Personal tools

FFCP PHASE1:Mm9::chr3:108247192..108247215,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(4 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=NA
|EntrezGene=NA
|HGNC=
|HGNC=
|MCL_coexpression_id=231
|TSSclassifier=NA
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|association_with_transcript=NA
|cluster_id=chr3:108247192..108247215,+
|description=CAGE_peak_at_chr3:108247192..108247215,+
|description=CAGE_peak_at_chr3:108247192..108247215,+
|id=chr3:108247192..108247215,+
|id=chr3:108247192..108247215,+
|ontology_enrichment_celltype=CL:0000988!1.12e-15!32;CL:0002032!1.12e-15!32;CL:0000037!1.12e-15!32;CL:0000566!1.12e-15!32;CL:0000837!1.12e-15!32;CL:0002031!3.86e-13!25;CL:0000063!1.35e-12!66;CL:0002320!2.10e-12!46;CL:0000134!2.10e-12!46;CL:0000738!2.39e-09!17;CL:0002087!2.39e-09!17;CL:0000838!2.76e-09!12;CL:0000219!3.97e-09!54;CL:0000049!7.29e-09!19;CL:0000084!1.03e-08!11;CL:0000827!1.03e-08!11;CL:0000542!5.11e-08!13;CL:0000051!5.11e-08!13;CL:0000791!9.35e-08!9;CL:0000789!9.35e-08!9;CL:0002420!9.35e-08!9;CL:0002419!9.35e-08!9;CL:0000790!9.35e-08!9;CL:0000624!3.71e-07!8;CL:0000763!6.32e-07!16
|ontology_enrichment_celltype=CL:0000988!1.12e-15!32;CL:0002032!1.12e-15!32;CL:0000037!1.12e-15!32;CL:0000566!1.12e-15!32;CL:0000837!1.12e-15!32;CL:0002031!3.86e-13!25;CL:0000063!1.35e-12!66;CL:0002320!2.10e-12!46;CL:0000134!2.10e-12!46;CL:0000738!2.39e-09!17;CL:0002087!2.39e-09!17;CL:0000838!2.76e-09!12;CL:0000219!3.97e-09!54;CL:0000049!7.29e-09!19;CL:0000084!1.03e-08!11;CL:0000827!1.03e-08!11;CL:0000542!5.11e-08!13;CL:0000051!5.11e-08!13;CL:0000791!9.35e-08!9;CL:0000789!9.35e-08!9;CL:0002420!9.35e-08!9;CL:0002419!9.35e-08!9;CL:0000790!9.35e-08!9;CL:0000624!3.71e-07!8;CL:0000763!6.32e-07!16
|ontology_enrichment_celltype_v019_2=CL:0000988,5.06e-28,32;CL:0002032,5.06e-28,32;CL:0000037,5.06e-28,32;CL:0000837,5.06e-28,32;CL:0002320,1.65e-23,46;CL:0000134,1.65e-23,46;CL:0002031,6.20e-22,25;CL:0000838,1.13e-19,12;CL:0000219,5.29e-19,54;CL:0000791,1.23e-18,9;CL:0000789,1.23e-18,9;CL:0002420,1.23e-18,9;CL:0002419,1.23e-18,9;CL:0000790,1.23e-18,9;CL:0000084,4.26e-18,11;CL:0000827,4.26e-18,11;CL:0000542,6.01e-18,13;CL:0000051,6.01e-18,13;CL:0000738,6.35e-18,17;CL:0002087,6.35e-18,17;CL:0000624,5.43e-17,8;CL:0000034,1.47e-14,97;CL:0000893,2.69e-13,6;CL:0002489,2.69e-13,6;CL:0000898,2.69e-13,6;CL:0000809,2.69e-13,6;CL:0000810,2.69e-13,6;CL:0000895,2.69e-13,6;CL:0000808,2.69e-13,6;CL:0000894,2.69e-13,6;CL:0000806,2.69e-13,6;CL:0000807,2.69e-13,6;CL:0000805,2.69e-13,6;CL:0002425,2.69e-13,6;CL:0002436,2.69e-13,6;CL:0002427,2.69e-13,6;CL:0002428,2.69e-13,6;CL:0002429,2.69e-13,6;CL:0002433,2.69e-13,6;CL:0002431,2.69e-13,6;CL:0002432,2.69e-13,6;CL:0000723,2.14e-12,91;CL:0000048,2.14e-12,91;CL:0000049,6.16e-12,19;CL:0000763,1.18e-07,16
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002384!2.10e-12!46
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.65e-23,46
|phase1_expression=0.160148847104794,0.348975407639361,0.909998478779072,0.30246421130683,3.00537437967808,0.503637815735669,0.700837921786577,3.61545305636414,8.024957162645,7.49006484230379,7.0199366972457,4.46724090373884,3.25281386869291,3.84649770643589,0.999329285446988,0.404950534779652,1.39912375625629,1.26184866143295,1.23402990245165,0.84877930359606,0.510259740906419,0.992909512008853,1.56719873483361,0.319984845586813,0.45881856213434,0,0,0.215471232685889,0.190023419456374,0.252030129759931,0.443461021310609,4.44521471421742,2.46025915033828,0,0.288851619751275,0.831173226792462,1.02084678131185,2.92972141515835,0,1.0470474879476,8.2352408324342,4.78131839470912,1.45653105909346,1.6366586336825,0.912392380975631,0.367093504323363,0,0,0.219686182734472,0.194429899074283,0,0,1.67782606057736,3.62681071005672,2.35265659399725,0.514518872071894,0.573066879877513,0,0,0.528990979272033,0,0.338844532069132,0,0.449949858640699,0,0,0.599200221036809,0.384218305321555,0,0,0,0,0,0,0,0,0,0.127687338085188,0.153606533256243,0.131886287730194,0,0,0,0,0.30559649555362,0,0.142371680799103,0,0.075726193333184,0,4.63783