FFCP PHASE1:Mm9::chr11:24058300..24058311,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=392 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:24058300..24058311,+ | |||
|description=CAGE_peak_at_chr11:24058300..24058311,+ | |description=CAGE_peak_at_chr11:24058300..24058311,+ | ||
|id=chr11:24058300..24058311,+ | |id=chr11:24058300..24058311,+ | ||
|ontology_enrichment_celltype=CL:0000117!1.00e-08!23;CL:0000337!1.00e-08!23 | |ontology_enrichment_celltype=CL:0000117!1.00e-08!23;CL:0000337!1.00e-08!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0002609,2.04e-19,6;CL:0000117,3.64e-17,23;CL:0000337,3.64e-17,23;CL:0000540,3.14e-11,33;CL:0000047,3.14e-11,33;CL:0000031,3.14e-11,33;CL:0000404,3.14e-11,33;CL:0002608,1.58e-10,3;CL:0000393,3.91e-09,39;CL:0000211,3.91e-09,39;CL:0000553,2.15e-08,6;CL:0000556,2.15e-08,6;CL:0002319,4.58e-08,43;CL:0000221,7.90e-08,44;CL:0000133,7.90e-08,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!3.48e-13!34;UBERON:0001049!3.88e-12!52;UBERON:0005068!3.88e-12!52;UBERON:0006241!3.88e-12!52;UBERON:0007135!3.88e-12!52;UBERON:0002791!1.26e-11!29;UBERON:0003528!1.26e-11!29;UBERON:0001893!1.26e-11!29;UBERON:0000955!4.72e-11!50;UBERON:0006238!4.72e-11!50;UBERON:0002780!5.82e-11!39;UBERON:0001890!5.82e-11!39;UBERON:0006240!5.82e-11!39;UBERON:0000956!7.70e-11!21;UBERON:0001869!7.70e-11!21;UBERON:0000203!7.70e-11!21;UBERON:0002616!1.70e-10!49;UBERON:0003080!2.15e-10!40;UBERON:0001017!3.51e-09!73;UBERON:0005743!3.51e-09!73;UBERON:0000033!6.45e-09!63;UBERON:0000073!1.59e-08!75;UBERON:0001016!1.59e-08!75;UBERON:0003056!1.86e-08!49;UBERON:0002619!1.95e-08!17;UBERON:0002346!2.21e-07!71;UBERON:0003075!2.21e-07!71;UBERON:0007284!2.21e-07!71;UBERON:0000153!2.93e-07!94;UBERON:0002021!3.27e-07!10;UBERON:0000411!3.27e-07!10;UBERON:0001950!3.27e-07!10 | |ontology_enrichment_uberon=UBERON:0002020!3.48e-13!34;UBERON:0001049!3.88e-12!52;UBERON:0005068!3.88e-12!52;UBERON:0006241!3.88e-12!52;UBERON:0007135!3.88e-12!52;UBERON:0002791!1.26e-11!29;UBERON:0003528!1.26e-11!29;UBERON:0001893!1.26e-11!29;UBERON:0000955!4.72e-11!50;UBERON:0006238!4.72e-11!50;UBERON:0002780!5.82e-11!39;UBERON:0001890!5.82e-11!39;UBERON:0006240!5.82e-11!39;UBERON:0000956!7.70e-11!21;UBERON:0001869!7.70e-11!21;UBERON:0000203!7.70e-11!21;UBERON:0002616!1.70e-10!49;UBERON:0003080!2.15e-10!40;UBERON:0001017!3.51e-09!73;UBERON:0005743!3.51e-09!73;UBERON:0000033!6.45e-09!63;UBERON:0000073!1.59e-08!75;UBERON:0001016!1.59e-08!75;UBERON:0003056!1.86e-08!49;UBERON:0002619!1.95e-08!17;UBERON:0002346!2.21e-07!71;UBERON:0003075!2.21e-07!71;UBERON:0007284!2.21e-07!71;UBERON:0000153!2.93e-07!94;UBERON:0002021!3.27e-07!10;UBERON:0000411!3.27e-07!10;UBERON:0001950!3.27e-07!