FFCP PHASE1:Mm9::chr4:70195938..70196021,-: Difference between revisions
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{{FFCP|EntrezGene=230316|HGNC=|MCL_coexpression_id=552|UniProt=Q8BH27,Q0VGR4|association_with_transcript=0bp_to_ENSMUST00000107359,NM_172694,uc008tib.1_5end|description=CAGE_peak_1_at_Megf9_5end|id=chr4:70195938..70196021,-|ontology_enrichment_celltype=CL:0000540!1.63e-12!33;CL:0000047!1.63e-12!33;CL:0000031!1.63e-12!33;CL:0000404!1.63e-12!33;CL:0000221!8.78e-12!44;CL:0000133!8.78e-12!44;CL:0002319!2.83e-11!43;CL:0000117!1.70e-10!23;CL:0000337!1.70e-10!23;CL:0000393!7.46e-10!39;CL:0000211!7.46e-10!39;CL:0000055!3.41e-09!50|ontology_enrichment_celltype_v019_2=CL:0000540,1.63e-12,33;CL:0000047,1.63e-12,33;CL:0000031,1.63e-12,33;CL:0000404,1.63e-12,33;CL:0000221,8.78e-12,44;CL:0000133,8.78e-12,44;CL:0002319,2.83e-11,43;CL:0000117,1.70e-10,23;CL:0000337,1.70e-10,23;CL:0000393,7.45e-10,39;CL:0000211,7.45e-10,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!1.69e-23!102;UBERON:0000924!1.69e-23!102;UBERON:0006601!1.69e-23!102;UBERON:0000073!1.53e-21!75;UBERON:0001016!1.53e-21!75;UBERON:0001017!1.65e-20!73;UBERON:0005743!1.65e-20!73;UBERON:0000033!3.89e-18!63;UBERON:0002346!2.64e-17!71;UBERON:0003075!2.64e-17!71;UBERON:0007284!2.64e-17!71;UBERON:0002020!1.55e-16!34;UBERON:0001049!8.76e-16!52;UBERON:0005068!8.76e-16!52;UBERON:0006241!8.76e-16!52;UBERON:0007135!8.76e-16!52;UBERON:0000955!2.63e-15!50;UBERON:0006238!2.63e-15!50;UBERON:0002616!6.34e-15!49;UBERON:0003056!1.07e-14!49;UBERON:0002791!1.59e-14!29;UBERON:0003528!1.59e-14!29;UBERON:0001893!1.59e-14!29;UBERON:0003080!3.52e-12!40;UBERON:0002780!9.70e-12!39;UBERON:0001890!9.70e-12!39;UBERON:0006240!9.70e-12!39;UBERON:0000956!3.16e-11!21;UBERON:0001869!3.16e-11!21;UBERON:0000203!3.16e-11!21;UBERON:0002619!2.35e-09!17;UBERON:0004111!4.04e-09!122;UBERON:0000025!5.03e-09!114;UBERON:0000475!6.70e-09!200;UBERON:0007811!1.53e-07!86;UBERON:0000153!1.58e-07!94;UBERON:0002021!4.95e-07!10;UBERON:0000411!4.95e-07!10;UBERON:0001950!4.95e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.79e-25,95;UBERON:0000924,2.79e-25,95;UBERON:0006601,2.79e-25,95;UBERON:0001016,1.53e-21,75;UBERON:0010371,3.85e-21,73;UBERON:0001017,1.65e-20,73;UBERON:0002346,2.27e-19,64;UBERON:0003075,2.27e-19,64;UBERON:0007284,2.27e-19,64;UBERON:0000073,5.01e-17,54;UBERON:0002020,1.55e-16,34;UBERON:0001049,8.76e-16,52;UBERON:0005068,8.76e-16,52;UBERON:0006241,8.76e-16,52;UBERON:0007135,8.76e-16,52;UBERON:0003056,1.07e-14,49;UBERON:0003528,1.59e-14,29;UBERON:0002791,1.59e-14,29;UBERON:0001893,1.59e-14,29;UBERON:0000955,1.53e-13,47;UBERON:0006238,1.53e-13,47;UBERON:0002616,3.59e-13,46;UBERON:0003080,3.52e-12,40;UBERON:0010314,7.09e-12,92;UBERON:0002780,9.70e-12,39;UBERON:0001890,9.70e-12,39;UBERON:0006240,9.70e-12,39;UBERON:0000956,3.16e-11,21;UBERON:0001869,3.16e-11,21;UBERON:0000203,3.16e-11,21;UBERON:0002619,2.35e-09,17;UBERON:0004111,4.04e-09,122;UBERON:0000025,5.03e-09,114;UBERON:0002021,4.95e-07,10;UBERON:0000411,4.95e-07,10;UBERON:0001950,4.95e-07,10;UBERON:0000483,5.26e-07,174|phase1_expression=24.1824759128239,30.0118850569851,22.2949627300873,2.72217790176147,5.00895729946347,23.3352187957527,18.9226238882376,3.35720640948098,1.12630977721333,4.21316147379588,0.34243593645101,0.239316476986009,3.59521532855532,2.79745287740792,5.3297561890506,5.87178275430495,3.49780939064073,2.83915948822414,2.4680598049033,2.12194825899015,26.9587229778891,2.28369187762036,2.61199789138935,11.0394771727451,11.2410547722913,21.2465826722