181922684,0,3.39985666853875,0,1.29955283489534,0.896053774194671,0.561777680527007,0.340860645156116,0,0,0.14084341977668,0,0,0,0.432982082022428,1.01343946190039,0.505524445014783,0.79928715803342,0.517875767294343,0.29688427812965,0,0,0.461230994512117,0,0,0,0.247194967734374,0.144599356919912,0,0.161766849947409,0,0.969750506270444,0,0.585561594023094,0,0.255457055208591,3.95389910869537,4.79922184794726,2.92261522268049,0.149790639404823,0,0,0.173824320192276,0,0.20778804455956,0,0.101839363850316,0.870848794270651,1.51633655060205,0.420883711772948,0,0,0,0,0,0,0,0.258703370739016,0,0,0.175951124163949,0,0,0.348252166522167,0.205782136407943,0,0.702213187313235,1.80143534980301,1.42081749697796,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0.243206428637567,0,0,0,0,0,0.330418782983798,0,0,0,0.128867461322093,0.201683524623343,0.444756087689741,0.190225626112559,0.474529061544512,0.164698954724011,0.502670417600539,0,0.19496408711912,0,0,0,0,0,0,0,0,0.140271639780637,0.252946148497029,0.147610147979602,0.470996183524124,0.370191491765402,0,0,0.196558995113203,0.449724224769707,0.608580364165509,0.482354319504834,0,0.287696137450811,0.324270453550071,0.823684239564244,0,0,0.624075346229121,0.252578877947112,0.358794827043824,0.964887042726734,0.739012760666419,0,0.162964976442026,0,0,0,0,0.195133647857799,0.157635144106191,0,0.159454768657487,0.327726629431476,0.518054945597687,0.144649058581512,1.50791283939272,1.08781136763742,0.983528546038072,0.551873492609465,0.160550589987792,0.117211686592203,0,0.252470927204373,0,0.390438744296638,0,0,0,0.283076530788832,0,0,0.395287777946524,0,0.283880170416537,0,0,0.329940245945071,1.32745138339963,0,0.302323556964751,0.188605079755898,0.885905678642318,0.922305443831782,1.03371317267288,1.09060118843252,0.356497378384721,0.632073515871632,2.10837217149998,0,3.06395645178409,0,0,0.214337035031592,0.354680467284547,0.535106452806212,0.658196082408484,1.2178597964584,0.704015124191131,0.63549621259146,2.20528398054962,0.49465875882444,0,0.241251699712623,0.119372344003136,0.164140899745061,0.291480836629851,0.370850604021019,0.512612642393558,0,0.185194527369712,0.753473828018764,0.820165366326151,0.228778173206523,2.54967644990783,2.23922323717853,3.04039942369732,0,0,0,0.108005340821801,0,0.87345025498471,0,0.41326727862668,0.26175594198403,0.90730481304255,0.621339313086926,0,0,0,0.388902376688095,0,0,0,0,0.104859344425711,0,0.576060012515731,0,0,0.102710957164827,0,0,0.39736270956253,0.120195449519969,0.295379054349154,0.201932899896295,0.228620419965,0,0,0.192423683280659,0.233753804363138,0,0,0,0,0.19318959403219,0.563047426353546,0.183151624267265,0.428736758158132,1.50471631210609,0,0,0,0.171853182343688,1.37016503954128,0,0,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0,0,0,0.252697211763798,0,0.188626341386076,0.187283014939765,0.0640251524048693,0.0574354689556133,0,0,0.192909220463705,0,0.147198920134397,0,0,0,0.290692833264657,0,0.25384382367503,0.182927972872773,0.263069711437843,0,0.561142271657738,0,0.0985044823755635,0,0,0.578719832943424,0,0,0,0,0.220591419119515,0.231867835620421
|phase1_expression=0.160148847104794,0.348975407639361,0.909998478779072,0.30246421130683,3.00537437967808,0.503637815735669,0.700837921786577,3.61545305636414,8.024957162645,7.49006484230379,7.0199366972457,4.46724090373884,3.25281386869291,3.84649770643589,0.999329285446988,0.404950534779652,1.39912375625629,1.26184866143295,1.23402990245165,0.84877930359606,0.510259740906419,0.992909512008853,1.56719873483361,0.319984845586813,0.45881856213434,0,0,0.215471232685889,0.190023419456374,0.252030129759931,0.443461021310609,4.44521471421742,2.46025915033828,0,0.288851619751275,0.831173226792462,1.02084678131185,2.92972141515835,0,1.0470474879476,8.2352408324342,4.78131839470912,1.45653105909346,1.6366586336825,0.912392380975631,0.367093504323363,0,0,0.219686182734472,0.194429899074283,0,0,1.67782606057736,3.62681071005672,2.35265659399725,0.514518872071894,0.573066879877513,0,0,0.528990979272033,0,0.338844532069132,0,0.449949858