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,4.01e-29,34;UBERON:0003528,7.82e-28,29;UBERON:0002791,7.82e-28,29;UBERON:0001893,7.82e-28,29;UBERON:0000956,3.68e-27,21;UBERON:0001869,3.68e-27,21;UBERON:0000203,3.68e-27,21;UBERON:0002619,1.25e-20,17;UBERON:0002780,9.29e-20,39;UBERON:0001890,9.29e-20,39;UBERON:0006240,9.29e-20,39;UBERON:0003080,3.58e-19,40;UBERON:0002021,5.54e-19,10;UBERON:0000411,5.54e-19,10;UBERON:0001950,5.54e-19,10;UBERON:0001049,1.21e-17,52;UBERON:0005068,1.21e-17,52;UBERON:0006241,1.21e-17,52;UBERON:0007135,1.21e-17,52;UBERON:0000073,7.68e-17,54;UBERON:0002616,3.40e-16,46;UBERON:0000955,9.00e-16,47;UBERON:0006238,9.00e-16,47;UBERON:0003056,5.59e-15,49;UBERON:0001017,1.88e-14,73;UBERON:0001016,6.00e-14,75;UBERON:0002346,1.41e-13,64;UBERON:0003075,1.41e-13,64;UBERON:0007284,1.41e-13,64;UBERON:0010371,2.09e-11,73;UBERON:0004121,4.40e-10,95;UBERON:0000924,4.40e-10,95;UBERON:0006601,4.40e-10,95;UBERON:0010314,3.18e-08,92 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0.333109761815663,0.404950534779652,2.09868563438444,2.5236973228659,1.23402990245165,2.12194825899015,0.0850432901510698,0.0992909512008853,0.783599367416806,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0.61506478758457,0,0.288851619751275,0.332469290716985,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0,0,0,1.34226084846189,0.725362142011344,0,0,0,0,1.41621522601718,2.11596391708813,0,0,0,0,0,0,0,0.384218305321555,2.48855069540346,6.48028503992115,2.3135745748652,0.285650984403804,0,1.95985278743926,3.83381884072945,7.35375029288017,0,0.127687338085188,0.768032666281217,0.659431438650969,2.47016637726506,1.04182674111352,0.837548997004143,0,0,1.17851434189467,1.28134512719193,0.931997229126503,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0.505524445014783,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0.220841518460394,0,0,0.292780797011547,0.209446706813455,0,0.599075622529601,0,0.508280908292259,0,0,1.00523481690292,0.173824320192276,0.255715457330331,0.20778804455956,0.324482526135515,0,0,0,0,0,0,0,0.452114453507145,0.136072998302656,0,0.468508622798644,0,1.07783996466421,1.13463648100692,0.351902248327898,0.43839146485515,0.556094498451196,0,0.61734640922383,0,0,0,0,0,0.234526059981096,0.36012412292203,0,0,0.308534225774757,0,0,0.116765342367169,0,0,0,0,0,0,0.210289948564127,0.823236899034275,0,0,0.639864751605702,0.464473343720877,0.257734922644187,0.201683524623343,0,0.190225626112559,0,0,0,0.198956472041151,0.19496408711912,0,0.216138049874694,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0.500535317148282,0.589676985339609,0.674586337154561,0.202860121388503,0.241177159752417,0,0.575392274901621,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0.169745085775188,0.234690248288502,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0.963963949265421,0,0,0,0,0,0.242780636154981,0,0.188605079755898,0.295301892880773,0,0,0,0,0,0,0,0,0,0.258717367565509,0.214337035031592,0.354680467284547,0,0,0.608929898229199,0,0,0,0,0.161464426695906,0.0603129249281559,0.238744688006273,0.164140899745061,0,0.18542530201051,0.512612642393558,0,0,0.565105371014073,0.546776910884101,0,0.169978429993855,0.139951452323658,0.276399947608848,0,0.158167996790568,0.406638934253697,0,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0.316011120628178,0.405450430580328,0.102710957164827,0.129920822977795,0,0.198681354781265,0,0.147689527174577,0,0,0,0,0,0,0.226730383615211,0,