Personal tools

FFCP PHASE1:Mm9::chr11:53113386..53113397,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=NA
|EntrezGene=NA
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|association_with_transcript=NA
|cluster_id=chr11:53113386..53113397,+
|description=CAGE_peak_at_chr11:53113386..53113397,+
|description=CAGE_peak_at_chr11:53113386..53113397,+
|id=chr11:53113386..53113397,+
|id=chr11:53113386..53113397,+
|ontology_enrichment_celltype=CL:0000063!1.64e-15!66;CL:0000219!5.44e-15!54;CL:0002320!1.73e-14!46;CL:0000134!1.73e-14!46;CL:0000988!9.56e-12!32;CL:0002032!9.56e-12!32;CL:0000037!9.56e-12!32;CL:0000566!9.56e-12!32;CL:0000837!9.56e-12!32;CL:0000144!3.96e-10!121;CL:0000012!3.96e-10!121;CL:0002371!6.46e-09!118;CL:0002031!1.55e-08!25;CL:0000034!4.94e-08!97;CL:0000548!1.38e-07!115;CL:0000004!1.38e-07!115;CL:0000255!1.38e-07!115;CL:0000723!3.76e-07!91;CL:0000048!3.76e-07!91;CL:0000049!7.88e-07!19
|ontology_enrichment_celltype=CL:0000063!1.64e-15!66;CL:0000219!5.44e-15!54;CL:0002320!1.73e-14!46;CL:0000134!1.73e-14!46;CL:0000988!9.56e-12!32;CL:0002032!9.56e-12!32;CL:0000037!9.56e-12!32;CL:0000566!9.56e-12!32;CL:0000837!9.56e-12!32;CL:0000144!3.96e-10!121;CL:0000012!3.96e-10!121;CL:0002371!6.46e-09!118;CL:0002031!1.55e-08!25;CL:0000034!4.94e-08!97;CL:0000548!1.38e-07!115;CL:0000004!1.38e-07!115;CL:0000255!1.38e-07!115;CL:0000723!3.76e-07!91;CL:0000048!3.76e-07!91;CL:0000049!7.88e-07!19
|ontology_enrichment_celltype_v019_2=CL:0000988,4.18e-21,32;CL:0002032,4.18e-21,32;CL:0000037,4.18e-21,32;CL:0000837,4.18e-21,32;CL:0002320,4.00e-20,46;CL:0000134,4.00e-20,46;CL:0000219,1.07e-19,54;CL:0000034,1.37e-15,97;CL:0002031,9.18e-15,25;CL:0000723,1.77e-13,91;CL:0000048,1.77e-13,91;CL:0000791,1.29e-12,9;CL:0000789,1.29e-12,9;CL:0002420,1.29e-12,9;CL:0002419,1.29e-12,9;CL:0000790,1.29e-12,9;CL:0000738,5.71e-12,17;CL:0002087,5.71e-12,17;CL:0000838,7.37e-12,12;CL:0000893,1.51e-11,6;CL:0002489,1.51e-11,6;CL:0000898,1.51e-11,6;CL:0000809,1.51e-11,6;CL:0000810,1.51e-11,6;CL:0000895,1.51e-11,6;CL:0000808,1.51e-11,6;CL:0000894,1.51e-11,6;CL:0000806,1.51e-11,6;CL:0000807,1.51e-11,6;CL:0000805,1.51e-11,6;CL:0002425,1.51e-11,6;CL:0002436,1.51e-11,6;CL:0002427,1.51e-11,6;CL:0002428,1.51e-11,6;CL:0002429,1.51e-11,6;CL:0002433,1.51e-11,6;CL:0002431,1.51e-11,6;CL:0002432,1.51e-11,6;CL:0000049,2.14e-11,19;CL:0000624,2.62e-11,8;CL:0000542,8.22e-11,13;CL:0000051,8.22e-11,13;CL:0000084,4.55e-10,11;CL:0000827,4.55e-10,11;CL:0000763,3.71e-07,16
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=DOID:0060100,7.10e-08,3;DOID:4045,7.10e-08,3
|ontology_enrichment_uberon=UBERON:0002384!1.73e-14!46;UBERON:0002204!2.74e-10!32;UBERON:0002371!4.62e-08!16
|ontology_enrichment_uberon=UBERON:0002384!1.73e-14!46;UBERON:0002204!2.74e-10!32;UBERON:0002371!4.62e-08!16
|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.00e-20,46;UBERON:0002204,1.37e-11,32;UBERON:0002371,2.59e-11,16;UBERON:0002193,2.13e-09,48;UBERON:0002405,2.13e-09,48;UBERON:0002390,3.94e-09,45;UBERON:0003061,3.94e-09,45;UBERON:0001474,1.21e-07,22;UBERON:0004765,1.21e-07,22;UBERON:0001434,1.21e-07,22
|phase1_expression=0.160148847104794,1.04692622291808,0.454999239389536,0.60492842261366,1.00179145989269,0.671517087647559,0.700837921786577,1.29123323441576,3.66050677594334,2.34064526321993,1.02730780935303,1.43589886191606,1.36960583944965,1.57356724354195,0.666219523631325,0.607425802169478,1.39912375625629,3.15462165358238,1.64537320326887,2.54633791078818,0.0850432901510698,0.198581902401771,0.261199789138935,0.799962113967033,0.91763712426868,0,0,0.646413698057667,0.570070258369122,0,0,0.635030673459631,0,0,0.577703239502549,0.997407872150954,1.22501613757421,8.37063261473815,7.0320181007142,6.28228492768558,10.5881667845583,10.9287277593351,2.42755176515577,0.881277725829041,0.709638518536602,1.65192076945513,3.12956537739216,0.436050312760893,0.439372365468944,0.388859798148567,0.139986421625363,1.43752564364972,5.36904339384756,0.725362142011344,1.00828139742739,1.28629718017973,0.286533439938757,0.515672092277442,0.202316460859598,0,0,0.677689064138264,0.889294796111139,2.2497492932035,0.988866362566974,2.1314403448383,1.79760066311043,1.53687322128622,