FFCP PHASE1:Mm9::chrX:58439053..58439064,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=145 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chrX:58439053..58439064,+ | |||
|description=CAGE_peak_at_chrX:58439053..58439064,+ | |description=CAGE_peak_at_chrX:58439053..58439064,+ | ||
|id=chrX:58439053..58439064,+ | |id=chrX:58439053..58439064,+ | ||
|ontology_enrichment_celltype=CL:0000117!4.37e-13!23;CL:0000337!4.37e-13!23;CL:0000540!4.26e-08!33;CL:0000047!4.26e-08!33;CL:0000031!4.26e-08!33;CL:0000404!4.26e-08!33;CL:0002610!1.77e-07!3;CL:0002612!9.06e-07!3 | |ontology_enrichment_celltype=CL:0000117!4.37e-13!23;CL:0000337!4.37e-13!23;CL:0000540!4.26e-08!33;CL:0000047!4.26e-08!33;CL:0000031!4.26e-08!33;CL:0000404!4.26e-08!33;CL:0002610!1.77e-07!3;CL:0002612!9.06e-07!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002610,5.03e-15,3;CL:0002612,3.71e-07,3;CL:0000117,8.40e-07,23;CL:0000337,8.40e-07,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.07e-32!52;UBERON:0005068!1.07e-32!52;UBERON:0006241!1.07e-32!52;UBERON:0007135!1.07e-32!52;UBERON:0000955!1.92e-32!50;UBERON:0006238!1.92e-32!50;UBERON:0001017!3.68e-32!73;UBERON:0005743!3.68e-32!73;UBERON:0000073!4.80e-31!75;UBERON:0001016!4.80e-31!75;UBERON:0002616!8.50e-31!49;UBERON:0002020!1.50e-26!34;UBERON:0000033!8.81e-26!63;UBERON:0002346!2.99e-23!71;UBERON:0003075!2.99e-23!71;UBERON:0007284!2.99e-23!71;UBERON:0004121!1.26e-21!102;UBERON:0000924!1.26e-21!102;UBERON:0006601!1.26e-21!102;UBERON:0002791!3.10e-21!29;UBERON:0003528!3.10e-21!29;UBERON:0001893!3.10e-21!29;UBERON:0003080!3.87e-21!40;UBERON:0002780!1.01e-19!39;UBERON:0001890!1.01e-19!39;UBERON:0006240!1.01e-19!39;UBERON:0002021!7.63e-19!10;UBERON:0000411!7.63e-19!10;UBERON:0001950!7.63e-19!10;UBERON:0003056!1.08e-17!49;UBERON:0000956!3.51e-17!21;UBERON:0001869!3.51e-17!21;UBERON:0000203!3.51e-17!21;UBERON:0002619!1.14e-16!17;UBERON:0007811!1.33e-16!86;UBERON:0000153!1.80e-14!94;UBERON:0003076!3.15e-12!12;UBERON:0003057!3.15e-12!12;UBERON:0002298!1.47e-10!6;UBERON:0000025!2.50e-10!114;UBERON:0004111!4.04e-09!122;UBERON:0002240!2.76e-08!6;UBERON:0005174!2.76e-08!6;UBERON:0001137!2.76e-08!6;UBERON:0004684!1.77e-07!3;UBERON:0002275!1.77e-07!3;UBERON:0002950!1.92e-07!4;UBERON:0001891!1.92e-07!4;UBERON:0009616!1.92e-07!4;UBERON:0002257!9.06e-07!3 | |ontology_enrichment_uberon=UBERON:0001049!1.07e-32!52;UBERON:0005068!1.07e-32!52;UBERON:0006241!1.07e-32!52;UBERON:0007135!1.07e-32!52;UBERON:0000955!1.92e-32!50;UBERON:0006238!1.92e-32!50;UBERON:0001017!3.68e-32!73;UBERON:0005743!3.68e-32!73;UBERON:0000073!4.80e-31!75;UBERON:0001016!4.80e-31!75;UBERON:0002616!8.50e-31!49;UBERON:0002020!1.50e-26!34;UBERON:0000033!8.81e-26!63;UBERON:0002346!2.99e-23!71;UBERON:0003075!2.99e-23!71;UBERON:0007284!2.99e-23!71;UBERON:0004121!1.26e-21!102;UBERON:0000924!1.26e-21!102;UBERON:0006601!1.26e-21!102;UBERON:0002791!3.10e-21!29;UBERON:0003528!3.10e-21!29;UBERON:0001893!3.10e-21!29;UBERON:0003080!3.87e-21!40;UBERON:0002780!1.01e-19!39;UBERON:0001890!1.01e-19!39;UBERON:0006240!1.01e-19!39;UBERON:0002021!7.63e-19!10;UBERON:0000411!7.63e-19!10;UBERON:0001950!7.63e-19!10;UBERON:0003056!1.08e-17!49;UBERON:0000956!3.51e-17!21;UBERON:0001869!3.51e-17!21;UBERON:0000203!3.51e-17!21;UBERON:0002619!1.14e-16!17;UBERON:0007811!1.33e-16!86;UBERON:0000153!1.80e-14!94;UBERON:0003076!3.15e-12!12;UBERON:0003057!3.15e-12!12;UBERON:0002298!1.47e-10!6;UBERON:0000025!2.50e-10!114;UBERON:0004111!4.04e-09!122;UBERON:0002240!2.76e-08!6;UBERON:0005174!2.76e-08!6;UBERON:0001137!2.76e-08!6;UBERON:0004684!1.77e-07!3;UBERON:0002275!1.77e-07!3;UBERON:0002950!1.92e-07!4;UBERON:0001891!1.92e-07!4;UBERON:0009616!1.92e-07!4;UBERON:0002257!9.06e-07!3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.48e-22,73;UBERON:0000073,1.41e-21,54;UBERON:0001016,3.38e-21,75;UBERON:0002021,4.47e-21,10;UBERON:0000411,4.47e-21,10;UBERON:0001950,4.47e