0,0.167884616364078,0,0,0,0,0,3.3885110557024,4.14292712856459,1.71868654031819,1.54667864109319,1.37016503954128,0.755393897389701,2.70009000092722,1.35096360967266,2.26571204492102,0,0.415149390336707,0.399024873401031,0.341467211508268,0.729320151204882,0,0.183843508450014,0.44449345560323,0,0,0.252697211763798,0,0,0.187283014939765,0.0640251524048693,0.17230640686684,0,0.115884325944855,0.38581844092741,0,0,0.342869252385415,0,0.238436189947321,0.290692833264657,0.188218760830661,0.0846146078916765,0.182927972872773,1.05227884575137,0.271608227691724,0,0,0.197008964751127,0.818462086339379,0,0.192906610981141,1.24905288968973,0.233931608445408,0.214871054048298,0,0,0 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|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0.333109761815663,0.404950534779652,2.09868563438444,2.5236973228659,1.23402990245165,2.12194825899015,0.0850432901510698,0.0992909512008853,0.783599367416806,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0.61506478758457,0,0.288851619751275,0.332469290716985,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0,0,0,1.34226084846189,0.725362142011344,0,0,0,0,1.41621522601718,2.11596391708813,0,0,0,0,0,0,0,0.384218305321555,2.48855069540346,6.48028503992115,2.3135745748652,0.285650984403804,0,1.95985278743926,3.83381884072945,7.35375029288017,0,0.127687338085188,0.768032666281217,0.659431438650969,2.47016637726506,1.04182674111352,0.837548997004143,0,0,1.17851434189467,1.28134512719193,0.931997229126503,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0.505524445014783,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0.220841518460394,0,0,0.292780797011547,0.209446706813455,0,0.599075622529601,0,0.508280908292259,0,0,1.00523481690292,0.173824320192276,0.255715457330331,0.20778804455956,0.324482526135515,0,0,0,0,0,0,0,0.452114453507145,0.136072998302656,0,0.468508622798644,0,1.07783996466421,1.13463648100692,0.351902248327898,0.43839146485515,0.556094498451196,0,0.61734640922383,0,0,0,0,0,0.234526059981096,0.36012412292203,0,0,0.308534225774757,0,0,0.116765342367169,0,0,0,0,0,0,0.210289948564127,0.823236899034275,0,0,0.639864751605702,0.464473343720877,0.257734922644187,0.201683524623343,0,0.190225626112559,0,0,0,0.198956472041151,0.19496408711912,0,0.216138049874694,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0.500535317148282,0.589676985339609,0.674586337154561,0.202860121388503,0.241177159752417,0,0.575392274901621,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0.169745085775188,0.234690248288502,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0.963963949265421,0,0,0,0,0,0.242780636154981,0,0.188605079755898,0.295301892880773,0,0,0,0,0,0,0,0,0,0.258717367565509,0.214337035031592,0.354680467284547,0,0,0.608929898229199,0,0,0,0,0.161464426695906,0.0603129249281559,0.238744688006273,0.164140899745061,0,0.18542530201051,0.512612642393558,0,0,0.565105371014073,0.546776910884101,0,0.169978429993855,0.139951452323658,0.276399947608848,0,0.158167996790568,0.406638934253697,0,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