0,0.135005938331691,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0.142371680799103,0,0.151452386666368,0,2.89864488701678,0.860423876981386,0.679971333707751,1.07940638327563,0,0.896053774194671,0.280888840263504,0.511290967734173,0,0,0.281686839553361,1.28326477414318,0,0,0.216491041011214,0.506719730950197,0,1.1418387971906,1.03575153458869,0.29688427812965,0.173485326766136,0,0.230615497256059,0.301445281105245,0,0.251333182659351,0.741584903203122,0.433798070759735,0,0.161766849947409,0.441683036920787,0,0,0,0.209446706813455,0,2.39630249011841,3.59941638596045,2.28726408731516,0,0,0.125654352112864,0,0,0,0.162241263067758,0,0.622034853050465,0.758168275301024,0.210441855886474,0,0,0.180062129805349,0,0.0680364991513279,0.2562274405697,0,0.258703370739016,0,0,0,0.219195732427575,0.278047249225598,0.348252166522167,0,0.199034266818493,3.51106593656617,1.80143534980301,0.568326998791185,0.414251545071004,0.234526059981096,0,0.23674473558521,0,0.154267112887378,0,0,0.116765342367169,0,0.164167464079095,0,0.292399974850665,0,0.268412837520744,0,0,0.991256348951394,0.264450566663544,0.213288250535234,0,0,0,0.22237804384487,0,0,0,0.502670417600539,0,0.19496408711912,0,0.216138049874694,0.398282546508734,0,0.114248512609729,0,0,0,0.350679099451593,0.252946148497029,0.147610147979602,0,0.493588655687202,0.889357881261447,0,0,0.449724224769707,0,0.241177159752417,0,0.575392274901621,0.486405680325106,0,0,0.372140947668503,1.24815069245824,0,0.717589654087649,0.964887042726734,0.554259570499814,0.37898282354097,0.162964976442026,0,0,0,0.238043640886014,0.390267295715598,0.472905432318573,0.44292937929755,0.318909537314974,0.327726629431476,0.345369963731791,0.578596234326046,0,0.54390568381871,0.491764273019036,0.551873492609465,0,0,0.327869890753351,0.757412781613119,0.315508219416257,0,0,0.238968797952552,0.222798674082394,0,0,0,0,0,0.567760340833074,0.35613120733451,0.325773918707152,0.329940245945071,0,0,0,0.188605079755898,0.295301892880773,0,0.258428293168221,0.727067458955011,0.356497378384721,0.316036757935816,0,0,0.340439605753788,0,0.129358683782755,0.428674070063185,0,0.178368817602071,0,0,0.469343416127421,1.0591603543191,0.661585194164886,0.16488625294148,0.322928853391811,0.241251699712623,0.358117032009409,0,0.291480836629851,0,0.512612642393558,0.206386867963223,0,0.565105371014073,0,0.457556346413045,1.01987057996313,1.6794174278839,1.52019971184866,0,0,0,0,0,0,0.134864346384821,0.247960367176008,0,0.388844919875379,0.621339313086926,0,0,0.165458490457098,0,0.129159823477731,0.337912250981556,0.234714477291508,0,0.314578033277133,0,0,0.316011120628178,0.202725215290164,0,0,0,0.39736270956253,0,0,0,0,0.201652370273681,0,0.0962118416403295,0,0.226730383615211,0,0.179427713218951,0.335769232728157,0.19318959403219,0.93841237725591,0.36630324853453,1.07184189539533,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0.209613162627982,0,0.222246727801615,0.412070114477788,0,0,0.25347929989024,0,0,0.128050304809739,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0.355905054372522,0.197008964751127,0,0.154936841185966,0.192906610981141,0,0.233931608445408,0.429742108096597,0.382576664137687,0.220591419119515,0
|phase1_expression=0.160148847104794,1.04692622291808,0.454999239389536,0.60492842261366,1.00179145989269,0.671517087647559,0.700837921786577,1.29123323441576,3.66050677594334,2.34064526321993,1.02730780935303,1.43589886191606,1.36960583944965,1.57356724354195,0.666219523631325,0.607425802169478,1.39912375625629,3.15462165358238,1.64537320326887,2.54633791078818,0.0850432901510698,0.198581902401771,0.261199789138935,0.799962113967033,0.91763712426868,0,0,0.646413698057667,0.570070258369122,0,0,0.635030673459631,0,0,0.577703239502549,0.997407872150954,1.22501613757421,8.37063261473815,7.0320181007142,6.28228492768558,10.5881667845583,10.9287277593351,2.42755176515577,0.881277725829041,0.709638518536602,1.65192076945513,3.12956537739216,0.436050312760893,0.439372365468944,0.388859798148567,0.139986421625363,1.43752564364972,5.36904339384756,0.725362142011344,1.00828139742739,1.28629718017973,0.286533439938757,0.515672092277442,0.202316460859598,0,0,0.677689064138264,0.