-21,10;UBERON:0001049,7.08e-17,52;UBERON:0005068,7.08e-17,52;UBERON:0006241,7.08e-17,52;UBERON:0007135,7.08e-17,52;UBERON:0004121,3.75e-16,95;UBERON:0000924,3.75e-16,95;UBERON:0006601,3.75e-16,95;UBERON:0004684,5.03e-15,3;UBERON:0002275,5.03e-15,3;UBERON:0000955,8.77e-14,47;UBERON:0006238,8.77e-14,47;UBERON:0002346,2.94e-13,64;UBERON:0003075,2.94e-13,64;UBERON:0007284,2.94e-13,64;UBERON:0002619,4.15e-12,17;UBERON:0002616,6.40e-12,46;UBERON:0002020,1.12e-11,34;UBERON:0010371,2.54e-11,73;UBERON:0000956,1.17e-09,21;UBERON:0001869,1.17e-09,21;UBERON:0000203,1.17e-09,21;UBERON:0003076,1.62e-09,12;UBERON:0003057,1.62e-09,12;UBERON:0003080,1.96e-09,40;UBERON:0003528,8.89e-09,29;UBERON:0002791,8.89e-09,29;UBERON:0001893,8.89e-09,29;UBERON:0010314,1.81e-08,92;UBERON:0002780,7.24e-08,39;UBERON:0001890,7.24e-08,39;UBERON:0006240,7.24e-08,39;UBERON:0002240,1.96e-07,6;UBERON:0005174,1.96e-07,6;UBERON:0001137,1.96e-07,6;UBERON:0003056,2.00e-07,49;UBERON:0002257,3.71e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,1.05798195854407,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0.571301968807607,0,0,0.191690942036473,0,7.70811166995721,4.85211884723713,5.52983519722476,0,0,0,0.558365998002762,0.56276261003168,0.15279824777681,12.0797720044204,3.27454865837937,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27005434620785,4.1889341362691,0,0,0,0,1.3481157546434,1.37250180845588,0.251308704225729,0.695297280769106,0.767146371990992,1.0389402227978,0.324482526135515,0,0,0,0,0,0,0,0,0,0,0,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642202359951168,0.703270119553219,0,0,0,0,0,0,0,0,0,0,0,1.92792789853084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.78137953015765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.51801474093653,1.84130094602871,3.43737308063638,4.1244763762485,0.685082519770642,4.5323633843382,1.35004500046361,0.900642406448441,1.35942722695261,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.128050304809739,0,0,0.115884325944855,0,0,0.294397840268795,0,0,0,0,0,0,0.182927972872773,0,0.135804113845862,0,0,0.0985044823755635,0.409231043169689,0,0,0,0.233931608445408,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,1.05798195854407,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0.571301968807607,0,0,0.191690942036473,0,7.70811166995721,4.85211884723713,5.52983519722476,0,0,0,0.558365998002762,0.56276261003168,0.15279824777681,12.0797720044204,3.27454865837937,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27005434620785,4.1889341362691,0,0,0,0,1.3481157546434,1.37250180845588,0.251308704225729,0.695297280769106,0.767146371990992,1.0389402227978,0.324482526135515,0,0,0,0,0,0,0,0,0,0,0,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642202359951168,0.703270119553219,0,0,0,0,0,0,0,0,0,0,0,1.92792789853084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.78137953015765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.51801474093653,1.84130094602871,3.43737308063638,4.1244763762485,0.685082519770642,4.5323633843382,1.35004500046361,0.900642406448441,1.35942722695261,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.128050304809739,0,0,0.115884325944855,0,0,0.294397840268795,0,0,0,0,0,0,0.182927972872773,0,0.135804113845862,0,0,0.0985044823755635,0.409231043169689,0,0,0,0.233931608445408,0,0,0,0 | ||
|short_description=p@chrX:58439053..58439064,+ | |short_description=p@chrX:58439053..58439064,+ | ||
}} | }} |
Latest revision as of 09:02, 6 August 2015
Short description: | p@chrX:58439053..58439064, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chrX:58439053..58439064, + |
Coexpression cluster: | MCL_coexpression_mm9:145 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 5.03e-15 | 3 |
neuron of the ventral spinal cord | 3.71e-07 | 3 |
CNS neuron (sensu Vertebrata) | 8.40e-07 | 23 |
neuroblast (sensu Vertebrata) | 8.40e-07 | 23 |