FFCP PHASE1:Mm9::chr6:86354185..86354192,+: Difference between revisions
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{{FFCP|EntrezGene=21841|HGNC=|UniProt=P52912,D3Z4H6,Q80ZW7,Q8CII5,Q564E7|association_with_transcript=-20bp_to_ENSMUST00000095753,ENSMUST00000095754,NM_001164078,NM_001164079,NM_011585,uc009crp.2,uc009crq.2,uc009crr.2,uc012eok.1_5end|description=CAGE_peak_4_at_Tia1_5end|id=chr6:86354185..86354192,+|ontology_enrichment_celltype=CL:0000540!3.79e-11!33;CL:0000047!3.79e-11!33;CL:0000031!3.79e-11!33;CL:0000404!3.79e-11!33;CL:0000117!1.94e-10!23;CL:0000337!1.94e-10!23;CL:0002319!2.21e-10!43;CL:0000221!3.14e-10!44;CL:0000133!3.14e-10!44;CL:0000393!3.48e-10!39;CL:0000211!3.48e-10!39;CL:0000055!3.65e-09!50|ontology_enrichment_celltype_v019_2=CL:0000117,6.76e-16,23;CL:0000337,6.76e-16,23;CL:0000540,2.40e-13,33;CL:0000047,2.40e-13,33;CL:0000031,2.40e-13,33;CL:0000404,2.40e-13,33;CL:0002609,2.77e-11,6;CL:0000393,1.23e-10,39;CL:0000211,1.23e-10,39;CL:0002319,1.52e-10,43;CL:0000221,3.33e-10,44;CL:0000133,3.33e-10,44;CL:0000120,2.23e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!4.21e-23!75;UBERON:0001016!4.21e-23!75;UBERON:0001017!8.61e-23!73;UBERON:0005743!8.61e-23!73;UBERON:0004121!2.71e-20!102;UBERON:0000924!2.71e-20!102;UBERON:0006601!2.71e-20!102;UBERON:0001049!5.48e-20!52;UBERON:0005068!5.48e-20!52;UBERON:0006241!5.48e-20!52;UBERON:0007135!5.48e-20!52;UBERON:0002346!2.88e-19!71;UBERON:0003075!2.88e-19!71;UBERON:0007284!2.88e-19!71;UBERON:0000955!5.85e-18!50;UBERON:0006238!5.85e-18!50;UBERON:0002616!2.83e-17!49;UBERON:0000033!1.24e-16!63;UBERON:0003080!2.71e-16!40;UBERON:0002780!9.69e-16!39;UBERON:0001890!9.69e-16!39;UBERON:0006240!9.69e-16!39;UBERON:0002020!1.53e-15!34;UBERON:0003056!2.17e-15!49;UBERON:0002791!1.87e-13!29;UBERON:0003528!1.87e-13!29;UBERON:0001893!1.87e-13!29;UBERON:0007811!2.72e-10!86;UBERON:0000956!3.51e-10!21;UBERON:0001869!3.51e-10!21;UBERON:0000203!3.51e-10!21;UBERON:0000153!2.79e-09!94;UBERON:0002619!6.19e-08!17|ontology_enrichment_uberon_v019_2=UBERON:0003080,6.59e-35,40;UBERON:0002780,2.20e-33,39;UBERON:0001890,2.20e-33,39;UBERON:0006240,2.20e-33,39;UBERON:0001017,2.65e-31,73;UBERON:0000955,4.34e-31,47;UBERON:0006238,4.34e-31,47;UBERON:0001016,3.18e-30,75;UBERON:0002616,2.30e-29,46;UBERON:0001049,4.86e-29,52;UBERON:0005068,4.86e-29,52;UBERON:0006241,4.86e-29,52;UBERON:0007135,4.86e-29,52;UBERON:0003528,1.57e-28,29;UBERON:0002791,1.57e-28,29;UBERON:0001893,1.57e-28,29;UBERON:0002020,4.46e-28,34;UBERON:0000073,1.14e-27,54;UBERON:0003056,4.20e-27,49;UBERON:0000956,6.30e-24,21;UBERON:0001869,6.30e-24,21;UBERON:0000203,6.30e-24,21;UBERON:0002346,4.15e-22,64;UBERON:0003075,4.15e-22,64;UBERON:0007284,4.15e-22,64;UBERON:0004121,6.32e-22,95;UBERON:0000924,6.32e-22,95;UBERON:0006601,6.32e-22,95;UBERON:0010371,6.42e-20,73;UBERON:0002619,1.41e-17,17;UBERON:0010314,3.74e-14,92;UBERON:0002021,2.79e-12,10;UBERON:0000411,2.79e-12,10;UBERON:0001950,2.79e-12,10;UBERON:0000025,4.86e-09,114;UBERON:0004111,9.27e-09,122;UBERON:0001954,8.15e-07,7;UBERON:0003022,8.15e-07,7;UBERON:0002421,8.15e-07,7;UBERON:0000349,8.15e-07,7;UBERON:0002600,8.15e-07,7|phase1_expression=1.28119077683835,0,0,0,0,0.33575854382378,0,0.129123323441576,0,0,0,0.159544317990673,0,0.262261207256992,0,0.202475267389826,1.39912375625629,0,0.548457734422955,0.42438965179803,0.510259740906419,0.397163804803541,0.783599367416806,0.159992422793407,0.22940928106717,0,0,0,0,0.252030129759931,0.443461021310609,0.635030673459631,0,0,0,0,0.408338712524738,0,0,0,0,0.683