FFCP PHASE1:Mm9::chr4:9196485..9196509,+: Difference between revisions
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{{FFCP|EntrezGene=74438|HGNC=|MCL_coexpression_id=281|UniProt=|association_with_transcript=0bp_to_ENSMUST00000141734_5end|description=CAGE_peak_2_at_Clvs1_5end|id=chr4:9196485..9196509,+|ontology_enrichment_celltype=CL:0000540!1.35e-18!33;CL:0000047!1.35e-18!33;CL:0000031!1.35e-18!33;CL:0000404!1.35e-18!33;CL:0000117!6.12e-14!23;CL:0000337!6.12e-14!23;CL:0000393!2.43e-13!39;CL:0000211!2.43e-13!39;CL:0002319!7.82e-13!43;CL:0000221!3.41e-12!44;CL:0000133!3.41e-12!44;CL:0000055!5.37e-09!50;CL:0000107!7.13e-07!9|ontology_enrichment_celltype_v019_2=CL:0000540,6.26e-22,33;CL:0000047,6.26e-22,33;CL:0000031,6.26e-22,33;CL:0000404,6.26e-22,33;CL:0000393,1.55e-16,39;CL:0000211,1.55e-16,39;CL:0000117,3.18e-16,23;CL:0000337,3.18e-16,23;CL:0002319,2.31e-15,43;CL:0000221,1.01e-14,44;CL:0000133,1.01e-14,44;CL:0000107,7.37e-08,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!2.83e-31!75;UBERON:0001016!2.83e-31!75;UBERON:0001017!5.16e-31!73;UBERON:0005743!5.16e-31!73;UBERON:0002346!5.10e-30!71;UBERON:0003075!5.10e-30!71;UBERON:0007284!5.10e-30!71;UBERON:0004121!1.46e-28!102;UBERON:0000924!1.46e-28!102;UBERON:0006601!1.46e-28!102;UBERON:0001049!3.01e-23!52;UBERON:0005068!3.01e-23!52;UBERON:0006241!3.01e-23!52;UBERON:0007135!3.01e-23!52;UBERON:0000955!2.24e-22!50;UBERON:0006238!2.24e-22!50;UBERON:0000033!2.31e-22!63;UBERON:0002616!1.58e-21!49;UBERON:0003056!4.19e-21!49;UBERON:0002020!1.80e-18!34;UBERON:0003080!4.66e-18!40;UBERON:0002780!2.06e-17!39;UBERON:0001890!2.06e-17!39;UBERON:0006240!2.06e-17!39;UBERON:0002791!1.93e-15!29;UBERON:0003528!1.93e-15!29;UBERON:0001893!1.93e-15!29;UBERON:0007811!3.28e-12!86;UBERON:0000956!7.63e-11!21;UBERON:0001869!7.63e-11!21;UBERON:0000203!7.63e-11!21;UBERON:0000153!2.47e-09!94;UBERON:0002619!1.80e-08!17;UBERON:0002021!3.50e-08!10;UBERON:0000411!3.50e-08!10;UBERON:0001950!3.50e-08!10;UBERON:0002410!7.13e-07!9;UBERON:0000010!8.86e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.92e-32,75;UBERON:0001017,6.31e-32,73;UBERON:0002346,1.84e-29,64;UBERON:0003075,1.84e-29,64;UBERON:0007284,1.84e-29,64;UBERON:0004121,2.64e-29,95;UBERON:0000924,2.64e-29,95;UBERON:0006601,2.64e-29,95;UBERON:0000073,1.23e-24,54;UBERON:0010371,3.66e-23,73;UBERON:0001049,6.14e-23,52;UBERON:0005068,6.14e-23,52;UBERON:0006241,6.14e-23,52;UBERON:0007135,6.14e-23,52;UBERON:0002020,5.80e-22,34;UBERON:0003056,3.18e-20,49;UBERON:0000955,2.07e-19,47;UBERON:0006238,2.07e-19,47;UBERON:0002616,1.71e-18,46;UBERON:0003528,2.33e-18,29;UBERON:0002791,2.33e-18,29;UBERON:0001893,2.33e-18,29;UBERON:0010314,1.44e-17,92;UBERON:0003080,1.22e-16,40;UBERON:0002780,6.41e-16,39;UBERON:0001890,6.41e-16,39;UBERON:0006240,6.41e-16,39;UBERON:0000956,6.74e-13,21;UBERON:0001869,6.74e-13,21;UBERON:0000203,6.74e-13,21;UBERON:0002619,4.47e-10,17;UBERON:0002021,2.09e-09,10;UBERON:0000411,2.09e-09,10;UBERON:0001950,2.09e-09,10;UBERON:0002410,7.37e-08,9;UBERON:0000010,9.53e-08,11;UBERON:0003076,5.62e-07,12;UBERON:0003057,5.62e-07,12|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.25216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.71119012126069,12.6957835025288,3.80298842103708,0,0,0,0,0,0,0.384218305321555,15.7608210708886,11.340498819862,11.3575479129746,6.85562362569129,6.84692476950002,7.83941114975706,6.03826467414889,6.43453150627015,18.7196997698961,16.5993539510