557,19.8150518233174,18.0995835456147,8.36103045608045,10.0812051903972,20.399206980288,5.71527606113668,3.07532393792285,0,2.88851619751275,1.32987716286794,3.67504841272264,185.40951241645,106.261606855237,157.580646936113,228.233817356034,223.355873581412,232.559459101923,13.3450627054112,8.81979301609777,6.05704282133549,3.9119567217402,18.9681886050988,20.6505011770404,43.3578674935652,10.0790223570261,10.062679505548,3.35565212115473,3.62681071005672,2.01656279485478,11.0621557495457,18.3381401560804,15.9858348606007,47.9490012237247,39.6743234454025,38.0298842103708,4.06613438482959,1.77858959222228,1.7997994345628,3.9554654502679,0.7104801149461,11.9840044207362,26.1268447618657,57.962493280439,42.7968824511459,50.4779907243317,35.7063730504754,32.9094126017904,48.3838656899068,45.814135146717,36.7687514644008,60.5637345496638,95.5101288877204,81.1042495592965,44.8413378282659,50.7756421993374,53.1331637967895,41.5982668512058,27.5753678915523,47.9786498019184,59.2203456802072,57.9452740852349,46.0406631188492,41.3465015599185,70.5082655796309,8.11620568364698,18.0689014166091,9.51959867190851,25.9057531986152,35.7377029596218,25.5375325645481,19.3813299781818,3.2381761289831,1.55871602761721,2.82671659608272,64.787973097273,5.13305909657271,0,0,3.030874574157,2.28023878927589,2.02209778005913,23.2935114626882,9.06282592765101,13.8051189330287,11.7970022200972,11.5696881758614,11.761390360059,12.0578112442098,14.9337658062345,24.002318943968,6.17987419335935,34.7038456607788,48.6535803572431,15.206083895056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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:230316 | |||
|HGNC= | |||
|MCL_coexpression_id=552 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8BH27,uniprot:Q0VGR4 | |||
|association_with_transcript=0bp_to_ENSMUST00000107359,NM_172694,uc008tib.1_5end | |||
|cluster_id=chr4:70195938..70196021,- | |||
|description=CAGE_peak_1_at_Megf9_5end | |||
|id=chr4:70195938..70196021,- | |||
|ontology_enrichment_celltype=CL:0000540!1.63e-12!33;CL:0000047!1.63e-12!33;CL:0000031!1.63e-12!33;CL:0000404!1.63e-12!33;CL:0000221!8.78e-12!44;CL:0000133!8.78e-12!44;CL:0002319!2.83e-11!43;CL:0000117!1.70e-10!23;CL:0000337!1.70e-10!23;CL:0000393!7.46e-10!39;CL:0000211!7.46e-10!39;CL:0000055!3.41e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.63e-12,33;CL:0000047,1.63e-12,33;CL:0000031,1.63e-12,33;CL:0000404,1.63e-12,33;CL:0000221,8.78e-12,44;CL:0000133,8.78e-12,44;CL:0002319,2.83e-11,43;CL:0000117,1.70e-10,23;CL:0000337,1.70e-10,23;CL:0000393,7.45e-10,39;CL:0000211,7.45e-10,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.69e-23!102;UBERON:0000924!1.69e-23!102;UBERON:0006601!1.69e-23!102;UBERON:0000073!1.53e-21!75;UBERON:0001016!1.53e-21!75;UBERON:0001017!1.65e-20!73;UBERON:0005743!1.65e-20!73;UBERON:0000033!3.89e-18!63;UBERON:0002346!2.64e-17!71;UBERON:0003075!2.64e-17!71;UBERON:0007284!2.64e-17!71;UBERON:0002020!1.55e-16!34;UBERON:0001049!8.76e-16!52;UBERON:0005068!8.76e-16!52;UBERON:0006241!8.76e-16!52;UBERON:0007135!8.76e-16!52;UBERON:0000955!2.63e-15!50;UBERON:0006238!2.63e-15!50;UBERON:0002616!6.34e-15!49;UBERON:0003056!1.07e-14!49;UBERON:0002791!1.59e-14!29;UBERON:0003528!1.59e-14!29;UBERON:0001893!1.59e-14!29;UBERON:0003080!3.52e-12!40;UBERON:0002780!9.70e-12!39;UBERON:0001890!9.70e-12!39;UBERON:0006240!9.70e-12!39;UBERON:0000956!3.16e-11!21;UBERON:0001869!3.16e-11!21;UBERON:0000203!3.16e-11!21;UBERON:0002619!2.35e-09!17;UBERON:0004111!4.04e-09!122;UBERON:0000025!5.03e-09!114;UBERON:0000