FFCP PHASE1:Mm9::chr13:60277410..60277414,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=188|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:60277410..60277414,-|id=chr13:60277410..60277414,-|ontology_enrichment_celltype=CL:0000055!4.13e-08!50;CL:0002453!3.90e-07!8|ontology_enrichment_celltype_v019_2=CL:0002453,1.64e-18,8;CL:0000128,2.62e-17,6;CL:0000126,2.62e-17,6;CL:0000127,2.62e-17,6;CL:0000333,1.00e-14,10;CL:0000095,1.00e-14,10;CL:0000243,1.00e-14,10;CL:0000123,1.00e-14,10;CL:0000125,1.00e-14,10;CL:0000030,1.00e-14,10;CL:0000339,1.00e-14,10;CL:0000680,2.60e-12,6;CL:0000187,2.60e-12,6;CL:0000056,2.60e-12,6;CL:0000222,1.43e-10,7;CL:0002603,3.24e-09,2;CL:0000355,3.06e-08,9;CL:0002321,3.66e-08,70;CL:0000192,5.22e-07,3;CL:0000359,5.22e-07,3;CL:0002539,5.22e-07,3;CL:0000514,5.22e-07,3;CL:0002494,6.81e-07,3;CL:0000737,6.81e-07,3;CL:0000746,6.81e-07,3;CL:0000513,6.81e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0007524,6.50e-10,11;UBERON:0003077,6.50e-10,11;UBERON:0007285,6.50e-10,11;UBERON:0001134,3.06e-08,9;UBERON:0002036,3.06e-08,9;UBERON:0002385,3.06e-08,9;UBERON:0000486,3.06e-08,9;UBERON:0007503,3.06e-08,9;UBERON:0001015,3.06e-08,9;UBERON:0002329,3.06e-08,9;UBERON:0003082,3.06e-08,9;UBERON:0003059,3.06e-08,9;UBERON:0007282,3.06e-08,9;UBERON:0004290,3.06e-08,9;UBERON:0009618,3.06e-08,9;UBERON:0000383,2.02e-07,10;UBERON:0001135,5.22e-07,3;UBERON:0004237,5.22e-07,3;UBERON:0004695,5.22e-07,3;UBERON:0002111,5.22e-07,3;UBERON:0004178,5.22e-07,3|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.52511090331616,3.54819259268301,0.367093504323363,2.34717403304412,1.09012578190223,0.659058548203415,1.1665793944457,1.25987779462826,2.87505128729943,0,0,0,1.54355661621568,0.85960031981627,4.64104883049698,0.404632921719196,0,0,0,0,0,0,0,0.898800331555214,1.92109152660777,0.518448061542388,1.89008313664367,0.630974884054146,0,0,0,0.383381884072945,0.919218786610021,0,0,0.46081959976873,0.131886287730194,0,0,0.279182999001381,0.56276261003168,0.15279824777681,0.883885756421003,0.142371680799103,0,0,0,0.289864488701678,0,0,0,0.649776417447669,0.448026887097336,0,3.2381761289831,4.1565760736459,3.5333957451034,1.12674735821344,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0.125666591329675,0,0.578397427679647,0.884610551949874,0,0,0.484875253135222,0,0,0,0,0,0,0,0,0,0.125654352112864,0,0,0,0,0.916554274652847,0.124406970610093,0,0,0.260240885925407,0.459804208866946,0.180062129805349,0.452114453507145,0.204109497453984,0.384341160854549,0.187403449119458,0,0.215567992932842,0.756424320671277,1.40760899331159,1.09597866213787,1.11218899690239,0.696504333044333,0.411564272815887,0,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0.23674473558521,0,0.308534225774757,0,0,0.116765342367169,0.16455984991348,0.492502392237286,0,0.584799949701329,0,0,0,0.102904612379284,0,0,0,0,0.38660238396628,0,0,0.190225626112559,0,0,0,0.198956472041151,0,0.898819408654221,0,0,0.569003702859245,0.228497025219458,0,0.407302655690628,0,0.0701358198903186,0.189709611372772,0.147