FFCP PHASE1:Mm9::chr11:4035357..4035360,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2542 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:4035357..4035360,- | |||
|description=CAGE_peak_at_chr11:4035357..4035360,- | |description=CAGE_peak_at_chr11:4035357..4035360,- | ||
|id=chr11:4035357..4035360,- | |id=chr11:4035357..4035360,- | ||
|ontology_enrichment_celltype=CL:0000540!4.70e-25!33;CL:0000047!4.70e-25!33;CL:0000031!4.70e-25!33;CL:0000404!4.70e-25!33;CL:0000393!7.35e-23!39;CL:0000211!7.35e-23!39;CL:0002319!1.61e-21!43;CL:0000117!1.87e-21!23;CL:0000337!1.87e-21!23;CL:0000221!8.52e-21!44;CL:0000133!8.52e-21!44;CL:0000055!1.13e-19!50;CL:0002321!1.84e-13!70;CL:0000220!1.84e-13!70;CL:0000723!1.25e-08!91;CL:0000048!1.25e-08!91;CL:0000034!3.33e-08!97;CL:0000548!3.04e-07!115;CL:0000004!3.04e-07!115;CL:0000255!3.04e-07!115;CL:0002371!8.60e-07!118 | |ontology_enrichment_celltype=CL:0000540!4.70e-25!33;CL:0000047!4.70e-25!33;CL:0000031!4.70e-25!33;CL:0000404!4.70e-25!33;CL:0000393!7.35e-23!39;CL:0000211!7.35e-23!39;CL:0002319!1.61e-21!43;CL:0000117!1.87e-21!23;CL:0000337!1.87e-21!23;CL:0000221!8.52e-21!44;CL:0000133!8.52e-21!44;CL:0000055!1.13e-19!50;CL:0002321!1.84e-13!70;CL:0000220!1.84e-13!70;CL:0000723!1.25e-08!91;CL:0000048!1.25e-08!91;CL:0000034!3.33e-08!97;CL:0000548!3.04e-07!115;CL:0000004!3.04e-07!115;CL:0000255!3.04e-07!115;CL:0002371!8.60e-07!118 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.74e-45,23;CL:0000337,4.74e-45,23;CL:0000540,5.15e-39,33;CL:0000047,5.15e-39,33;CL:0000031,5.15e-39,33;CL:0000404,5.15e-39,33;CL:0000393,1.35e-32,39;CL:0000211,1.35e-32,39;CL:0002319,2.61e-29,43;CL:0000221,1.40e-28,44;CL:0000133,1.40e-28,44;CL:0002321,1.24e-21,70;CL:0000723,6.16e-14,91;CL:0000048,6.16e-14,91;CL:0002612,7.30e-14,3;CL:0000120,1.32e-13,3;CL:0002613,1.32e-13,3;CL:0000034,6.90e-13,97;CL:0002611,6.74e-10,2;CL:0002293,5.22e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.39e-22!73;UBERON:0005743!2.39e-22!73;UBERON:0000073!2.19e-21!75;UBERON:0001016!2.19e-21!75;UBERON:0004121!3.41e-17!102;UBERON:0000924!3.41e-17!102;UBERON:0006601!3.41e-17!102;UBERON:0002020!1.54e-16!34;UBERON:0002346!3.74e-13!71;UBERON:0003075!3.74e-13!71;UBERON:0007284!3.74e-13!71;UBERON:0001049!3.56e-12!52;UBERON:0005068!3.56e-12!52;UBERON:0006241!3.56e-12!52;UBERON:0007135!3.56e-12!52;UBERON:0002791!3.67e-11!29;UBERON:0003528!3.67e-11!29;UBERON:0001893!3.67e-11!29;UBERON:0003080!1.40e-10!40;UBERON:0000955!3.69e-10!50;UBERON:0006238!3.69e-10!50;UBERON:0002780!6.00e-10!39;UBERON:0001890!6.00e-10!39;UBERON:0006240!6.00e-10!39;UBERON:0003056!7.18e-10!49;UBERON:0002616!1.50e-09!49;UBERON:0000033!1.32e-08!63;UBERON:0001948!5.98e-08!5;UBERON:0002315!5.98e-08!5;UBERON:0000956!5.16e-07!21;UBERON:0001869!5.16e-07!21;UBERON:0000203!5.16e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001948,4.26e-22,5;UBERON:0002315,4.26e-22,5;UBERON:0002240,2.14e-18,6;UBERON:0005174,2.14e-18,6;UBERON:0001137,2.14e-18,6;UBERON:0001017,4.21e-16,73;UBERON:0001016,1.35e-15,75;UBERON:0002257,7.30e-14,3;UBERON:0002020,1.65e-13,34;UBERON:0004121,1.08e-11,95;UBERON:0000924,1.08e-11,95;UBERON:0006601,1.08e-11,95;UBERON:0000073,3.20e-11,54;UBERON:0002256,6.74e-10,2;UBERON:0003076,4.20e-09,12;UBERON:0003057,4.20e-09,12;UBERON:0002420,1.11e-08,8;UBERON:0007245,1.11e-08,8;UBERON:0010009,1.11e-08,8;UBERON:0010011,1.11e-08,8;UBERON:0000454,1.11e-08,8;UBERON:0000369,2.33e-08,5;UBERON:0002435,2.33e-08,5;UBERON:0000204,2.33e-08,5;UBERON:0010082,2.33e-08,5;UBERON:0001049,3.27e-08,52;UBERON:0005068,3.27e-08,52;UBERON:0006241,3.27e-08,52;UBERON:0007135,3.27e-08,52;UBERON:0002346,1.21e-07,64;UBERON:0003075,1.21e-07,64;UBERON:0007284,1.21e-07,64 