FFCP PHASE1:Mm9::chrX:160811352..160811356,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=98|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chrX:160811352..160811356,-|id=chrX:160811352..160811356,-|ontology_enrichment_celltype=CL:0000192!1.33e-65!3;CL:0000359!1.33e-65!3;CL:0002539!1.33e-65!3;CL:0000514!1.33e-65!3;CL:0000680!2.03e-33!6;CL:0000183!2.03e-33!6;CL:0000187!2.03e-33!6;CL:0000056!2.03e-33!6;CL:0000222!8.27e-29!7;CL:0000355!1.19e-22!9|ontology_enrichment_celltype_v019_2=CL:0000192,3.28e-58,3;CL:0000359,3.28e-58,3;CL:0002539,3.28e-58,3;CL:0000514,3.28e-58,3;CL:0000680,6.66e-30,6;CL:0000187,6.66e-30,6;CL:0000056,6.66e-30,6;CL:0000222,7.57e-26,7;CL:0000355,1.98e-20,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001135!1.33e-65!3;UBERON:0004237!1.33e-65!3;UBERON:0004695!1.33e-65!3;UBERON:0002111!1.33e-65!3;UBERON:0004178!1.33e-65!3;UBERON:0000947!1.60e-49!4;UBERON:0001637!1.60e-49!4;UBERON:0003509!1.60e-49!4;UBERON:0004573!1.60e-49!4;UBERON:0004571!1.60e-49!4;UBERON:0010191!1.60e-49!4;UBERON:0004572!1.60e-49!4;UBERON:0000055!7.27e-40!5;UBERON:0001981!7.27e-40!5;UBERON:0002049!7.27e-40!5;UBERON:0007500!7.27e-40!5;UBERON:0007798!7.27e-40!5;UBERON:0004537!7.27e-40!5;UBERON:0006965!7.27e-40!5;UBERON:0001134!1.19e-22!9;UBERON:0002036!1.19e-22!9;UBERON:0002385!1.19e-22!9;UBERON:0000486!1.19e-22!9;UBERON:0001015!1.19e-22!9;UBERON:0004290!1.19e-22!9;UBERON:0003082!1.19e-22!9;UBERON:0000383!1.71e-20!10;UBERON:0002329!1.00e-18!11;UBERON:0003077!1.00e-18!11;UBERON:0003059!1.00e-18!11;UBERON:0007282!1.00e-18!11;UBERON:0009618!1.00e-18!11;UBERON:0007285!1.00e-18!11;UBERON:0000914!1.84e-12!17;UBERON:0004535!1.91e-09!23;UBERON:0001009!1.91e-09!23;UBERON:0000992!1.88e-08!3;UBERON:0002204!5.08e-07!32;UBERON:0004872!7.84e-07!33|ontology_enrichment_uberon_v019_2=UBERON:0001135,3.28e-58,3;UBERON:0004237,3.28e-58,3;UBERON:0004695,3.28e-58,3;UBERON:0002111,3.28e-58,3;UBERON:0004178,3.28e-58,3;UBERON:0000947,4.54e-44,4;UBERON:0001637,4.54e-44,4;UBERON:0004573,4.54e-44,4;UBERON:0003509,4.54e-44,4;UBERON:0004571,4.54e-44,4;UBERON:0010191,4.54e-44,4;UBERON:0004572,4.54e-44,4;UBERON:0000055,1.42e-35,5;UBERON:0007500,1.42e-35,5;UBERON:0001981,1.42e-35,5;UBERON:0002049,1.42e-35,5;UBERON:0007798,1.42e-35,5;UBERON:0004537,1.42e-35,5;UBERON:0006965,1.42e-35,5;UBERON:0001134,1.98e-20,9;UBERON:0002036,1.98e-20,9;UBERON:0002385,1.98e-20,9;UBERON:0000486,1.98e-20,9;UBERON:0007503,1.98e-20,9;UBERON:0001015,1.98e-20,9;UBERON:0002329,1.98e-20,9;UBERON:0003082,1.98e-20,9;UBERON:0003059,1.98e-20,9;UBERON:0007282,1.98e-20,9;UBERON:0004290,1.98e-20,9;UBERON:0009618,1.98e-20,9;UBERON:0000383,1.57e-18,10;UBERON:0007524,5.67e-17,11;UBERON:0003077,5.67e-17,11;UBERON:0007285,5.67e-17,11;UBERON:0004535,8.45e-09,23;UBERON:0001009,8.45e-09,23|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.26614272356039,2.43304634926835,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chrX:160811352..160811356,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=98 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chrX:160811352..160811356,- | |||
|description=CAGE_peak_at_chrX:160811352..160811356,- | |||
|id=chrX:160811352..160811356,- | |||