610147979602,0,0.123397163921801,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0.37898282354097,0.162964976442026,0,0,0.335012514883631,0,0,0,0.221464689648775,0.159454768657487,0,0.172684981865896,0,0,0,0.491764273019036,0.275936746304732,0,0,1.3114795630134,0.504941854408746,0,0.390438744296638,0.215423397732799,0.716906393857656,0.445597348164788,0,0.809621403349789,1.16902343164525,0,0,0.141940085208269,0.890328018336276,0.325773918707152,0,0,1.21390318077491,0,0,0,0,0.258428293168221,0.363533729477506,0,0,0,0,0.680879211507576,0.18006109403131,0,0.214337035031592,0,0.178368817602071,0,0,0.23467170806371,0,0.220528398054962,0.16488625294148,0.484393280087717,0.180938774784468,0.119372344003136,0.164140899745061,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0.316335993581135,0.406638934253697,0.216010681643603,0.209088296014469,0,0,0.0826534557253359,0,0.129614973291793,0,0,0.149516546043979,0.330916980914195,0.194451188344048,0.258319646955462,0.337912250981556,0,0,0.104859344425711,0,0,0.316011120628178,0.202725215290164,0.102710957164827,0.129920822977795,0,0,0.240390899039938,0,0.100966449948148,0,0,0.0974578807397524,0,0.116876902181569,0.680191150845634,0,0,0,0.965947970160952,0.563047426353546,0.183151624267265,0,0,0.564751842617067,0,0.572895513439397,0.171853182343688,0.685082519770642,0.755393897389701,0,0.45032120322422,0,0,0.207574695168353,0.798049746802062,0.341467211508268,0,0.209613162627982,0,0,0.206035057238894,0.320919209591815,0,0.25347929989024,0,0.0936415074698824,0.192075457214608,0.0574354689556133,0,0.115884325944855,0.38581844092741,0.412085900803307,0.441596760403192,0,0,0.715308569841963,0.145346416632329,0.188218760830661,0.0846146078916765,0,0,0.543216455383447,0.561142271657738,0,0.197008964751127,0,0.309873682371932,0.192906610981141,0.249810577937946,0.467863216890817,0.214871054048298,0.765153328275374,0.220591419119515,0|short_description=p@chr13:60277410..60277414,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=188 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr13:60277410..60277414,- | |||
|description=CAGE_peak_at_chr13:60277410..60277414,- | |||
|id=chr13:60277410..60277414,- | |||
|ontology_enrichment_celltype=CL:0000055!4.13e-08!50;CL:0002453!3.90e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,1.64e-18,8;CL:0000128,2.62e-17,6;CL:0000126,2.62e-17,6;CL:0000127,2.62e-17,6;CL:0000333,1.00e-14,10;CL:0000095,1.00e-14,10;CL:0000243,1.00e-14,10;CL:0000123,1.00e-14,10;CL:0000125,1.00e-14,10;CL:0000030,1.00e-14,10;CL:0000339,1.00e-14,10;CL:0000680,2.60e-12,6;CL:0000187,2.60e-12,6;CL:0000056,2.60e-12,6;CL:0000222,1.43e-10,7;CL:0002603,3.24e-09,2;CL:0000355,3.06e-08,9;CL:0002321,3.66e-08,70;CL:0000192,5.22e-07,3;CL:0000359,5.22e-07,3;CL:0002539,5.22e-07,3;CL:0000514,5.22e-07,3;CL:0002494,6.81e-07,3;CL:0000737,6.81e-07,3;CL:0000746,6.81e-07,3;CL:0000513,6.81e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,6.50e-10,11;UBERON:0003077,6.50e-10,11;UBERON:0007285,6.50e-10,11;UBERON:0001134,3.06e-08,9;UBERON:0002036,3.06e-08,9;UBERON:0002385,3.06e-08,9;UBERON:0000486,3.06e-08,9;UBERON:0007503,3.06e-08,9;UBERON:0001015,3.06e-08,9;UBERON:0002329,3.06e-08,9;UBERON:0003082,3.06e-08,9;UBERON:0003059,3.06e-08,9;UBERON:0007282,3.06e-08,9;UBERON:0004290,3.06e-08,9;UBERON:0009618,3.06e-08,9;UBERON:0000383,2.02e-07,10;UBERON:0001135,5.22e-07,3;UBERON:0004237,5.22e-07,3;UBERON:0004695,5.22e-07,3;UBERON:0002111,5.22e-07,3;UBERON:0004178,5.22e-07,3 