FFCP PHASE1:Mm9::chr8:126881132..126881144,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=370 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000082730_5end | |association_with_transcript=0bp_to_ENSMUST00000082730_5end | ||
|cluster_id=chr8:126881132..126881144,+ | |||
|description=CAGE_peak_1_at_ENSMUST00000082730_5end | |description=CAGE_peak_1_at_ENSMUST00000082730_5end | ||
|id=chr8:126881132..126881144,+ | |id=chr8:126881132..126881144,+ | ||
|ontology_enrichment_celltype=CL:0002371!6.85e-44!118;CL:0000548!1.94e-43!115;CL:0000004!1.94e-43!115;CL:0000255!1.94e-43!115;CL:0000144!7.06e-43!121;CL:0000012!7.06e-43!121;CL:0000723!6.64e-36!91;CL:0000048!6.64e-36!91;CL:0000034!1.01e-35!97;CL:0002321!3.68e-28!70;CL:0000220!3.68e-28!70;CL:0000055!1.70e-22!50;CL:0000221!8.22e-22!44;CL:0000133!8.22e-22!44;CL:0002319!9.54e-22!43;CL:0000540!1.05e-18!33;CL:0000047!1.05e-18!33;CL:0000031!1.05e-18!33;CL:0000404!1.05e-18!33;CL:0000393!1.61e-18!39;CL:0000211!1.61e-18!39;CL:0000063!2.23e-17!66;CL:0000219!2.36e-16!54;CL:0002320!6.80e-14!46;CL:0000134!6.80e-14!46;CL:0000117!1.55e-13!23;CL:0000337!1.55e-13!23;CL:0002031!4.15e-09!25;CL:0000988!1.51e-08!32;CL:0002032!1.51e-08!32;CL:0000037!1.51e-08!32;CL:0000566!1.51e-08!32;CL:0000837!1.51e-08!32 | |ontology_enrichment_celltype=CL:0002371!6.85e-44!118;CL:0000548!1.94e-43!115;CL:0000004!1.94e-43!115;CL:0000255!1.94e-43!115;CL:0000144!7.06e-43!121;CL:0000012!7.06e-43!121;CL:0000723!6.64e-36!91;CL:0000048!6.64e-36!91;CL:0000034!1.01e-35!97;CL:0002321!3.68e-28!70;CL:0000220!3.68e-28!70;CL:0000055!1.70e-22!50;CL:0000221!8.22e-22!44;CL:0000133!8.22e-22!44;CL:0002319!9.54e-22!43;CL:0000540!1.05e-18!33;CL:0000047!1.05e-18!33;CL:0000031!1.05e-18!33;CL:0000404!1.05e-18!33;CL:0000393!1.61e-18!39;CL:0000211!1.61e-18!39;CL:0000063!2.23e-17!66;CL:0000219!2.36e-16!54;CL:0002320!6.80e-14!46;CL:0000134!6.80e-14!46;CL:0000117!1.55e-13!23;CL:0000337!1.55e-13!23;CL:0002031!4.15e-09!25;CL:0000988!1.51e-08!32;CL:0002032!1.51e-08!32;CL:0000037!1.51e-08!32;CL:0000566!1.51e-08!32;CL:0000837!1.51e-08!32 | ||
|ontology_enrichment_celltype_v019_2=CL:0000723,2.12e-23,91;CL:0000048,2.12e-23,91;CL:0002321,1.01e-21,70;CL:0000034,3.95e-21,97;CL:0000393,3.38e-19,39;CL:0000211,3.38e-19,39;CL:0002319,5.52e-19,43;CL:0000221,2.32e-18,44;CL:0000133,2.32e-18,44;CL:0000540,7.54e-18,33;CL:0000047,7.54e-18,33;CL:0000031,7.54e-18,33;CL:0000404,7.54e-18,33;CL:0000117,5.51e-15,23;CL:0000337,5.51e-15,23;CL:0000839,7.25e-09,13;CL:0000219,3.00e-08,54;CL:0000050,5.65e-07,9;CL:0002320,7.54e-07,46;CL:0000134,7.54e-07,46;CL:0000763,8.94e-07,16 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!9.60e-16!75;UBERON:0001016!9.60e-16!75;UBERON:0001017!1.85e-15!73;UBERON:0005743!1.85e-15!73;UBERON:0002384!6.80e-14!46;UBERON:0002020!6.87e-14!34;UBERON:0002791!1.10e-11!29;UBERON:0003528!1.10e-11!29;UBERON:0001893!1.10e-11!29;UBERON:0000956!1.07e-10!21;UBERON:0001869!1.07e-10!21;UBERON:0000203!1.07e-10!21;UBERON:0002619!4.41e-10!17;UBERON:0002021!1.38e-09!10;UBERON:0000411!1.38e-09!10;UBERON:0001950!1.38e-09!10;UBERON:0004121!1.01e-08!102;UBERON:0000924!1.01e-08!102;UBERON:0006601!1.01e-08!102;UBERON:0002616!3.12e-07!49;UBERON:0001049!3.45e-07!52;UBERON:0005068!3.45e-07!52;UBERON:0006241!3.45e-07!52;UBERON:0007135!3.45e-07!52;UBERON:0000955!6.71e-07!50;UBERON:0006238!6.71e-07!50 | |ontology_enrichment_uberon=UBERON:0000073!9.60e-16!75;UBERON:0001016!9.60e-16!75;UBERON:0001017!1.85e-15!73;UBERON:0005743!1.85e-15!73;UBERON:0002384!6.80e-14!46;UBERON:0002020!6.87e-14!34;UBERON:0002791!1.10e-11!29;UBERON:0003528!1.10e-11!29;UBERON:0001893!1.10e-11!29;UBERON:0000956!1.07e-10!21;UBERON:0001869!1.07e-10!21;UBERON:0000203!1.07e-10!21;UBERON:0002619!4.41e-10!17;UBERON:0002021!1.38e-09!10;UBERON:0000411!1.38e-09!10;UBERON:0001950!1.38e-09!10;UBERON:0004121!1.01e-08!102;UBERON:0000924!1.01e-08!102;UBERON:0006601!1.01e-08!102;UBERON:0002616!3.12e-07!49;UBERON:0001049!3.45e-07!52;UBERON:0005068!3.45e-07!52;UBERON:0006241!3.45e-07!52;UBERON:0007135!3.45e-07!52;UBERON:0000955!6.71e-07!50;UBERON:0006238!6.71e-07!50 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.55e-19,73;UBERON:0001016,1.03e-18,75;UBERON:0003528,4.43e-17,29;UBERON:0002791,4.43e-17,29;UBERON:0001893,4.43e-17,29;UBERON:0002020,1.88e-16,34;UBERON:0002021,1.66e-14,10;UBERON:0000411,1.66e-14,10;UBERON:0001950,1.66e-14,10;UBERON:0000956,2.14e-14,21;UBERON:0001869,2.14e-14,21;UBERON:0000203,2.14e-14,21;UBERON:0002619,2.74e-14,17;UBERON:0000073,2.27e-13,54;UBERON:0004121,1.81e-12,95;UBERON:0000924,1.81e-12,95;UBERON:0006601,1.81e-12,95;UBERON:0002780,4.08e-11,39;UBERON:0001890,4.08e-11,39;UBERON:0006240,4.08e-11,39;UBERON:0002616,9.74e-11,46;UBERON:0003080,1.09e-10,40;UBERON:0001049,1.39e-10,52;UBERON:0005068,1.39e-10,52;UBERON:0006241,1.39e-10,52;UBERON:0007135,1.39e-10,52;UBERON:0000955,2.26e-10,47;UBERON:0006238,2.26e-10,47;UBERON:0002346,3.66e-09,64;UBERON:0003075,3.66e-09,64;UBERON:0007284,3.66e-09,64;UBERON:0003056,1.13e-07,49;UBERON:0010371,3.65e-07,73;UBERON:0002384,7.54e-07,46 | |||
|phase1_expression=0.160148847104794,0.348975407639361,1.36499771816861,0.30246421130683,0,0.33575854382378,0.467225281191051,1.29123323441576,0.422366166455,0.70219357896598,0.513653904676515,0.239316476986009,1.19840510951844,0.611942816932982,1.33243904726265,0,2.09868563438444,1.89277299214943,1.37114433605739,6.79023442876848,0.0850432901510698,0.496454756004426,0.261199789138935,0,0.22940928106717,0.57423196411502,0,0.215471232685889,0.380046838912748,0,0.221730510655305,26.6712882853045,9.84103660135312,0,1.1554064790051,0.997407872150954,0.408338712524738,0.418531630736908,0.7813353445238,0,1.76469446409304,2.04913645487534,0.485510353031154,0,0,0,5.47673941043627,1.74420125104357,0.878744730937887,1.74986909166855,1.39986421625363,0,0.167782606057736,0,0.672187598284928,3.08711323243136,5.73066879877513,6.70373719960675,2.02316460859598,17.4567023159771,3.80298842103708,0.677689064138264,2.66788438833342,0.899899717281399,5.93319817540185,7.104801149461,1.49800055259202,0.384218305321555,0.311068836925433,7.1553147315796,1.26194976810829,0.856952953211411,1.54607978666129,1.71487118900936,2.30029130443767,1.83843757322004,4.40463523997555,2.68143409978894,1.99688493233117,3.69281605644543,3.38504281328916,2.08365348222704,1.95428099300967