889294796111139,2.2497492932035,0.988866362566974,2.1314403448383,1.79760066311043,1.53687322128622,0,0.135005938331691,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0.142371680799103,0,0.151452386666368,0,2.89864488701678,0.860423876981386,0.679971333707751,1.07940638327563,0,0.896053774194671,0.280888840263504,0.511290967734173,0,0,0.281686839553361,1.28326477414318,0,0,0.216491041011214,0.506719730950197,0,1.1418387971906,1.03575153458869,0.29688427812965,0.173485326766136,0,0.230615497256059,0.301445281105245,0,0.251333182659351,0.741584903203122,0.433798070759735,0,0.161766849947409,0.441683036920787,0,0,0,0.209446706813455,0,2.39630249011841,3.59941638596045,2.28726408731516,0,0,0.125654352112864,0,0,0,0.162241263067758,0,0.622034853050465,0.758168275301024,0.210441855886474,0,0,0.180062129805349,0,0.0680364991513279,0.2562274405697,0,0.258703370739016,0,0,0,0.219195732427575,0.278047249225598,0.348252166522167,0,0.199034266818493,3.51106593656617,1.80143534980301,0.568326998791185,0.414251545071004,0.234526059981096,0,0.23674473558521,0,0.154267112887378,0,0,0.116765342367169,0,0.164167464079095,0,0.292399974850665,0,0.268412837520744,0,0,0.991256348951394,0.264450566663544,0.213288250535234,0,0,0,0.22237804384487,0,0,0,0.502670417600539,0,0.19496408711912,0,0.216138049874694,0.398282546508734,0,0.114248512609729,0,0,0,0.350679099451593,0.252946148497029,0.147610147979602,0,0.493588655687202,0.889357881261447,0,0,0.449724224769707,0,0.241177159752417,0,0.575392274901621,0.486405680325106,0,0,0.372140947668503,1.24815069245824,0,0.717589654087649,0.964887042726734,0.554259570499814,0.37898282354097,0.162964976442026,0,0,0,0.238043640886014,0.390267295715598,0.472905432318573,0.44292937929755,0.318909537314974,0.327726629431476,0.345369963731791,0.578596234326046,0,0.54390568381871,0.491764273019036,0.551873492609465,0,0,0.327869890753351,0.757412781613119,0.315508219416257,0,0,0.238968797952552,0.222798674082394,0,0,0,0,0,0.567760340833074,0.35613120733451,0.325773918707152,0.329940245945071,0,0,0,0.188605079755898,0.295301892880773,0,0.258428293168221,0.727067458955011,0.356497378384721,0.316036757935816,0,0,0.340439605753788,0,0.129358683782755,0.428674070063185,0,0.178368817602071,0,0,0.469343416127421,1.0591603543191,0.661585194164886,0.16488625294148,0.322928853391811,0.241251699712623,0.358117032009409,0,0.291480836629851,0,0.512612642393558,0.206386867963223,0,0.565105371014073,0,0.457556346413045,1.01987057996313,1.6794174278839,1.52019971184866,0,0,0,0,0,0,0.134864346384821,0.247960367176008,0,0.388844919875379,0.621339313086926,0,0,0.165458490457098,0,0.129159823477731,0.337912250981556,0.234714477291508,0,0.314578033277133,0,0,0.316011120628178,0.202725215290164,0,0,0,0.39736270956253,0,0,0,0,0.201652370273681,0,0.0962118416403295,0,0.226730383615211,0,0.179427713218951,0.335769232728157,0.19318959403219,0.93841237725591,0.36630324853453,1.07184189539533,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0.209613162627982,0,0.222246727801615,0.412070114477788,0,0,0.25347929989024,0,0,0.128050304809739,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0.355905054372522,0.197008964751127,0,0.154936841185966,0.192906610981141,0,0.233931608445408,0.429742108096597,0.382576664137687,0.220591419119515,0
|short_description=p@chr11:53113386..53113397,+
|short_description=p@chr11:53113386..53113397,+
}}
}}

Latest revision as of 01:30, 6 August 2015

Short description:p@chr11:53113386..53113397, +
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr11:53113386..53113397, +
Coexpression cluster:NA
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p@chr11:53113386..53113397+

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.67
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.29
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.66
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.03
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.44
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.37
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.57
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.15
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.65