744,19.2008166570304,14.1118327871307,11.3444678066988,13.5437476344758,9.77140496504833,6.19038871034848,9.16789486660861,17.0884579574727,15.3761415263031,15.2847545576746,1.06016670666458,1.058001841495,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,1.48442139064825,2.08182392119363,1.82679286987285,0.922461989024234,2.71300752994721,1.52865319276416,0.251333182659351,0,0.289198713839823,0,0,0,0,0,41.5748731756397,34.5587066242201,0,0,0,0,14.379901382863,41.1750542536764,11.4345460422707,18.251553620189,9.2057564638919,27.4280218818619,21.7403292510795,0,0,0,1.05220927943237,1.95180664444056,2.75882525320168,3.06105620669094,2.86339153887859,4.55844544313897,5.89323113310309,4.49768277886698,4.39795730256327,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,15.1408762966172,9.57012895127345,0,0,3.19932375802851,5.10920678092965,2.57734922644187,3.22693639397348,2.44615848229357,0.951128130562796,0.949058123089023,0.988193728344065,0.502670417600539,1.1937388322469,0.58489226135736,0,0,0.597423819763102,0.189667900953082,0.342745537829186,0,0.203651327845314,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0.509235257325564,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,17.9816660786327,13.0104972117346,0,0,11.6738041184015,18.7410597262386,26.0662311256687,3.10659437338318,8.46634961513098,10.4738316391868,13.7635638569464,23.0882127749936,33.5994611254545,38.237236654195,0.141940085208269,0,0,0,0,0.242780636154981,0.302323556964751,0,0.295301892880773,0.307435147943927,0.258428293168221,0.363533729477506,0,0,0,0,17.0219802876894,0.540183282093931,0.388076051348264,0.428674070063185,0.532020700926821,0.891844088010353,1.31639216481697,0.913394847343798,12.2029288193129,1.0591603543191,1.10264199027481,0,0,0,0,0,0.291480836629851,20.7676338251771,0,0,0,0,0,0,0,0,0,0,4.74503990371703,3.65975040828328,1.83609079397062,2.09088296014469,1.52853794622324,0.674321731924103,0.661227645802687,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405450430580328,0.205421914329655,0.129920822977795,0,0,0,0.147689527174577,0,0,0,0,0,0.116876902181569,0,0,0,0,0.19318959403219,0.93841237725591,0,0,0,20.3310663342144,21.1749608793301,25.2074025913335,18.7319968754619,15.7568979547248,12.0863023582352,17.550585006027,13.5096360967266,15.8599843144472,15.0150490408028,4.15149390336707,11.5717213286299,6.65861062441123,4.86213434136588,1.88651846365184,1.2869045591501,3.11145418922261,2.47242068686673,2.88827288632634,3.03236654116557,4.05566879824384,2.45214243801899,2.99652823903624,2.4969809437899,2.35485422718014,2.85776214769844,3.1288768005111,2.31491064556446,2.06042950401653,2.06078488188156,1.37147700954166,1.77475806159337,1.90748951957857,3.19762116591123,2.72917203204459,2.11536519729191,2.74391959309159,2.10455769150274,3.93831930152999,1.68342681497322,1.54225523561426,2.56111654176465,2.04615521584845,2.63392630016142,1.15743966588685,4.74640098082097,2.57324769289949,3.22306581072447,0.765153328275374,0.441182838239031,1.15933917810211|short_description=p2@Clvs1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:74438 | |||
|HGNC= | |||
|MCL_coexpression_id=281 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000141734_5end | |||
|cluster_id=chr4:9196485..9196509,+ | |||
|description=CAGE_peak_2_at_Clvs1_5end | |||