,0,3.20876320331301,0.883885756421003,0.569486723196412,1.3047961207771,0.075726193333184,0.0755715601067855,0.289864488701678,2.58127163094416,1.3599426674155,1.61910957491345,5.19821133958135,4.03224198387602,0,0,0.779358013808606,0,0.14084341977668,1.28326477414318,0,0,1.08245520505607,0.760079596425296,1.51657333504435,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0.359445373517761,0.599902730993408,0.635351135365324,0,0,0,0,0,0,0,0,0,0,0,0,0.229902104433473,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0.207125772535502,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0,1.79763881730844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5553898757491,1.08781136763742,0,0,0,0,0,0,0.631016438832513,2.73307121007647,4.73931475012158,2.15071918157297,4.01037613348309,1.69845918473299,0.404810701674894,0.876767573733936,1.58115111178609,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0,0,0,0.169978429993855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0.226730383615211,0.221985953374065,0.448569283047378,0.167884616364078,0,0,0,0,0,5.64751842617067,2.76195141904306,6.87474616127276,4.29632955859219,4.7955776383945,8.3093328712867,4.72515750162264,3.60256962579376,4.07828168085784,5.69536342927002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.160148847104794,0.348975407639361,1.36499771816861,0.30246421130683,0,0.33575854382378,0.467225281191051,1.29123323441576,0.422366166455,0.70219357896598,0.513653904676515,0.239316476986009,1.19840510951844,0.611942816932982,1.33243904726265,0,2.09868563438444,1.89277299214943,1.37114433605739,6.79023442876848,0.0850432901510698,0.496454756004426,0.261199789138935,0,0.22940928106717,0.57423196411502,0,0.215471232685889,0.380046838912748,0,0.221730510655305,26.6712882853045,9.84103660135312,0,1.1554064790051,0.997407872150954,0.408338712524738,0.418531630736908,0.7813353445238,0,1.76469446409304,2.04913645487534,0.485510353031154,0,0,0,5.47673941043627,1.74420125104357,0.878744730937887,1.74986909166855,1.39986421625363,0,0.167782606057736,0,0.672187598284928,3.08711323243136,5.73066879877513,6.70373719960675,2.02316460859598,17.4567023159771,3.80298842103708,0.677689064138264,2.66788438833342,0.899899717281399,5.93319817540185,7.104801149461,1.49800055259202,0.384218305321555,0.311068836925433,7.1553147315796,1.26194976810829,0.856952953211411,1.54607978666129,1.71487118900936,2.30029130443767,1.83843757322004,4.40463523997555,2.68143409978894,1.99688493233117,3.69281605644543,3.38504281328916,2.08365348222704,1.95428099300967,0,3.20876320331301,0.883885756421003,0.569486723196412,1.3047961207771,0.075726193333184,0.0755715601067855,0.289864488701678,2.58127163094416,1.3599426674155,1.61910957491345,5.19821133958135,4.03224198387602,0,0,0.779358013808606,0,0.14084341977668,1.28326477414318,0,0,1.08245520505607,0.760079596425296,1.51657333504435,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0.359445373517761,0.599902730993408,0.635351135365324,0,0,0,0,0,0,0,0,0,0,0,0,0.229902104433473,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0.207125772535502,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