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.52511090331616,3.54819259268301,0.367093504323363,2.34717403304412,1.09012578190223,0.659058548203415,1.1665793944457,1.25987779462826,2.87505128729943,0,0,0,1.54355661621568,0.85960031981627,4.64104883049698,0.404632921719196,0,0,0,0,0,0,0,0.898800331555214,1.92109152660777,0.518448061542388,1.89008313664367,0.630974884054146,0,0,0,0.383381884072945,0.919218786610021,0,0,0.46081959976873,0.131886287730194,0,0,0.279182999001381,0.56276261003168,0.15279824777681,0.883885756421003,0.142371680799103,0,0,0,0.289864488701678,0,0,0,0.649776417447669,0.448026887097336,0,3.2381761289831,4.1565760736459,3.5333957451034,1.12674735821344,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0.125666591329675,0,0.578397427679647,0.884610551949874,0,0,0.484875253135222,0,0,0,0,0,0,0,0,0,0.125654352112864,0,0,0,0,0.916554274652847,0.124406970610093,0,0,0.260240885925407,0.459804208866946,0.180062129805349,0.452114453507145,0.204109497453984,0.384341160854549,0.187403449119458,0,0.215567992932842,0.756424320671277,1.40760899331159,1.09597866213787,1.11218899690239,0.696504333044333,0.411564272815887,0,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0.23674473558521,0,0.308534225774757,0,0,0.116765342367169,0.16455984991348,0.492502392237286,0,0.584799949701329,0,0,0,0.102904612379284,0,0,0,0,0.38660238396628,0,0,0.190225626112559,0,0,0,0.198956472041151,0,0.898819408654221,0,0,0.569003702859245,0.228497025219458,0,0.407302655690628,0,0.0701358198903186,0.189709611372772,0.147610147979602,0,0.123397163921801,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0.37898282354097,0.162964976442026,0,0,0.335012514883631,0,0,0,0.221464689648775,0.159454768657487,0,0.172684981865896,0,0,0,0.491764273019036,0.275936746304732,0,0,1.3114795630134,0.504941854408746,0,0.390438744296638,0.215423397732799,0.716906393857656,0.445597348164788,0,0.809621403349789,1.16902343164525,0,0,0.141940085208269,0.890328018336276,0.325773918707152,0,0,1.21390318077491,0,0,0,0,0.258428293168221,0.363533729477506,0,0,0,0,0.680879211507576,0.18006109403131,0,0.214337035031592,0,0.178368817602071,0,0,0.23467170806371,0,0.220528398054962,0.16488625294148,0.484393280087717,0.180938774784468,0.119372344003136,0.164140899745061,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0.316335993581135,0.406638934253697,0.216010681643603,0.209088296014469,0,0,0.0826534557253359,0,0.129614973291793,0,0,0.149516546043979,0.330916980914195,0.194451188344048,0.258319646955462,0.337912250981556,0,0,0.104859344425711,0,0,0.316011120628178,0.202725