FFCP PHASE1:Mm9::chr18:82753905..82753933,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=270 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:82753905..82753933,- | |||
|description=CAGE_peak_at_chr18:82753905..82753933,- | |description=CAGE_peak_at_chr18:82753905..82753933,- | ||
|id=chr18:82753905..82753933,- | |id=chr18:82753905..82753933,- | ||
|ontology_enrichment_celltype=CL:0000117!1.08e-08!23;CL:0000337!1.08e-08!23;CL:0002614!2.04e-08!3;CL:0000221!2.06e-08!44;CL:0000133!2.06e-08!44;CL:0002610!5.32e-08!3;CL:0002319!1.82e-07!43 | |ontology_enrichment_celltype=CL:0000117!1.08e-08!23;CL:0000337!1.08e-08!23;CL:0002614!2.04e-08!3;CL:0000221!2.06e-08!44;CL:0000133!2.06e-08!44;CL:0002610!5.32e-08!3;CL:0002319!1.82e-07!43 | ||
|ontology_enrichment_celltype_v019_2=CL:0002614,2.38e-13,3;CL:0002610,1.24e-12,3;CL:0000117,1.84e-10,23;CL:0000337,1.84e-10,23;CL:0002611,1.82e-09,2;CL:0002319,9.08e-08,43;CL:0000221,1.49e-07,44;CL:0000133,1.49e-07,44;CL:0000540,6.18e-07,33;CL:0000047,6.18e-07,33;CL:0000031,6.18e-07,33;CL:0000404,6.18e-07,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.40e-24!75;UBERON:0001016!2.40e-24!75;UBERON:0001049!6.48e-22!52;UBERON:0005068!6.48e-22!52;UBERON:0006241!6.48e-22!52;UBERON:0007135!6.48e-22!52;UBERON:0001017!8.83e-22!73;UBERON:0005743!8.83e-22!73;UBERON:0004121!3.43e-21!102;UBERON:0000924!3.43e-21!102;UBERON:0006601!3.43e-21!102;UBERON:0000033!7.23e-20!63;UBERON:0002616!1.71e-19!49;UBERON:0000955!5.47e-19!50;UBERON:0006238!5.47e-19!50;UBERON:0002346!1.51e-18!71;UBERON:0003075!1.51e-18!71;UBERON:0007284!1.51e-18!71;UBERON:0002020!3.04e-15!34;UBERON:0002298!8.45e-15!6;UBERON:0003076!1.29e-14!12;UBERON:0003057!1.29e-14!12;UBERON:0007811!8.38e-13!86;UBERON:0003056!1.05e-11!49;UBERON:0000153!3.65e-11!94;UBERON:0003080!9.95e-11!40;UBERON:0002950!2.13e-10!4;UBERON:0001891!2.13e-10!4;UBERON:0009616!2.13e-10!4;UBERON:0002791!3.67e-10!29;UBERON:0003528!3.67e-10!29;UBERON:0001893!3.67e-10!29;UBERON:0002240!7.94e-10!6;UBERON:0005174!7.94e-10!6;UBERON:0001137!7.94e-10!6;UBERON:0002021!1.36e-09!10;UBERON:0000411!1.36e-09!10;UBERON:0001950!1.36e-09!10;UBERON:0002780!1.47e-09!39;UBERON:0001890!1.47e-09!39;UBERON:0006240!1.47e-09!39;UBERON:0002038!2.04e-08!3;UBERON:0002308!2.04e-08!3;UBERON:0009663!2.04e-08!3;UBERON:0009661!2.04e-08!3;UBERON:0006331!2.04e-08!3;UBERON:0000125!2.04e-08!3;UBERON:0004684!5.32e-08!3;UBERON:0002275!5.32e-08!3;UBERON:0001948!1.01e-07!5;UBERON:0002315!1.01e-07!5;UBERON:0002619!8.92e-07!17 | |ontology_enrichment_uberon=UBERON:0000073!2.40e-24!75;UBERON:0001016!2.40e-24!75;UBERON:0001049!6.48e-22!52;UBERON:0005068!6.48e-22!52;UBERON:0006241!6.48e-22!52;UBERON:0007135!6.48e-22!52;UBERON:0001017!8.83e-22!73;UBERON:0005743!8.83e-22!73;UBERON:0004121!3.43e-21!102;UBERON:0000924!3.43e-21!102;UBERON:0006601!3.43e-21!102;UBERON:0000033!7.23e-20!63;UBERON:0002616!1.71e-19!49;UBERON:0000955!5.47e-19!50;UBERON:0006238!5.47e-19!50;UBERON:0002346!1.51e-18!71;UBERON:0003075!1.51e-18!71;UBERON:0007284!1.51e-18!71;UBERON:0002020!3.04e-15!34;UBERON:0002298!8.45e-15!6;UBERON:0003076!1.29e-14!12;UBERON:0003057!1.29e-14!12;UBERON:0007811!8.38e-13!86;UBERON:0003056!1.05e-11!49;UBERON:0000153!3.65e-11!94;UBERON:0003080!9.95e-11!40;UBERON:0002950!2.13e-10!4;UBERON:0001891!2.13e-10!4;UBERON:0009616!2.13e-10!4;UBERON:0002791!3.67e-10!29;UBERON:0003528!3.67e-10!29;UBERON:0001893!3.67e-10!29;UBERON:0002240!7.94e-10!6;UBERON:0005174!7.94e-10!6;UBERON:0001137!7.94e-10!6;UBERON:0002021!1.36e-09!10;UBERON:0000411!1.36e-09!10;UBERON:0001950!1.36e-09!10;UBERON:0002780!1.47e-09!39;UBERON:0001890!1.47e-09!39;UBERON:0006240!1.47e-09!39;UBERON:0002038!2.04e-08!3;UBERON:0002308!2.04e-08!3;UBERON:0009663!2.04e-08!3;UBERON:0009661!2.04e-08!3;UBERON:0006331!2.04e-08!3;UBERON:0000125!2.04e-08!3;UBERON:0004684!5.32e-08!3;UBERON:0002275!5.32e-08!3;UBERON:0001948!1.01e-07!5;UBERON:0002315!1.01e-07!5;UBERON:0002619!8.92e-07!17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.15e-23,54;UBERON:0001016,5.41e-22,75;UBERON:0001017