045484958446,0,0.503587271902309,0.811015449756117,0.734187008646726,0.782391344348039,0.218025156380447,0.439372365468944,0.388859798148567,1.25987779462826,0,0.167782606057736,0,0,0,0.286533439938757,0,1.61853168687678,2.64495489636016,2.53532561402472,1.0165335962074,0,0,0,0,0,0.384218305321555,1.34796496001021,1.62007125998029,1.05162480675691,0.856952953211411,1.10434270475807,1.71487118900936,1.0543001812006,4.5960939330501,0,0.766124028511126,0.921639199537461,1.58263545276233,1.18933936683133,1.56274011167028,1.3959149950069,0.56276261003168,0.30559649555362,0.589257170947335,0.996601765593721,1.1183966749518,0.832988126665025,0.302286240427142,0,0,0,0,0,0,0.140444420131752,0.681721290312231,0,1.06001872353102,0.281686839553361,0,0,0,0.649473123033642,0,0,0.11418387971906,0,0.148442139064825,0.346970653532272,0.304465478312141,0.230615497256059,0.452167921657868,0.117588707135705,0.628332956648377,0.494389935468748,0.144599356919912,0.884610551949874,0,0.220841518460394,0.969750506270444,0,0.878342391034642,0.41889341362691,0,0.359445373517761,0.599902730993408,0,1.19832511523858,0.915001205637253,2.26177833803156,1.91206752211504,2.04572365864264,1.24672826735736,1.62241263067758,0.407357455401265,0.124406970610093,0.252722758433675,0.210441855886474,0.390361328888111,0.229902104433473,0.540186389416048,0.30140963567143,0.408218994907967,0.640568601424249,0.374806898238915,0.258703370739016,1.07783996466421,0.567318240503458,0.351902248327898,0.43839146485515,0,0,0,0.398068533636986,0,0,0,0.414251545071004,0.70357817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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:21841 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P52912,uniprot:D3Z4H6,uniprot:Q80ZW7,uniprot:Q8CII5,uniprot:Q564E7 | |||
|association_with_transcript=-20bp_to_ENSMUST00000095753,ENSMUST00000095754,NM_001164078,NM_001164079,NM_011585,uc009crp.2,uc009crq.2,uc009crr.2,uc012eok.1_5end | |||
|cluster_id=chr6:86354185..86354192,+ | |||
|description=CAGE_peak_4_at_Tia1_5end | |||
|id=chr6:86354185..86354192,+ | |||
|ontology_enrichment_celltype=CL:0000540!3.79e-11!33;CL:0000047!3.79e-11!33;CL:0000031!3.79e-11!33;CL:0000404!3.79e-11!33;CL:0000117!1.94e-10!23;CL:0000337!1.94e-10!23;CL:0002319!2.21e-10!43;CL:0000221!3.14e-10!44;CL:0000133!3.14e-10!44;CL:0000393!3.48e-10!39;CL:0000211!3.48e-10!39;CL:0000055!3.65e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.76e-16,23;CL:0000337,6.76e-16,23;CL:0000540,2.40e-13,33;CL:0000047,2.40e-13,33;CL:0000031,2.40e-13,33;CL:0000404,2.40e-13,33;CL:0002609,2.77e-11,6;CL:0000393,1.23e-10,39;CL:0000211,1.23e-10,39;CL:0002319,1.52e-10,43;CL:0000221,3.33e-10,44;CL:0000133,3.33e-10,44;CL:0000120,2.23e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!4.21e-23!75;UBERON:0001016!4.21e-23!75;UBERON:0001017!8.61e-23!73;UBERON:0005743!8.61e-23!73;UBERON:0004121!2.71e-20!102;UBERON:0000924!2.71e-20!102;UBERON:0006601!2.71e-20!102;UBERON:0001049!5.48e-20!52;UBERON:0005068!5.48e-20!52;UBERON:0006241!5.48e-20!52;UBERON:0007135!5.48e-20!52;UBERON:0002346!2.88e-19!71;UBERON:0003075!2.88e-19!71;UBERON:0007284!2.88e-19!71;UBERON:0000955!5.85e-18!50;UBERON:0006238!5.85e-18!50;UBERON:0002616!2.83e-17!49;UBERON:0000033!1.24e-16!63;UBERON:0003080!2.71e-16!40;UBERON:0002780!9.69e-16!39;UBERON:0001890!9.69e-16!39;UBERON:0006240!9.69e-16!39;UBERON:0002020!1.53e-15!34;UBERON:0003056!2.17e-15!49;UBERON:0002791!1.87e-13!29;UBERON:0003528!1.87e-13!29;UBERON:0001893!1.87e-13!29;UBERON:0007811!2.72e-10!86;UBERON:0000956!3.51e-10!21;UBERON:0001869!3.51e-10!21;UBERON:0000203!3.51e-10!21;UBERON:0000153!2.79e-09!94;UBERON:0002619!6.19e-08!