640699,0,0,0.599200221036809,0.384218305321555,0,0,0,0,0,0,0,0,0,0.127687338085188,0.153606533256243,0.131886287730194,0,0,0,0,0.30559649555362,0,0.142371680799103,0,0.075726193333184,0,4.63783181922684,0,3.39985666853875,0,1.29955283489534,0.896053774194671,0.561777680527007,0.340860645156116,0,0,0.14084341977668,0,0,0,0.432982082022428,1.01343946190039,0.505524445014783,0.79928715803342,0.517875767294343,0.29688427812965,0,0,0.461230994512117,0,0,0,0.247194967734374,0.144599356919912,0,0.161766849947409,0,0.969750506270444,0,0.585561594023094,0,0.255457055208591,3.95389910869537,4.79922184794726,2.92261522268049,0.149790639404823,0,0,0.173824320192276,0,0.20778804455956,0,0.101839363850316,0.870848794270651,1.51633655060205,0.420883711772948,0,0,0,0,0,0,0,0.258703370739016,0,0,0.175951124163949,0,0,0.348252166522167,0.205782136407943,0,0.702213187313235,1.80143534980301,1.42081749697796,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0.243206428637567,0,0,0,0,0,0.330418782983798,0,0,0,0.128867461322093,0.201683524623343,0.444756087689741,0.190225626112559,0.474529061544512,0.164698954724011,0.502670417600539,0,0.19496408711912,0,0,0,0,0,0,0,0,0.140271639780637,0.252946148497029,0.147610147979602,0.470996183524124,0.370191491765402,0,0,0.196558995113203,0.449724224769707,0.608580364165509,0.482354319504834,0,0.287696137450811,0.324270453550071,0.823684239564244,0,0,0.624075346229121,0.252578877947112,0.358794827043824,0.964887042726734,0.739012760666419,0,0.162964976442026,0,0,0,0,0.195133647857799,0.157635144106191,0,0.159454768657487,0.327726629431476,0.518054945597687,0.144649058581512,1.50791283939272,1.08781136763742,0.983528546038072,0.551873492609465,0.160550589987792,0.117211686592203,0,0.252470927204373,0,0.390438744296638,0,0,0,0.283076530788832,0,0,0.395287777946524,0,0.283880170416537,0,0,0.329940245945071,1.32745138339963,0,0.302323556964751,0.188605079755898,0.885905678642318,0.922305443831782,1.03371317267288,1.09060118843252,0.356497378384721,0.632073515871632,2.10837217149998,0,3.06395645178409,0,0,0.214337035031592,0.354680467284547,0.535106452806212,0.658196082408484,1.2178597964584,0.704015124191131,0.63549621259146,2.20528398054962,0.49465875882444,0,0.241251699712623,0.119372344003136,0.164140899745061,0.291480836629851,0.370850604021019,0.512612642393558,0,0.185194527369712,0.753473828018764,0.820165366326151,0.228778173206523,2.54967644990783,2.23922323717853,3.04039942369732,0,0,0,0.108005340821801,0,0.87345025498471,0,0.41326727862668,0.26175594198403,0.90730481304255,0.621339313086926,0,0,0,0.388902376688095,0,0,0,0,0.104859344425711,0,0.576060012515731,0,0,0.102710957164827,0,0,0.39736270956253,0.120195449519969,0.295379054349154,0.201932899896295,0.228620419965,0,0,0.192423683280659,0.233753804363138,0,0,0,0,0.19318959403219,0.563047426353546,0.183151624267265,0.428736758158132,1.50471631210609,0,0,0,0.171853182343688,1.37016503954128,0,0,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0,0,0,0.252697211763798,0,0.188626341386076,0.187283014939765,0.0640251524048693,0.0574354689556133,0,0,0.192909220463705,0,0.147198920134397,0,0,0,0.290692833264657,0,0.25384382367503,0.182927972872773,0.263069711437843,0,0.561142271657738,0,0.0985044823755635,0,0,0.578719832943424,0,0,0,0,0.220591419119515,0.231867835620421
|short_description=p@chr3:108247192..108247215,+
|short_description=p@chr3:108247192..108247215,+
}}
}}

Latest revision as of 20:57, 5 August 2015

Short description:p@chr3:108247192..108247215, +
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr3:108247192..108247215, +
Coexpression cluster:MCL_coexpression_mm9:231
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p@chr3:108247192..108247215+

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I43.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E93.62
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E78.02
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F27.49
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E67.02
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F14.47