|id=chr4:9196485..9196509,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.35e-18!33;CL:0000047!1.35e-18!33;CL:0000031!1.35e-18!33;CL:0000404!1.35e-18!33;CL:0000117!6.12e-14!23;CL:0000337!6.12e-14!23;CL:0000393!2.43e-13!39;CL:0000211!2.43e-13!39;CL:0002319!7.82e-13!43;CL:0000221!3.41e-12!44;CL:0000133!3.41e-12!44;CL:0000055!5.37e-09!50;CL:0000107!7.13e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,6.26e-22,33;CL:0000047,6.26e-22,33;CL:0000031,6.26e-22,33;CL:0000404,6.26e-22,33;CL:0000393,1.55e-16,39;CL:0000211,1.55e-16,39;CL:0000117,3.18e-16,23;CL:0000337,3.18e-16,23;CL:0002319,2.31e-15,43;CL:0000221,1.01e-14,44;CL:0000133,1.01e-14,44;CL:0000107,7.37e-08,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.83e-31!75;UBERON:0001016!2.83e-31!75;UBERON:0001017!5.16e-31!73;UBERON:0005743!5.16e-31!73;UBERON:0002346!5.10e-30!71;UBERON:0003075!5.10e-30!71;UBERON:0007284!5.10e-30!71;UBERON:0004121!1.46e-28!102;UBERON:0000924!1.46e-28!102;UBERON:0006601!1.46e-28!102;UBERON:0001049!3.01e-23!52;UBERON:0005068!3.01e-23!52;UBERON:0006241!3.01e-23!52;UBERON:0007135!3.01e-23!52;UBERON:0000955!2.24e-22!50;UBERON:0006238!2.24e-22!50;UBERON:0000033!2.31e-22!63;UBERON:0002616!1.58e-21!49;UBERON:0003056!4.19e-21!49;UBERON:0002020!1.80e-18!34;UBERON:0003080!4.66e-18!40;UBERON:0002780!2.06e-17!39;UBERON:0001890!2.06e-17!39;UBERON:0006240!2.06e-17!39;UBERON:0002791!1.93e-15!29;UBERON:0003528!1.93e-15!29;UBERON:0001893!1.93e-15!29;UBERON:0007811!3.28e-12!86;UBERON:0000956!7.63e-11!21;UBERON:0001869!7.63e-11!21;UBERON:0000203!7.63e-11!21;UBERON:0000153!2.47e-09!94;UBERON:0002619!1.80e-08!17;UBERON:0002021!3.50e-08!10;UBERON:0000411!3.50e-08!10;UBERON:0001950!3.50e-08!10;UBERON:0002410!7.13e-07!9;UBERON:0000010!8.86e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.92e-32,75;UBERON:0001017,6.31e-32,73;UBERON:0002346,1.84e-29,64;UBERON:0003075,1.84e-29,64;UBERON:0007284,1.84e-29,64;UBERON:0004121,2.64e-29,95;UBERON:0000924,2.64e-29,95;UBERON:0006601,2.64e-29,95;UBERON:0000073,1.23e-24,54;UBERON:0010371,3.66e-23,73;UBERON:0001049,6.14e-23,52;UBERON:0005068,6.14e-23,52;UBERON:0006241,6.14e-23,52;UBERON:0007135,6.14e-23,52;UBERON:0002020,5.80e-22,34;UBERON:0003056,3.18e-20,49;UBERON:0000955,2.07e-19,47;UBERON:0006238,2.07e-19,47;UBERON:0002616,1.71e-18,46;UBERON:0003528,2.33e-18,29;UBERON:0002791,2.33e-18,29;UBERON:0001893,2.33e-18,29;UBERON:0010314,1.44e-17,92;UBERON:0003080,1.22e-16,40;UBERON:0002780,6.41e-16,39;UBERON:0001890,6.41e-16,39;UBERON:0006240,6.41e-16,39;UBERON:0000956,6.74e-13,21;UBERON:0001869,6.74e-13,21;UBERON:0000203,6.74e-13,21;UBERON:0002619,4.47e-10,17;UBERON:0002021,2.09e-09,10;UBERON:0000411,2.09e-09,10;UBERON:0001950,2.09e-09,10;UBERON:0002410,7.37e-08,9;UBERON:0000010,9.53e-08,11;UBERON:0003076,5.62e-07,12;UBERON:0003057,5.62e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.25216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.71119012126069,12.6957835025288,3.80298842103708,0,0,0,0,0,0,0.384218305321555,15.7608210708886,11.340498819862,11.3575479129746,6.85562362569129,6.84692476950002,7.83941114975706,6.03826467414889,6.43453150627015,18.7196997698961,16.5993539510744,19.2008166570304,14.1118327871307,11.3444678066988,13.5437476344758,9.77140496504833,6.19038871034848,9.16789486660861,17.0884579574727,15.3761415263031,15.2847545576746,1.06016670666458,1.058001841495,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,1.48442139064825,2.08182392119363,1.82679286987285,0.922461989024234,2.71300752994721,1.52865319276416,0.251333182659351,0,0.289198713839823,