475!6.70e-09!200;UBERON:0007811!1.53e-07!86;UBERON:0000153!1.58e-07!94;UBERON:0002021!4.95e-07!10;UBERON:0000411!4.95e-07!10;UBERON:0001950!4.95e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.79e-25,95;UBERON:0000924,2.79e-25,95;UBERON:0006601,2.79e-25,95;UBERON:0001016,1.53e-21,75;UBERON:0010371,3.85e-21,73;UBERON:0001017,1.65e-20,73;UBERON:0002346,2.27e-19,64;UBERON:0003075,2.27e-19,64;UBERON:0007284,2.27e-19,64;UBERON:0000073,5.01e-17,54;UBERON:0002020,1.55e-16,34;UBERON:0001049,8.76e-16,52;UBERON:0005068,8.76e-16,52;UBERON:0006241,8.76e-16,52;UBERON:0007135,8.76e-16,52;UBERON:0003056,1.07e-14,49;UBERON:0003528,1.59e-14,29;UBERON:0002791,1.59e-14,29;UBERON:0001893,1.59e-14,29;UBERON:0000955,1.53e-13,47;UBERON:0006238,1.53e-13,47;UBERON:0002616,3.59e-13,46;UBERON:0003080,3.52e-12,40;UBERON:0010314,7.09e-12,92;UBERON:0002780,9.70e-12,39;UBERON:0001890,9.70e-12,39;UBERON:0006240,9.70e-12,39;UBERON:0000956,3.16e-11,21;UBERON:0001869,3.16e-11,21;UBERON:0000203,3.16e-11,21;UBERON:0002619,2.35e-09,17;UBERON:0004111,4.04e-09,122;UBERON:0000025,5.03e-09,114;UBERON:0002021,4.95e-07,10;UBERON:0000411,4.95e-07,10;UBERON:0001950,4.95e-07,10;UBERON:0000483,5.26e-07,174 | |||
|phase1_expression=24.1824759128239,30.0118850569851,22.2949627300873,2.72217790176147,5.00895729946347,23.3352187957527,18.9226238882376,3.35720640948098,1.12630977721333,4.21316147379588,0.34243593645101,0.239316476986009,3.59521532855532,2.79745287740792,5.3297561890506,5.87178275430495,3.49780939064073,2.83915948822414,2.4680598049033,2.12194825899015,26.9587229778891,2.28369187762036,2.61199789138935,11.0394771727451,11.2410547722913,21.2465826722557,19.8150518233174,18.0995835456147,8.36103045608045,10.0812051903972,20.399206980288,5.71527606113668,3.07532393792285,0,2.88851619751275,1.32987716286794,3.67504841272264,185.40951241645,106.261606855237,157.580646936113,228.233817356034,223.355873581412,232.559459101923,13.3450627054112,8.81979301609777,6.05704282133549,3.9119567217402,18.9681886050988,20.6505011770404,43.3578674935652,10.0790223570261,10.062679505548,3.35565212115473,3.62681071005672,2.01656279485478,11.0621557495457,18.3381401560804,15.9858348606007,47.9490012237247,39.6743234454025,38.0298842103708,4.06613438482959,1.77858959222228,1.7997994345628,3.9554654502679,0.7104801149461,11.9840044207362,26.1268447618657,57.962493280439,42.7968824511459,50.4779907243317,35.7063730504754,32.9094126017904,48.3838656899068,45.814135146717,36.7687514644008,60.5637345496638,95.5101288877204,81.1042495592965,44.8413378282659,50.7756421993374,53.1331637967895,41.5982668512058,27.5753678915523,47.9786498019184,59.2203456802072,57.9452740852349,46.0406631188492,41.3465015599185,70.5082655796309,8.11620568364698,18.0689014166091,9.51959867190851,25.9057531986152,35.7377029596218,25.5375325645481,19.3813299781818,3.2381761289831,1.55871602761721,2.82671659608272,64.787973097273,5.13305909657271,0,0,3.030874574157,2.28023878927589,2.02209778005913,23.2935114626882,9.06282592765101,13.8051189330287,11.7970022200972,11.5696881758614,11.761390360059,12.0578112442098,14.9337658062345,24.002318943968,6.17987419335935,34.7038456607788,48.6535803572431,15.2060838950565,15.4589062922275,17.9403843660032,24.2309289583559,63.2406521544942,83.1503426049417,7.40825460104915,4.07371423320129,4.19931911695385,6.22644112658017,50.0300735612108,55.8150735438724,71.4973263522198,71.0941469586411,78.2489299430811,76.050424308799,60.0292673350703,18.8402823123085,18.0390107384635,9.85618757891331,79.5470215250