|ontology_enrichment_celltype=CL:0000192!1.33e-65!3;CL:0000359!1.33e-65!3;CL:0002539!1.33e-65!3;CL:0000514!1.33e-65!3;CL:0000680!2.03e-33!6;CL:0000183!2.03e-33!6;CL:0000187!2.03e-33!6;CL:0000056!2.03e-33!6;CL:0000222!8.27e-29!7;CL:0000355!1.19e-22!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,3.28e-58,3;CL:0000359,3.28e-58,3;CL:0002539,3.28e-58,3;CL:0000514,3.28e-58,3;CL:0000680,6.66e-30,6;CL:0000187,6.66e-30,6;CL:0000056,6.66e-30,6;CL:0000222,7.57e-26,7;CL:0000355,1.98e-20,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001135!1.33e-65!3;UBERON:0004237!1.33e-65!3;UBERON:0004695!1.33e-65!3;UBERON:0002111!1.33e-65!3;UBERON:0004178!1.33e-65!3;UBERON:0000947!1.60e-49!4;UBERON:0001637!1.60e-49!4;UBERON:0003509!1.60e-49!4;UBERON:0004573!1.60e-49!4;UBERON:0004571!1.60e-49!4;UBERON:0010191!1.60e-49!4;UBERON:0004572!1.60e-49!4;UBERON:0000055!7.27e-40!5;UBERON:0001981!7.27e-40!5;UBERON:0002049!7.27e-40!5;UBERON:0007500!7.27e-40!5;UBERON:0007798!7.27e-40!5;UBERON:0004537!7.27e-40!5;UBERON:0006965!7.27e-40!5;UBERON:0001134!1.19e-22!9;UBERON:0002036!1.19e-22!9;UBERON:0002385!1.19e-22!9;UBERON:0000486!1.19e-22!9;UBERON:0001015!1.19e-22!9;UBERON:0004290!1.19e-22!9;UBERON:0003082!1.19e-22!9;UBERON:0000383!1.71e-20!10;UBERON:0002329!1.00e-18!11;UBERON:0003077!1.00e-18!11;UBERON:0003059!1.00e-18!11;UBERON:0007282!1.00e-18!11;UBERON:0009618!1.00e-18!11;UBERON:0007285!1.00e-18!11;UBERON:0000914!1.84e-12!17;UBERON:0004535!1.91e-09!23;UBERON:0001009!1.91e-09!23;UBERON:0000992!1.88e-08!3;UBERON:0002204!5.08e-07!32;UBERON:0004872!7.84e-07!33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,3.28e-58,3;UBERON:0004237,3.28e-58,3;UBERON:0004695,3.28e-58,3;UBERON:0002111,3.28e-58,3;UBERON:0004178,3.28e-58,3;UBERON:0000947,4.54e-44,4;UBERON:0001637,4.54e-44,4;UBERON:0004573,4.54e-44,4;UBERON:0003509,4.54e-44,4;UBERON:0004571,4.54e-44,4;UBERON:0010191,4.54e-44,4;UBERON:0004572,4.54e-44,4;UBERON:0000055,1.42e-35,5;UBERON:0007500,1.42e-35,5;UBERON:0001981,1.42e-35,5;UBERON:0002049,1.42e-35,5;UBERON:0007798,1.42e-35,5;UBERON:0004537,1.42e-35,5;UBERON:0006965,1.42e-35,5;UBERON:0001134,1.98e-20,9;UBERON:0002036,1.98e-20,9;UBERON:0002385,1.98e-20,9;UBERON:0000486,1.98e-20,9;UBERON:0007503,1.98e-20,9;UBERON:0001015,1.98e-20,9;UBERON:0002329,1.98e-20,9;UBERON:0003082,1.98e-20,9;UBERON:0003059,1.98e-20,9;UBERON:0007282,1.98e-20,9;UBERON:0004290,1.98e-20,9;UBERON:0009618,1.98e-20,9;UBERON:0000383,1.57e-18,10;UBERON:0007524,5.67e-17,11;UBERON:0003077,5.67e-17,11;UBERON:0007285,5.67e-17,11;UBERON:0004535,8.45e-09,23;UBERON:0001009,8.45e-09,23 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.26614272356039,2.43304634926835,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chrX:160811352..160811356,- | |||
}} |
Latest revision as of 04:10, 6 August 2015
Short description: | p@chrX:160811352..160811356, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chrX:160811352..160811356, - |
Coexpression cluster: | MCL_coexpression_mm9:98 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 3.28e-58 | 3 |
vascular associated smooth muscle cell | 3.28e-58 | 3 |
aortic smooth muscle cell | 3.28e-58 | 3 |
smooth muscle myoblast | 3.28e-58 | 3 |
muscle precursor cell | 6.66e-30 | 6 |
muscle cell | 6.66e-30 | 6 |
myoblast | 6.66e-30 | 6 |
mesodermal cell | 7.57e-26 | 7 |
multi-potent skeletal muscle stem cell | 1.98e-20 | 9 |