0,0,0,0,0,41.5748731756397,34.5587066242201,0,0,0,0,14.379901382863,41.1750542536764,11.4345460422707,18.251553620189,9.2057564638919,27.4280218818619,21.7403292510795,0,0,0,1.05220927943237,1.95180664444056,2.75882525320168,3.06105620669094,2.86339153887859,4.55844544313897,5.89323113310309,4.49768277886698,4.39795730256327,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,15.1408762966172,9.57012895127345,0,0,3.19932375802851,5.10920678092965,2.57734922644187,3.22693639397348,2.44615848229357,0.951128130562796,0.949058123089023,0.988193728344065,0.502670417600539,1.1937388322469,0.58489226135736,0,0,0.597423819763102,0.189667900953082,0.342745537829186,0,0.203651327845314,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0.509235257325564,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,17.9816660786327,13.0104972117346,0,0,11.6738041184015,18.7410597262386,26.0662311256687,3.10659437338318,8.46634961513098,10.4738316391868,13.7635638569464,23.0882127749936,33.5994611254545,38.237236654195,0.141940085208269,0,0,0,0,0.242780636154981,0.302323556964751,0,0.295301892880773,0.307435147943927,0.258428293168221,0.363533729477506,0,0,0,0,17.0219802876894,0.540183282093931,0.388076051348264,0.428674070063185,0.532020700926821,0.891844088010353,1.31639216481697,0.913394847343798,12.2029288193129,1.0591603543191,1.10264199027481,0,0,0,0,0,0.291480836629851,20.7676338251771,0,0,0,0,0,0,0,0,0,0,4.74503990371703,3.65975040828328,1.83609079397062,2.09088296014469,1.52853794622324,0.674321731924103,0.661227645802687,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405450430580328,0.205421914329655,0.129920822977795,0,0,0,0.147689527174577,0,0,0,0,0,0.116876902181569,0,0,0,0,0.19318959403219,0.93841237725591,0,0,0,20.3310663342144,21.1749608793301,25.2074025913335,18.7319968754619,15.7568979547248,12.0863023582352,17.550585006027,13.5096360967266,15.8599843144472,15.0150490408028,4.15149390336707,11.5717213286299,6.65861062441123,4.86213434136588,1.88651846365184,1.2869045591501,3.11145418922261,2.47242068686673,2.88827288632634,3.03236654116557,4.05566879824384,2.45214243801899,2.99652823903624,2.4969809437899,2.35485422718014,2.85776214769844,3.1288768005111,2.31491064556446,2.06042950401653,2.06078488188156,1.37147700954166,1.77475806159337,1.90748951957857,3.19762116591123,2.72917203204459,2.11536519729191,2.74391959309159,2.10455769150274,3.93831930152999,1.68342681497322,1.54225523561426,2.56111654176465,2.04615521584845,2.63392630016142,1.15743966588685,4.74640098082097,2.57324769289949,3.22306581072447,0.765153328275374,0.441182838239031,1.15933917810211 | |||
|short_description=p2@Clvs1 | |||
}} |
Revision as of 19:49, 5 August 2015
Short description: | p2@Clvs1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Clvs1_5end |
Coexpression cluster: | MCL_coexpression_mm9:281 |
Association with transcript: | 0bp_to_ENSMUST00000141734_5end |
EntrezGene: | 74438 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 6.26e-22 | 33 |
neuronal stem cell | 6.26e-22 | 33 |
neuroblast | 6.26e-22 | 33 |
electrically signaling cell | 6.26e-22 | 33 |
electrically responsive cell | 1.55e-16 | 39 |
electrically active cell | 1.55e-16 | 39 |
CNS neuron (sensu Vertebrata) | 3.18e-16 | 23 |
neuroblast (sensu Vertebrata) | 3.18e-16 | 23 |
neural cell | 2.31e-15 | 43 |
ectodermal cell | 1.01e-14 | 44 |
neurectodermal cell | 1.01e-14 | 44 |
autonomic neuron | 7.37e-08 | 9 |