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.55
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.92
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.23
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G88.37
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H17.03
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H36.28
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G910.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H210.93
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H42.43
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.88
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.71
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.65
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A25.37
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.01
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.29
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.25
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.13
Mouse Microglia, donor1.CNhs12629.11718-123C81.80
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.90
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.14
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.40
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.29
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.62
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.07
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C83.51
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.80
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.99
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.35
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B91.25
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.72
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G31.06
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.02
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.52
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.94
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.13
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
hematopoietic cell4.18e-2132
hematopoietic oligopotent progenitor cell4.18e-2132
hematopoietic stem cell4.18e-2132
hematopoietic multipotent progenitor cell4.18e-2132
connective tissue cell4.00e-2046
mesenchymal cell4.00e-2046
motile cell1.07e-1954
stem cell1.37e-1597
hematopoietic lineage restricted progenitor cell9.18e-1525
somatic stem cell1.77e-1391
multi fate stem cell1.77e-1391
mature alpha-beta T cell1.29e-129
alpha-beta T cell1.29e-129
immature T cell1.29e-129
mature T cell1.29e-129
immature alpha-beta T cell1.29e-129
leukocyte5.71e-1217
nongranular leukocyte5.71e-1217
lymphoid lineage restricted progenitor cell7.37e-1212
thymocyte1.51e-116
double negative thymocyte1.51e-116
naive T cell1.51e-116
double-positive, alpha-beta thymocyte1.51e-116
CD4-positive, alpha-beta thymocyte1.51e-116
naive thymus-derived CD4-positive, alpha-beta T cell1.51e-116
DN4 thymocyte1.51e-116
DN1 thymic pro-T cell1.51e-116
DN2 thymocyte1.51e-116
DN3 thymocyte1.51e-116
immature single positive thymocyte1.51e-116
early T lineage precursor1.51e-116
mature CD4 single-positive thymocyte1.51e-116
resting double-positive thymocyte1.51e-116
double-positive blast1.51e-116
CD69-positive double-positive thymocyte1.51e-116
CD69-positive, CD4-positive single-positive thymocyte1.51e-116
CD4-positive, CD8-intermediate double-positive thymocyte1.51e-116
CD24-positive, CD4 single-positive thymocyte1.51e-116
common myeloid progenitor2.14e-1119
CD4-positive, alpha-beta T cell2.62e-118
lymphocyte8.22e-1113
common lymphoid progenitor8.22e-1113
T cell4.55e-1011
pro-T cell4.55e-1011
myeloid cell3.71e-0716

Uber anatomy
Ontology termp-valuen
connective tissue4.00e-2046
musculoskeletal system1.37e-1132
bone marrow2.59e-1116
hemolymphoid system2.13e-0948
immune system2.13e-0948
hematopoietic system3.94e-0945
blood island3.94e-0945
bone element1.21e-0722
skeletal element1.21e-0722
skeletal system1.21e-0722

Disease
Ontology termp-valuen
musculoskeletal system cancer7.10e-083
muscle cancer7.10e-083
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr11:53113386..53113397,%2B&oldid=3964100"