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E43.25
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E83.85
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.26
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.23
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.51
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.99
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.57
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I34.45
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G62.46
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.02
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.93
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G98.24
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H24.78
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.46
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.64
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.91
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.68
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I93.63
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.35
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.64
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C43.40
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.01
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.80
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.95
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D14.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.92
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.87
epididymis, adult.CNhs10490.58-23B21.52
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.80
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.42
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G83.06
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F82.21
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.75
spleen, neonate N20.CNhs11112.824-19H10.82
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.55
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.24
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D33.04
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.41
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.91
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
hematopoietic cell5.06e-2832
hematopoietic oligopotent progenitor cell5.06e-2832
hematopoietic stem cell5.06e-2832
hematopoietic multipotent progenitor cell5.06e-2832
connective tissue cell1.65e-2346
mesenchymal cell1.65e-2346
hematopoietic lineage restricted progenitor cell6.20e-2225
lymphoid lineage restricted progenitor cell1.13e-1912
motile cell5.29e-1954
mature alpha-beta T cell1.23e-189
alpha-beta T cell1.23e-189
immature T cell1.23e-189
mature T cell1.23e-189
immature alpha-beta T cell1.23e-189
T cell4.26e-1811
pro-T cell4.26e-1811
lymphocyte6.01e-1813
common lymphoid progenitor6.01e-1813
leukocyte6.35e-1817
nongranular leukocyte6.35e-1817
CD4-positive, alpha-beta T cell5.43e-178
stem cell1.47e-1497
thymocyte2.69e-136
double negative thymocyte2.69e-136
naive T cell2.69e-136
double-positive, alpha-beta thymocyte2.69e-136
CD4-positive, alpha-beta thymocyte2.69e-136
naive thymus-derived CD4-positive, alpha-beta T cell2.69e-136
DN4 thymocyte2.69e-136
DN1 thymic pro-T cell2.69e-136
DN2 thymocyte2.69e-136
DN3 thymocyte2.69e-136
immature single positive thymocyte2.69e-136
early T lineage precursor2.69e-136
mature CD4 single-positive thymocyte2.69e-136
resting double-positive thymocyte2.69e-136
double-positive blast2.69e-136
CD69-positive double-positive thymocyte2.69e-136
CD69-positive, CD4-positive single-positive thymocyte2.69e-136
CD4-positive, CD8-intermediate double-positive thymocyte2.69e-136
CD24-positive, CD4 single-positive thymocyte2.69e-136
somatic stem cell2.14e-1291
multi fate stem cell2.14e-1291
common myeloid progenitor6.16e-1219
myeloid cell1.18e-0716

Uber anatomy
Ontology termp-valuen
connective tissue1.65e-2346
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr3:108247192..108247215,%2B&oldid=3941124"