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003080,6.59e-35,40;UBERON:0002780,2.20e-33,39;UBERON:0001890,2.20e-33,39;UBERON:0006240,2.20e-33,39;UBERON:0001017,2.65e-31,73;UBERON:0000955,4.34e-31,47;UBERON:0006238,4.34e-31,47;UBERON:0001016,3.18e-30,75;UBERON:0002616,2.30e-29,46;UBERON:0001049,4.86e-29,52;UBERON:0005068,4.86e-29,52;UBERON:0006241,4.86e-29,52;UBERON:0007135,4.86e-29,52;UBERON:0003528,1.57e-28,29;UBERON:0002791,1.57e-28,29;UBERON:0001893,1.57e-28,29;UBERON:0002020,4.46e-28,34;UBERON:0000073,1.14e-27,54;UBERON:0003056,4.20e-27,49;UBERON:0000956,6.30e-24,21;UBERON:0001869,6.30e-24,21;UBERON:0000203,6.30e-24,21;UBERON:0002346,4.15e-22,64;UBERON:0003075,4.15e-22,64;UBERON:0007284,4.15e-22,64;UBERON:0004121,6.32e-22,95;UBERON:0000924,6.32e-22,95;UBERON:0006601,6.32e-22,95;UBERON:0010371,6.42e-20,73;UBERON:0002619,1.41e-17,17;UBERON:0010314,3.74e-14,92;UBERON:0002021,2.79e-12,10;UBERON:0000411,2.79e-12,10;UBERON:0001950,2.79e-12,10;UBERON:0000025,4.86e-09,114;UBERON:0004111,9.27e-09,122;UBERON:0001954,8.15e-07,7;UBERON:0003022,8.15e-07,7;UBERON:0002421,8.15e-07,7;UBERON:0000349,8.15e-07,7;UBERON:0002600,8.15e-07,7 | |||
|phase1_expression=1.28119077683835,0,0,0,0,0.33575854382378,0,0.129123323441576,0,0,0,0.159544317990673,0,0.262261207256992,0,0.202475267389826,1.39912375625629,0,0.548457734422955,0.42438965179803,0.510259740906419,0.397163804803541,0.783599367416806,0.159992422793407,0.22940928106717,0,0,0,0,0.252030129759931,0.443461021310609,0.635030673459631,0,0,0,0,0.408338712524738,0,0,0,0,0.683045484958446,0,0.503587271902309,0.811015449756117,0.734187008646726,0.782391344348039,0.218025156380447,0.439372365468944,0.388859798148567,1.25987779462826,0,0.167782606057736,0,0,0,0.286533439938757,0,1.61853168687678,2.64495489636016,2.53532561402472,1.0165335962074,0,0,0,0,0,0.384218305321555,1.34796496001021,1.62007125998029,1.05162480675691,0.856952953211411,1.10434270475807,1.71487118900936,1.0543001812006,4.5960939330501,0,0.766124028511126,0.921639199537461,1.58263545276233,1.18933936683133,1.56274011167028,1.3959149950069,0.56276261003168,0.30559649555362,0.589257170947335,0.996601765593721,1.1183966749518,0.832988126665025,0.302286240427142,0,0,0,0,0,0,0.140444420131752,0.681721290312231,0,1.06001872353102,0.281686839553361,0,0,0,0.649473123033642,0,0,0.11418387971906,0,0.148442139064825,0.346970653532272,0.304465478312141,0.230615497256059,0.452167921657868,0.117588707135705,0.628332956648377,0.494389935468748,0.144599356919912,0.884610551949874,0,0.220841518460394,0.969750506270444,0,0.878342391034642,0.41889341362691,0,0.359445373517761,0.599902730993408,0,1.19832511523858,0.915001205637253,2.26177833803156,1.91206752211504,2.04572365864264,1.24672826735736,1.62241263067758,0.407357455401265,0.124406970610093,0.252722758433675,0.210441855886474,0.390361328888111,0.229902104433473,0.540186389416048,0.30140963567143,0.408218994907967,0.640568601424249,0.374806898238915,0.258703370739016,1.07783996466421,0.567318240503458,0.351902248327898,0.43839146485515,0,0,0,0.398068533636986,0,0,0,0.414251545071004,0.703578179943289,0.36012412292203,0,0.393528463494808,0.154267112887378,0,0,0.233530684734339,0,0.164167464079095,0.0810688095458557,0,0,0.134206418760372,1.26173969138476,1.23485534855141,0,0,0.853153002140936,0.464473343720877,0.38660238396628,0.201683524623343,0,0.190225626112559,0,0,0,0.198956