872,14.1831282829347,24.1397209655147,34.2118046630164,30.7437828384859,47.3534034093242,43.8148923374186,38.1366018958096,48.3775303281959,14.2274875335676,17.2086532952716,17.7710635405588,11.1789823538063,19.7413546950174,34.8252166522167,31.8962311432312,10.1507476077432,3.51106593656617,5.91900186363845,9.09323198065896,8.90640821902658,6.0976775595085,6.30217215113552,7.81257627431194,7.47704080640135,8.17615698303105,6.51095045301142,9.12129564758705,6.53885917256149,13.9875872426458,11.6558899496158,19.0511702432761,11.9883989688773,12.2948064562988,12.6154033634749,84.1159794256509,67.0938072712934,2.31293148088659,7.66906643324278,12.797295032114,12.3085436086032,10.5671318284117,9.07575860805041,7.33847544688072,6.08722003560189,7.11793592316767,7.41145296258049,5.27803938480566,8.35617182572834,4.67913809085888,4.49409704327111,7.5648317456143,5.57595565112228,13.6560888686219,15.8805432527523,15.7790829942313,16.4957575554705,17.4557238450863,20.8303385074246,16.0620804295614,17.2703873136135,17.7408562460754,13.4502908674763,19.862326014839,7.50802975722423,10.2210677458866,8.99448449539415,13.7944882544182,17.1235783424216,14.0044218479781,26.7557407829254,48.4784328057356,13.1789478330279,50.3188722845741,24.1891615984527,24.6509761760503,36.3713584243841,26.1920223741992,41.0076993158862,29.7452636168234,11.9379589415405,10.7556884451737,10.6939404038369,10.7957514212711,16.4156132292979,16.1869675802489,26.147908812945,20.9654741661234,24.8040452406628,24.874943910568,26.3819936692338,29.0110769534705,28.6405135991393,0,1.63171705145613,4.42587845717133,4.41498794087572,48.646828766301,49.4633317419097,14.7541450839008,11.1087207969924,24.2941328950518,32.406415776621,45.4543369216206,29.3931621481639,31.8602103937824,36.5168724717594,38.8618273607899,23.380468632905,26.4842811224171,42.4144137676785,11.7810270722863,10.1497394090335,19.0577742443684,9.07335676348945,18.5843193675948,6.31229654002952,8.16273603804828,5.65815239267694,5.02013217897314,11.0676653259814,12.9214146584111,9.81541069589265,11.7644134866958,13.9056173491759,8.4334886859999,7.21948802737308,15.3197822589205,12.6042765821917,5.43306471887569,9.21649250635847,14.3645589250242,13.1992925025532,15.3030589159972,16.1366423030738,7.27482294997502,10.591603543191,7.49796553386871,88.3790315766333,51.0227588359062,56.0307072582568,54.9112782414428,67.9543324944554,5.24665505933731,70.0907641599727,13.3279287022325,9.49379592630823,14.0747840800981,13.9392658183471,14.0795054552656,9.83746144788047,4.75939603982795,5.318155188299,6.21899882119907,12.4107180341965,20.4036715859832,18.5020715085432,12.5286195353289,16.517975385143,15.940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| |||
|short_description=p1@Megf9 | |||
}} |
Revision as of 17:20, 5 August 2015
Short description: | p1@Megf9 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Megf9_5end |
Coexpression cluster: | MCL_coexpression_mm9:552 |
Association with transcript: | 0bp_to_ENSMUST00000107359, NM_172694, uc008tib.1_5end |
EntrezGene: | 230316 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.63e-12 | 33 |
neuronal stem cell | 1.63e-12 | 33 |
neuroblast | 1.63e-12 | 33 |
electrically signaling cell | 1.63e-12 | 33 |
ectodermal cell | 8.78e-12 | 44 |
neurectodermal cell | 8.78e-12 | 44 |
neural cell | 2.83e-11 | 43 |
CNS neuron (sensu Vertebrata) | 1.70e-10 | 23 |
neuroblast (sensu Vertebrata) | 1.70e-10 | 23 |
electrically responsive cell | 7.45e-10 | 39 |
electrically active cell | 7.45e-10 | 39 |