0,1.79763881730844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5553898757491,1.08781136763742,0,0,0,0,0,0,0.631016438832513,2.73307121007647,4.73931475012158,2.15071918157297,4.01037613348309,1.69845918473299,0.404810701674894,0.876767573733936,1.58115111178609,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0,0,0,0.169978429993855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0.226730383615211,0.221985953374065,0.448569283047378,0.167884616364078,0,0,0,0,0,5.64751842617067,2.76195141904306,6.87474616127276,4.29632955859219,4.7955776383945,8.3093328712867,4.72515750162264,3.60256962579376,4.07828168085784,5.69536342927002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@ENSMUST00000082730 | |short_description=p1@ENSMUST00000082730 | ||
}} | }} |
Latest revision as of 03:17, 6 August 2015
Short description: | p1@ENSMUST00000082730 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000082730_5end |
Coexpression cluster: | MCL_coexpression_mm9:370 |
Association with transcript: | 0bp_to_ENSMUST00000082730_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
somatic stem cell | 2.12e-23 | 91 |
multi fate stem cell | 2.12e-23 | 91 |
embryonic cell | 1.01e-21 | 70 |
stem cell | 3.95e-21 | 97 |
electrically responsive cell | 3.38e-19 | 39 |
electrically active cell | 3.38e-19 | 39 |
neural cell | 5.52e-19 | 43 |
ectodermal cell | 2.32e-18 | 44 |
neurectodermal cell | 2.32e-18 | 44 |
neuron | 7.54e-18 | 33 |
neuronal stem cell | 7.54e-18 | 33 |
neuroblast | 7.54e-18 | 33 |
electrically signaling cell | 7.54e-18 | 33 |
CNS neuron (sensu Vertebrata) | 5.51e-15 | 23 |
neuroblast (sensu Vertebrata) | 5.51e-15 | 23 |
myeloid lineage restricted progenitor cell | 7.25e-09 | 13 |
motile cell | 3.00e-08 | 54 |
megakaryocyte-erythroid progenitor cell | 5.65e-07 | 9 |
connective tissue cell | 7.54e-07 | 46 |
mesenchymal cell | 7.54e-07 | 46 |
myeloid cell | 8.94e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.55e-19 | 73 |
nervous system | 1.03e-18 | 75 |
brain grey matter | 4.43e-17 | 29 |
regional part of telencephalon | 4.43e-17 | 29 |
telencephalon | 4.43e-17 | 29 |
gray matter | 1.88e-16 | 34 |
occipital lobe | 1.66e-14 | 10 |
visual cortex | 1.66e-14 | 10 |
neocortex | 1.66e-14 | 10 |
cerebral cortex | 2.14e-14 | 21 |
cerebral hemisphere | 2.14e-14 | 21 |
pallium | 2.14e-14 | 21 |
regional part of cerebral cortex | 2.74e-14 | 17 |
regional part of nervous system | 2.27e-13 | 54 |
ectoderm-derived structure | 1.81e-12 | 95 |
ectoderm | 1.81e-12 | 95 |
presumptive ectoderm | 1.81e-12 | 95 |
regional part of forebrain | 4.08e-11 | 39 |
forebrain | 4.08e-11 | 39 |
future forebrain | 4.08e-11 | 39 |
regional part of brain | 9.74e-11 | 46 |
anterior neural tube | 1.09e-10 | 40 |
neural tube | 1.39e-10 | 52 |
neural rod | 1.39e-10 | 52 |
future spinal cord | 1.39e-10 | 52 |
neural keel | 1.39e-10 | 52 |
brain | 2.26e-10 | 47 |
future brain | 2.26e-10 | 47 |
neurectoderm | 3.66e-09 | 64 |
neural plate | 3.66e-09 | 64 |
presumptive neural plate | 3.66e-09 | 64 |
pre-chordal neural plate | 1.13e-07 | 49 |
ecto-epithelium | 3.65e-07 | 73 |
connective tissue | 7.54e-07 | 46 |