215290164,0.102710957164827,0.129920822977795,0,0,0.240390899039938,0,0.100966449948148,0,0,0.0974578807397524,0,0.116876902181569,0.680191150845634,0,0,0,0.965947970160952,0.563047426353546,0.183151624267265,0,0,0.564751842617067,0,0.572895513439397,0.171853182343688,0.685082519770642,0.755393897389701,0,0.45032120322422,0,0,0.207574695168353,0.798049746802062,0.341467211508268,0,0.209613162627982,0,0,0.206035057238894,0.320919209591815,0,0.25347929989024,0,0.0936415074698824,0.192075457214608,0.0574354689556133,0,0.115884325944855,0.38581844092741,0.412085900803307,0.441596760403192,0,0,0.715308569841963,0.145346416632329,0.188218760830661,0.0846146078916765,0,0,0.543216455383447,0.561142271657738,0,0.197008964751127,0,0.309873682371932,0.192906610981141,0.249810577937946,0.467863216890817,0.214871054048298,0.765153328275374,0.220591419119515,0 | |||
|short_description=p@chr13:60277410..60277414,- | |||
}} |
Latest revision as of 05:34, 6 August 2015
Short description: | p@chr13:60277410..60277414, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:60277410..60277414, - |
Coexpression cluster: | MCL_coexpression_mm9:188 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 1.64e-18 | 8 |
oligodendrocyte | 2.62e-17 | 6 |
macroglial cell | 2.62e-17 | 6 |
astrocyte | 2.62e-17 | 6 |
migratory neural crest cell | 1.00e-14 | 10 |
neuron associated cell | 1.00e-14 | 10 |
glial cell (sensu Vertebrata) | 1.00e-14 | 10 |
neuron associated cell (sensu Vertebrata) | 1.00e-14 | 10 |
glial cell | 1.00e-14 | 10 |
glioblast | 1.00e-14 | 10 |
glioblast (sensu Vertebrata) | 1.00e-14 | 10 |
muscle precursor cell | 2.60e-12 | 6 |
muscle cell | 2.60e-12 | 6 |
myoblast | 2.60e-12 | 6 |
mesodermal cell | 1.43e-10 | 7 |
astrocyte of the cerebellum | 3.24e-09 | 2 |
multi-potent skeletal muscle stem cell | 3.06e-08 | 9 |
embryonic cell | 3.66e-08 | 70 |
smooth muscle cell | 5.22e-07 | 3 |
vascular associated smooth muscle cell | 5.22e-07 | 3 |
aortic smooth muscle cell | 5.22e-07 | 3 |
smooth muscle myoblast | 5.22e-07 | 3 |
cardiocyte | 6.81e-07 | 3 |
striated muscle cell | 6.81e-07 | 3 |
cardiac muscle cell | 6.81e-07 | 3 |
cardiac muscle myoblast | 6.81e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
dense mesenchyme tissue | 6.50e-10 | 11 |
paraxial mesoderm | 6.50e-10 | 11 |
presumptive paraxial mesoderm | 6.50e-10 | 11 |
skeletal muscle tissue | 3.06e-08 | 9 |
striated muscle tissue | 3.06e-08 | 9 |
muscle tissue | 3.06e-08 | 9 |
multilaminar epithelium | 3.06e-08 | 9 |
epithelial vesicle | 3.06e-08 | 9 |
musculature | 3.06e-08 | 9 |
somite | 3.06e-08 | 9 |
myotome | 3.06e-08 | 9 |
presomitic mesoderm | 3.06e-08 | 9 |
presumptive segmental plate | 3.06e-08 | 9 |
dermomyotome | 3.06e-08 | 9 |
trunk paraxial mesoderm | 3.06e-08 | 9 |
musculature of body | 2.02e-07 | 10 |
smooth muscle tissue | 5.22e-07 | 3 |
blood vessel smooth muscle | 5.22e-07 | 3 |
arterial system smooth muscle | 5.22e-07 | 3 |
artery smooth muscle tissue | 5.22e-07 | 3 |
aorta smooth muscle tissue | 5.22e-07 | 3 |