,1.56e-20,73;UBERON:0001049,5.38e-19,52;UBERON:0005068,5.38e-19,52;UBERON:0006241,5.38e-19,52;UBERON:0007135,5.38e-19,52;UBERON:0002950,9.48e-17,4;UBERON:0001891,9.48e-17,4;UBERON:0009616,9.48e-17,4;UBERON:0010286,9.48e-17,4;UBERON:0004121,1.24e-16,95;UBERON:0000924,1.24e-16,95;UBERON:0006601,1.24e-16,95;UBERON:0003076,1.21e-15,12;UBERON:0003057,1.21e-15,12;UBERON:0002346,7.28e-15,64;UBERON:0003075,7.28e-15,64;UBERON:0007284,7.28e-15,64;UBERON:0002616,4.13e-14,46;UBERON:0000955,9.32e-14,47;UBERON:0006238,9.32e-14,47;UBERON:0002038,2.38e-13,3;UBERON:0009663,2.38e-13,3;UBERON:0009661,2.38e-13,3;UBERON:0000125,2.38e-13,3;UBERON:0002308,2.38e-13,3;UBERON:0010371,1.18e-12,73;UBERON:0004684,1.24e-12,3;UBERON:0002275,1.24e-12,3;UBERON:0004733,1.51e-10,6;UBERON:0004732,1.51e-10,6;UBERON:0002028,1.51e-10,6;UBERON:0007277,1.51e-10,6;UBERON:0002256,1.82e-09,2;UBERON:0010314,2.12e-09,92;UBERON:0001896,3.18e-09,2;UBERON:0002298,3.18e-09,2;UBERON:0005290,3.18e-09,2;UBERON:0010096,3.18e-09,2;UBERON:0002020,3.68e-08,34;UBERON:0003080,3.71e-08,40;UBERON:0000025,5.54e-07,114;UBERON:0002240,7.66e-07,6;UBERON:0005174,7.66e-07,6;UBERON:0001137,7.66e-07,6;UBERON:0002780,8.60e-07,39;UBERON:0001890,8.60e-07,39;UBERON:0006240,8.60e-07,39 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,1.92109152660777,0,0,0,9.71213346972932,6.62605622854841,0,0,0,4.40463523997555,3.57524546638526,3.99376986466233,0,0,0,12.5632349550621,9.00420176050688,5.50073691996516,0.589257170947335,0.854230084794618,0,1.06016670666458,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0.845060518660083,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17112318804619,1.25668024088073,0,0,0,0,1.9472783122627,0.457500602818626,0,1.21677024134594,1.27857728665165,2.90903262383384,2.92034273521964,0,0,0,0,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.0137647496948,8.08760637486202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.7481843623258,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0,2.29158205375759,0.343706364687375,2.74033007908257,0,0.675022500231806,0.45032120322422,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.249810577937946,0,0,0.191288332068843,0.441182838239031,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,1.92109152660777,0,0,0,9.71213346972932,6.62605622854841,0,0,0,4.40463523997555,3.57524546638526,3.99376986466233,0,0,0,12.5632349550621,9.00420176050688,5.50073691996516,0.589257170947335,0.854230084794618,0,1.06016670666458,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0.845060518660083,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17112318804619,1.25668024088073,0,0,0,0,1.9472783122627,0.457500602818626,0,1.21677024134594,1.27857728665165,2.90903262383384,2.92034273521964,0,0,0,0,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.0137647496948,8.08760637486202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.7481843623258,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0,2.29158205375759,0.343706364687375,2.74033007908257,0,0.675022500231806,0.45032120322422,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.249810577937946,0,0,0.191288332068843,0.441182838239031,0 | ||
|short_description=p@chr18:82753905..82753933,- | |short_description=p@chr18:82753905..82753933,- | ||
}} | }} |
Latest revision as of 04:49, 6 August 2015
Short description: | p@chr18:82753905..82753933, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:82753905..82753933, - |
Coexpression cluster: | MCL_coexpression_mm9:270 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the substantia nigra | 2.38e-13 | 3 |
raphe nuclei neuron | 1.24e-12 | 3 |
CNS neuron (sensu Vertebrata) | 1.84e-10 | 23 |
neuroblast (sensu Vertebrata) | 1.84e-10 | 23 |
neuron of the dorsal spinal cord | 1.82e-09 | 2 |
neural cell | 9.08e-08 | 43 |
ectodermal cell | 1.49e-07 | 44 |
neurectodermal cell | 1.49e-07 | 44 |
neuron | 6.18e-07 | 33 |
neuronal stem cell | 6.18e-07 | 33 |
neuroblast | 6.18e-07 | 33 |
electrically signaling cell | 6.18e-07 | 33 |