FFCP PHASE1:Mm9::chr8:13600624..13600643,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:13600624..13600643,+
|short_description=p@chr8:13600624..13600643,+
|description=CAGE_peak_at_chr8:13600624..13600643,+
|association_with_transcript=NA
|E...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=6 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr8:13600624..13600643,+ | |||
|description=CAGE_peak_at_chr8:13600624..13600643,+ | |||
|id=chr8:13600624..13600643,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,4.40e-10,25;CL:0000838,8.68e-10,12;CL:0000542,4.68e-09,13;CL:0000051,4.68e-09,13;CL:0000945,1.24e-08,1;CL:0000236,1.24e-08,1;CL:0000826,1.24e-08,1;CL:0000815,2.06e-08,1;CL:0000792,2.06e-08,1;CL:0000625,2.89e-08,1;CL:0000355,3.88e-08,9;CL:0000988,8.00e-08,32;CL:0002032,8.00e-08,32;CL:0000037,8.00e-08,32;CL:0000837,8.00e-08,32;CL:0000791,1.22e-07,9;CL:0000789,1.22e-07,9;CL:0002420,1.22e-07,9;CL:0002419,1.22e-07,9;CL:0000790,1.22e-07,9;CL:0000738,5.54e-07,17;CL:0002087,5.54e-07,17 | |||
|ontology_enrichment_disease=DOID:0060100!3.36e-09!3;DOID:4045!3.36e-09!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,3.35e-23,3;DOID:4045,3.35e-23,3;DOID:0050686,6.27e-12,6 | |||
|ontology_enrichment_uberon=UBERON:0002193!4.15e-08!48;UBERON:0004177!1.16e-07!29;UBERON:0002390!1.54e-07!45;UBERON:0003061!1.54e-07!45;UBERON:0000065!6.31e-07!41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,3.88e-08,9;UBERON:0002036,3.88e-08,9;UBERON:0002385,3.88e-08,9;UBERON:0000486,3.88e-08,9;UBERON:0007503,3.88e-08,9;UBERON:0001015,3.88e-08,9;UBERON:0002329,3.88e-08,9;UBERON:0003082,3.88e-08,9;UBERON:0003059,3.88e-08,9;UBERON:0007282,3.88e-08,9;UBERON:0004290,3.88e-08,9;UBERON:0009618,3.88e-08,9;UBERON:0000383,2.25e-07,10;UBERON:0007524,9.52e-07,11;UBERON:0003077,9.52e-07,11;UBERON:0007285,9.52e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,1.16210991097419,0,0,0,0,1.02720437958723,0.611942816932982,0,0,0,1.41957974411207,0.959801035240171,1.27316895539409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.78916424547506,7.0320181007142,6.80580867165938,35.8821207698919,6.83045484958446,7.76816564849846,0,0,0,0,0,0,0,0,0,1.51004345451963,0,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.517875767294343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0.315270288212382,0,0,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0.170870880797853,0,0.555583582109135,0,0,0.228778173206523,0.339956859987711,0.279902904647316,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0.147689527174577,0,0.15241361331,0.100826185136841,0,0.192423683280659,0.233753804363138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,1.16210991097419,0,0,0,0,1.02720437958723,0.611942816932982,0,0,0,1.41957974411207,0.959801035240171,1.27316895539409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.78916424547506,7.0320181007142,6.80580867165938,35.8821207698919,6.83045484958446,7.76816564849846,0,0,0,0,0,0,0,0,0,1.51004345451963,0,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.517875767294343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0.315270288212382,0,0,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0.170870880797853,0,0.555583582109135,0,0,0.228778173206523,0.339956859987711,0.279902904647316,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0.147689527174577,0,0.15241361331,0.100826185136841,0,0.192423683280659,0.233753804363138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr8:13600624..13600643,+ | |||
}} | }} |
Latest revision as of 05:04, 6 August 2015
Short description: | p@chr8:13600624..13600643, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:13600624..13600643, + |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 4.40e-10 | 25 |
lymphoid lineage restricted progenitor cell | 8.68e-10 | 12 |
lymphocyte | 4.68e-09 | 13 |
common lymphoid progenitor | 4.68e-09 | 13 |
lymphocyte of B lineage | 1.24e-08 | 1 |
B cell | 1.24e-08 | 1 |
pro-B cell | 1.24e-08 | 1 |
regulatory T cell | 2.06e-08 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 2.06e-08 | 1 |
CD8-positive, alpha-beta T cell | 2.89e-08 | 1 |
multi-potent skeletal muscle stem cell | 3.88e-08 | 9 |
hematopoietic cell | 8.00e-08 | 32 |
hematopoietic oligopotent progenitor cell | 8.00e-08 | 32 |
hematopoietic stem cell | 8.00e-08 | 32 |
hematopoietic multipotent progenitor cell | 8.00e-08 | 32 |
mature alpha-beta T cell | 1.22e-07 | 9 |
alpha-beta T cell | 1.22e-07 | 9 |
immature T cell | 1.22e-07 | 9 |
mature T cell | 1.22e-07 | 9 |
immature alpha-beta T cell | 1.22e-07 | 9 |
leukocyte | 5.54e-07 | 17 |
nongranular leukocyte | 5.54e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 3.88e-08 | 9 |
striated muscle tissue | 3.88e-08 | 9 |
muscle tissue | 3.88e-08 | 9 |
multilaminar epithelium | 3.88e-08 | 9 |
epithelial vesicle | 3.88e-08 | 9 |
musculature | 3.88e-08 | 9 |
somite | 3.88e-08 | 9 |
myotome | 3.88e-08 | 9 |
presomitic mesoderm | 3.88e-08 | 9 |
presumptive segmental plate | 3.88e-08 | 9 |
dermomyotome | 3.88e-08 | 9 |
trunk paraxial mesoderm | 3.88e-08 | 9 |
musculature of body | 2.25e-07 | 10 |
dense mesenchyme tissue | 9.52e-07 | 11 |
paraxial mesoderm | 9.52e-07 | 11 |
presumptive paraxial mesoderm | 9.52e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 3.35e-23 | 3 |
muscle cancer | 3.35e-23 | 3 |
organ system cancer | 6.27e-12 | 6 |