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0.257259436035947,0.286533439938757,0,2.83243045203437,1.5869729378161,1.26766280701236,0.338844532069132,0,0.449949858640699,0,0.7104801149461,0.299600110518405,0.768436610643109,0.829516898467821,1.21505344498522,0.630974884054146,1.71390590642282,2.87129103237098,1.22490799214954,0.766763768145891,0,0,1.65993539510744,1.22885226604995,3.16527090552465,2.56165402086747,1.04182674111352,1.11673199600552,0,0.763991238884051,1.47314292736834,2.98980529678116,2.23679334990361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.54805239706646,7.11066703153331,0,0,0,0,0,0,0.173485326766136,0.304465478312141,0,0,0.117588707135705,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0.299581278809645,0,0.251308704225729,0,0,0,0,0.203678727700633,0,0.505445516867349,0,0,0.459804208866946,0,0,0.0680364991513279,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0,0,1.08781136763742,0,0,0,0,0,0,1.26203287766503,0.780877488593277,0,0.477937595905104,0.445597348164788,0.283076530788832,1.21443210502468,0.292255857911312,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0.614870295887855,0,0,0,0,0,0,0,0.36012218806262,0,0.428674070063185,0,0,0,0.608929898229199,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188368457004691,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0.56369293868419,0,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0.665957860122194,0,0,0,0,0,0,0,0.564751842617067,0.460325236507177,0,0.343706364687375,0,0.755393897389701,0,0.45032120322422,0.453142408984205,0,0.103787347584177,0,0,0,0,0,0,0,0.320919209591815,0,0,0.377252682772152,0.187283014939765,0,0.114870937911227,0,0.231768651889711,0,0,0.147198920134397,0,0,0,0,0.0941093804153306,0.169229215783353,0,0,0,0,0.355905054372522,0,0,0,0.192906610981141,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0.257259436035947,0.286533439938757,0,2.83243045203437,1.5869729378161,1.26766280701236,0.338844532069132,0,0.449949858640699,0,0.7104801149461,0.299600110518405,0.768436610643109,0.829516898467821,1.21505344498522,0.630974884054146,1.71390590642282,2.87129103237098,1.22490799214954,0.766763768145891,0,0,1.65993539510744,1.22885226604995,3.16527090552465,2.56165402086747,1.04182674111352,1.11673199600552,0,0.763991238884051,1.47314292736834,2.98980529678116,2.23679334990361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.54805239706646,7.11066703153331,0,0,0,0,0,0,0.173485326766136,0.304465478312141,0,0,0.117588707135705,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0.299581278809645,0,0.251308704225729,0,0,0,0,0.203678727700633,0,0.505445516867349,0,0,0.459804208866946,0,0,0.0680364991513279,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0,0,1.08781136763742,0,0,0,0,0,0,1.26203287