0.316011120628178,0.405450430580328,0.102710957164827,0.129920822977795,0,0.198681354781265,0,0.147689527174577,0,0,0,0,0,0,0.226730383615211,0,0,0.167884616364078,0,0,0,0,0,3.3885110557024,4.14292712856459,1.71868654031819,1.54667864109319,1.37016503954128,0.755393897389701,2.70009000092722,1.35096360967266,2.26571204492102,0,0.415149390336707,0.399024873401031,0.341467211508268,0.729320151204882,0,0.183843508450014,0.44449345560323,0,0,0.252697211763798,0,0,0.187283014939765,0.0640251524048693,0.17230640686684,0,0.115884325944855,0.38581844092741,0,0,0.342869252385415,0,0.238436189947321,0.290692833264657,0.188218760830661,0.0846146078916765,0.182927972872773,1.05227884575137,0.271608227691724,0,0,0.197008964751127,0.818462086339379,0,0.192906610981141,1.24905288968973,0.233931608445408,0.214871054048298,0,0,0 | ||
|short_description=p@chr11:24058300..24058311,+ | |short_description=p@chr11:24058300..24058311,+ | ||
}} | }} |
Latest revision as of 18:19, 5 August 2015
Short description: | p@chr11:24058300..24058311, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:24058300..24058311, + |
Coexpression cluster: | MCL_coexpression_mm9:392 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 2.04e-19 | 6 |
CNS neuron (sensu Vertebrata) | 3.64e-17 | 23 |
neuroblast (sensu Vertebrata) | 3.64e-17 | 23 |
neuron | 3.14e-11 | 33 |
neuronal stem cell | 3.14e-11 | 33 |
neuroblast | 3.14e-11 | 33 |
electrically signaling cell | 3.14e-11 | 33 |
hippocampal neuron | 1.58e-10 | 3 |
electrically responsive cell | 3.91e-09 | 39 |
electrically active cell | 3.91e-09 | 39 |
megakaryocyte progenitor cell | 2.15e-08 | 6 |
megakaryocyte | 2.15e-08 | 6 |
neural cell | 4.58e-08 | 43 |
ectodermal cell | 7.90e-08 | 44 |
neurectodermal cell | 7.90e-08 | 44 |
Ontology term | p-value | n |
---|---|---|
gray matter | 4.01e-29 | 34 |
brain grey matter | 7.82e-28 | 29 |
regional part of telencephalon | 7.82e-28 | 29 |
telencephalon | 7.82e-28 | 29 |
cerebral cortex | 3.68e-27 | 21 |
cerebral hemisphere | 3.68e-27 | 21 |
pallium | 3.68e-27 | 21 |
regional part of cerebral cortex | 1.25e-20 | 17 |
regional part of forebrain | 9.29e-20 | 39 |
forebrain | 9.29e-20 | 39 |
future forebrain | 9.29e-20 | 39 |
anterior neural tube | 3.58e-19 | 40 |
occipital lobe | 5.54e-19 | 10 |
visual cortex | 5.54e-19 | 10 |
neocortex | 5.54e-19 | 10 |
neural tube | 1.21e-17 | 52 |
neural rod | 1.21e-17 | 52 |
future spinal cord | 1.21e-17 | 52 |
neural keel | 1.21e-17 | 52 |
regional part of nervous system | 7.68e-17 | 54 |
regional part of brain | 3.40e-16 | 46 |
brain | 9.00e-16 | 47 |
future brain | 9.00e-16 | 47 |
pre-chordal neural plate | 5.59e-15 | 49 |
central nervous system | 1.88e-14 | 73 |
nervous system | 6.00e-14 | 75 |
neurectoderm | 1.41e-13 | 64 |
neural plate | 1.41e-13 | 64 |
presumptive neural plate | 1.41e-13 | 64 |
ecto-epithelium | 2.09e-11 | 73 |
ectoderm-derived structure | 4.40e-10 | 95 |
ectoderm | 4.40e-10 | 95 |
presumptive ectoderm | 4.40e-10 | 95 |
structure with developmental contribution from neural crest | 3.18e-08 | 92 |