON:0007285,2.51e-09,11 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0.881277725829041,0.912392380975631,3.12029478674859,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0.151452386666368,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0.229902104433473,0.180062129805349,0.452114453507145,0,0,0,0,0.215567992932842,0,0.175951124163949,0.219195732427575,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0.38992817423824,0,0,0,0,0,0,0,0.193952487167626,0.0701358198903186,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509235257325564,0.469380496577004,0.502518772325447,0,0,0,0.8858587585951,0,0.655453258862952,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0,0.727067458955011,0,0.316036757935816,0,0,0,0.18006109403131,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0.209088296014469,0.218362563746178,0,0,0,0,0,0,0.149516546043979,0,0,0,0,0,0.13020438484395,0,0,0,0,0.202725215290164,0.205421914329655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0.252697211763798,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0.354951612318675,0,0.145346416632329,0,0.0846146078916765,0,0,0.135804113845862,0,0.118635018124174,0.394017929502254,0,0,0,0,0,0,0,0.220591419119515,0 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0.881277725829041,0.912392380975631,3.12029478674859,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0.151452386666368,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0.229902104433473,0.180062129805349,0.452114453507145,0,0,0,0,0.215567992932842,0,0.175951124163949,0.219195732427575,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0.38992817423824,0,0,0,0,0,0,0,0.193952487167626,0.0701358198903186,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509235257325564,0.469380496577004,0.502518772325447,0,0,0,0.8858587585951,0,0.655453258862952,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0,0.727067458955011,0,0.316036757935816,0,0,0,0.18006109403131,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0.209088296014469,0.218362563746178,0,0,0,0,0,0,0.149516546043979,0,0,0,0,0,0.13020438484395,0,0,0,0,0.202725215290164,0.205421914329655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0.252697211763798,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0.354951612318675,0,0.145346416632329,0,0.0846146078916765,0,0,0.135804113845862,0,0.118635018124174,0.394017929502254,0,0,0,0,0,0,0,0.220591419119515,0 | ||
|short_description=p@chr13:119521631..119521634,+ | |short_description=p@chr13:119521631..119521634,+ | ||
}} | }} |
Latest revision as of 15:58, 5 August 2015
Short description: | p@chr13:119521631..119521634, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:119521631..119521634, + |
Coexpression cluster: | MCL_coexpression_mm9:445 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 5.61e-30 | 3 |
vascular associated smooth muscle cell | 5.61e-30 | 3 |
aortic smooth muscle cell | 5.61e-30 | 3 |
smooth muscle myoblast | 5.61e-30 | 3 |
muscle precursor cell | 8.02e-16 | 6 |
muscle cell | 8.02e-16 | 6 |
myoblast | 8.02e-16 | 6 |
mesodermal cell | 8.67e-14 | 7 |
multi-potent skeletal muscle stem cell | 4.56e-11 | 9 |
Ontology term | p-value | n |
---|---|---|
smooth muscle tissue | 5.61e-30 | 3 |
blood vessel smooth muscle | 5.61e-30 | 3 |
arterial system smooth muscle | 5.61e-30 | 3 |
artery smooth muscle tissue | 5.61e-30 | 3 |
aorta smooth muscle tissue | 5.61e-30 | 3 |
aorta | 6.52e-23 | 4 |
artery | 6.52e-23 | 4 |
systemic artery | 6.52e-23 | 4 |
arterial blood vessel | 6.52e-23 | 4 |
systemic arterial system | 6.52e-23 | 4 |
aortic system | 6.52e-23 | 4 |
arterial system | 6.52e-23 | 4 |
vessel | 1.16e-18 | 5 |
epithelial tube open at both ends | 1.16e-18 | 5 |
blood vessel | 1.16e-18 | 5 |
vasculature | 1.16e-18 | 5 |
vascular system | 1.16e-18 | 5 |
blood vasculature | 1.16e-18 | 5 |
vascular cord | 1.16e-18 | 5 |
skeletal muscle tissue | 4.56e-11 | 9 |
striated muscle tissue | 4.56e-11 | 9 |
muscle tissue | 4.56e-11 | 9 |
multilaminar epithelium | 4.56e-11 | 9 |
epithelial vesicle | 4.56e-11 | 9 |
musculature | 4.56e-11 | 9 |
somite | 4.56e-11 | 9 |
myotome | 4.56e-11 | 9 |
presomitic mesoderm | 4.56e-11 | 9 |
presumptive segmental plate | 4.56e-11 | 9 |
dermomyotome | 4.56e-11 | 9 |
trunk paraxial mesoderm | 4.56e-11 | 9 |
musculature of body | 4.12e-10 | 10 |
dense mesenchyme tissue | 2.51e-09 | 11 |
paraxial mesoderm | 2.51e-09 | 11 |
presumptive paraxial mesoderm | 2.51e-09 | 11 |