766503,0.780877488593277,0,0.477937595905104,0.445597348164788,0.283076530788832,1.21443210502468,0.292255857911312,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0.614870295887855,0,0,0,0,0,0,0,0.36012218806262,0,0.428674070063185,0,0,0,0.608929898229199,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188368457004691,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0.56369293868419,0,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0.665957860122194,0,0,0,0,0,0,0,0.564751842617067,0.460325236507177,0,0.343706364687375,0,0.755393897389701,0,0.45032120322422,0.453142408984205,0,0.103787347584177,0,0,0,0,0,0,0,0.320919209591815,0,0,0.377252682772152,0.187283014939765,0,0.114870937911227,0,0.231768651889711,0,0,0.147198920134397,0,0,0,0,0.0941093804153306,0.169229215783353,0,0,0,0,0.355905054372522,0,0,0,0.192906610981141,0,0,0,0,0,0 | ||
|short_description=p@chr11:4035357..4035360,- | |short_description=p@chr11:4035357..4035360,- | ||
}} | }} |
Latest revision as of 21:32, 5 August 2015
Short description: | p@chr11:4035357..4035360, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:4035357..4035360, - |
Coexpression cluster: | MCL_coexpression_mm9:2542 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.74e-45 | 23 |
neuroblast (sensu Vertebrata) | 4.74e-45 | 23 |
neuron | 5.15e-39 | 33 |
neuronal stem cell | 5.15e-39 | 33 |
neuroblast | 5.15e-39 | 33 |
electrically signaling cell | 5.15e-39 | 33 |
electrically responsive cell | 1.35e-32 | 39 |
electrically active cell | 1.35e-32 | 39 |
neural cell | 2.61e-29 | 43 |
ectodermal cell | 1.40e-28 | 44 |
neurectodermal cell | 1.40e-28 | 44 |
embryonic cell | 1.24e-21 | 70 |
somatic stem cell | 6.16e-14 | 91 |
multi fate stem cell | 6.16e-14 | 91 |
neuron of the ventral spinal cord | 7.30e-14 | 3 |
granule cell | 1.32e-13 | 3 |
striatum neuron | 1.32e-13 | 3 |
stem cell | 6.90e-13 | 97 |
neuron of the dorsal spinal cord | 6.74e-10 | 2 |
epithelial cell of thymus | 5.22e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
regional part of spinal cord | 4.26e-22 | 5 |
gray matter of spinal cord | 4.26e-22 | 5 |
spinal cord | 2.14e-18 | 6 |
dorsal region element | 2.14e-18 | 6 |
dorsum | 2.14e-18 | 6 |
central nervous system | 4.21e-16 | 73 |
nervous system | 1.35e-15 | 75 |
ventral horn of spinal cord | 7.30e-14 | 3 |
gray matter | 1.65e-13 | 34 |
ectoderm-derived structure | 1.08e-11 | 95 |
ectoderm | 1.08e-11 | 95 |
presumptive ectoderm | 1.08e-11 | 95 |
regional part of nervous system | 3.20e-11 | 54 |
dorsal horn of spinal cord | 6.74e-10 | 2 |
posterior neural tube | 4.20e-09 | 12 |
chordal neural plate | 4.20e-09 | 12 |
basal ganglion | 1.11e-08 | 8 |
nuclear complex of neuraxis | 1.11e-08 | 8 |
aggregate regional part of brain | 1.11e-08 | 8 |
collection of basal ganglia | 1.11e-08 | 8 |
cerebral subcortex | 1.11e-08 | 8 |
corpus striatum | 2.33e-08 | 5 |
striatum | 2.33e-08 | 5 |
ventral part of telencephalon | 2.33e-08 | 5 |
future corpus striatum | 2.33e-08 | 5 |
neural tube | 3.27e-08 | 52 |
neural rod | 3.27e-08 | 52 |
future spinal cord | 3.27e-08 | 52 |
neural keel | 3.27e-08 | 52 |
neurectoderm | 1.21e-07 | 64 |
neural plate | 1.21e-07 | 64 |
presumptive neural plate | 1.21e-07 | 64 |