472041151,0,0,0,0,0.758671603812327,0.685491075658373,2.25415471346161,0.203651327845314,0.581857461502877,0.280543279561274,0.442655759869801,0.442830443938806,0.156998727841375,0.246794327843601,0,0,0,0,0.405720242777006,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0.162964976442026,0.509235257325564,0,0.167506257441816,0.238043640886014,0.195133647857799,0.157635144106191,0.221464689648775,0.318909537314974,0,0.172684981865896,0.289298117163023,0,0,0,0,0.963303539926752,0.586058432961016,0.655739781506702,0,0.631016438832513,0.780877488593277,0.646270193198397,0.477937595905104,0.445597348164788,0.283076530788832,0,0.292255857911312,2.37172666767914,2.24924921495265,0.283880170416537,0,0.325773918707152,0.164970122972535,0,0.242780636154981,0,0.377210159511796,0.590603785761546,0,0,0,0.356497378384721,0,0,0,1.02131881726136,0.36012218806262,0.517434735131018,0.428674070063185,1.06404140185364,1.60531935841864,1.31639216481697,0,0,0,0.220528398054962,0.32977250588296,0.161464426695906,0.422190474497091,0.477489376012546,0.656563598980245,0,0.741701208042039,0.341741761595705,0.619160603889667,0,0,0,0,0.339956859987711,0.279902904647316,0,0,1.10717597753397,0.813277868507395,0.216010681643603,0.418176592028937,0.87345025498471,0.674321731924103,0.165306911450672,0,0.129614973291793,0,0.56369293868419,0.448549638131936,0.827292452285488,0.583353565032143,0.387479470433193,0.337912250981556,0.234714477291508,0.5208175393758,0.314578033277133,0,0.288030006257865,0,0.405450430580328,0.513554785824136,0.389762468933385,0.358053391334963,0.39736270956253,0.120195449519969,0.147689527174577,0.403865799792591,0.381034033274999,0.201652370273681,0.292373642219257,0.0962118416403295,0.116876902181569,0.226730383615211,0.221985953374065,0.0897138566094757,0,0.19318959403219,0,0,0.857473516316263,0,1.6942555278512,1.38097570952153,1.14579102687879,1.3748254587495,2.05524755931193,2.2661816921691,2.02506750069542,2.70192721934532,0,0.51776031175182,0.518936737920883,0,0.512200817262403,0.729320151204882,1.04806581313991,0.183843508450014,0.44449345560323,0.618105171716683,0,0.505394423527595,0.760437899670719,0,0.468207537349412,0.448176066834085,0.402048282689293,0.952587382566147,1.15884325944855,0.192909220463705,0.412085900803307,0.588795680537589,0.685738504770831,0,0.238436189947321,0.726732083161643,0.376437521661322,0.423073039458382,0.182927972872773,1.05227884575137,0.135804113845862,0,0.711810108745045,0.492522411877817,0,0.309873682371932,0.385813221962283,0.749431733813838,0.701794825336225,0.429742108096597,0.191288332068843,0,0.231867835620421 | |||
|short_description=p4@Tia1 | |||
}} |
Revision as of 05:40, 6 August 2015
Short description: | p4@Tia1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Tia1_5end |
Coexpression cluster: | NA |
Association with transcript: | -20bp_to_ENSMUST00000095753, ENSMUST00000095754, NM_001164078, NM_001164079, NM_011585, uc009crp.2, uc009crq.2, uc009crr.2, uc012eok.1_5end |
EntrezGene: | 21841 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.76e-16 | 23 |
neuroblast (sensu Vertebrata) | 6.76e-16 | 23 |
neuron | 2.40e-13 | 33 |
neuronal stem cell | 2.40e-13 | 33 |
neuroblast | 2.40e-13 | 33 |
electrically signaling cell | 2.40e-13 | 33 |
neuron of cerebral cortex | 2.77e-11 | 6 |
electrically responsive cell | 1.23e-10 | 39 |
electrically active cell | 1.23e-10 | 39 |
neural cell | 1.52e-10 | 43 |
ectodermal cell | 3.33e-10 | 44 |
neurectodermal cell | 3.33e-10 | 44 |
granule cell | 2.23e-07 | 3 |