FFCP PHASE1:Mm9::chrX:70740195..70740217,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=188 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chrX:70740195..70740217,- | |||
|description=CAGE_peak_at_chrX:70740195..70740217,- | |description=CAGE_peak_at_chrX:70740195..70740217,- | ||
|id=chrX:70740195..70740217,- | |id=chrX:70740195..70740217,- | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,1.57e-13,6;CL:0000187,1.57e-13,6;CL:0000056,1.57e-13,6;CL:0000222,1.85e-11,7;CL:0000355,1.07e-08,9;CL:0002494,9.28e-08,3;CL:0000737,9.28e-08,3;CL:0000746,9.28e-08,3;CL:0000513,9.28e-08,3;CL:0000192,2.22e-07,3;CL:0000359,2.22e-07,3;CL:0002539,2.22e-07,3;CL:0000514,2.22e-07,3;CL:0000151,8.93e-07,3;CL:0000499,8.93e-07,3;CL:0000327,8.93e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!6.55e-09!33;UBERON:0000926!1.31e-07!193;UBERON:0004120!1.31e-07!193;UBERON:0006603!1.31e-07!193;UBERON:0004535!2.73e-07!23;UBERON:0001009!2.73e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.07e-08,9;UBERON:0002036,1.07e-08,9;UBERON:0002385,1.07e-08,9;UBERON:0000486,1.07e-08,9;UBERON:0007503,1.07e-08,9;UBERON:0001015,1.07e-08,9;UBERON:0002329,1.07e-08,9;UBERON:0003082,1.07e-08,9;UBERON:0003059,1.07e-08,9;UBERON:0007282,1.07e-08,9;UBERON:0004290,1.07e-08,9;UBERON:0009618,1.07e-08,9;UBERON:0000383,9.85e-08,10;UBERON:0001135,2.22e-07,3;UBERON:0004237,2.22e-07,3;UBERON:0004695,2.22e-07,3;UBERON:0002111,2.22e-07,3;UBERON:0004178,2.22e-07,3;UBERON:0007524,6.06e-07,11;UBERON:0003077,6.06e-07,11;UBERON:0007285,6.06e-07,11 | |||
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|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.15459499319405,3.24406179902447,3.67093504323363,4.69434806608824,0.218025156380447,0.659058548203415,0.388859798148567,1.39986421625363,0,0,0,0,6.17422646486273,6.01720223871389,9.7977697532714,0,0,0,1.69422266034566,4.4464739805557,0.899899717281399,2.96659908770092,0,1.79760066311043,1.53687322128622,0.414758449233911,0,0,0,0,0.122490799214954,0,0,0,0,0,0.131886287730194,0,0.52091337055676,0,0,0,0,0.284743361598206,0,0,0.0755715601067855,0.579728977403356,1.72084775396277,0,0,0,0,0,4.4311883870295,22.6013824004496,17.666978725517,0.14084341977668,1.28326477414318,0,0,0,0,0,0.22836775943812,0,0,0.173485326766136,0.913396434936424,0.461230994512117,0.753613202763113,0.823120949949934,0.628332956648377,0.494389935468748,0.86759614151947,0,2.26473589926373,1.10420759230197,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0.712875546952214,1.61729061793121,0.252722758433675,0.210441855886474,0.260240885925407,0.459804208866946,0,0.90422890701429,0.476255494059295,1.0249097622788,0.562210347358373,0.258703370739016,0,0.189106080167819,0.175951124163949,0.876782929710299,1.11218899690239,1.0447564995665,2.67516777330327,0.796137067273973,0,0,0,0,0.469052119962192,0.36012412292203,0,0.787056926989615,0.617068451549513,0.465067889500816,0.536546802799238,0.583826711835847,0.987359099480883,1.64167464079095,0.162137619091711,0.438599962275997,1.09775057645525,0.671032093801859,0,0.205809224758569,0,0,0.213288250535234,0.464473343720877,0.257734922644187,0.201683524623343,0.22237804384487,0.190225626112559,0.474529061544512,0.494096864172033,0.502670417600539,0.198956472041151,0,0,0.648414149624083,0.199141273254367,0,0.456994050438915,0,0.407302655690628,0.775809948670503,0.140271639780637,0.69560190836683,0.147610147979602,1.255989822731,0.370191491765402,0,0,0,0.449724224769707,0,0.241177159752417,0.25462585178142,0.287696137450811,0.324270453550071,0,0,0.372140947668503,0.624075346229121,0.505157755894224,0.179397413521912,0,0.739012760666419,0,0.162964976442026,0.848725428875941,1.17345124144251,0.335012514883631,0.952174563544055,0.975668239288994,0.788175720530955,1.7717175171902,1.59454768657487,2.94953966488328,2.76295970985433,2.16973587872267,0,0,0,0.551873492609465,0,0.234423373184406,1.63934945376675,0.757412781613119,0.315508219416257,0,0,0,0,0,0,0.292255857911312,0.395287777946524,0,0.709700426041343,1.78065603667255,2.93196526836437,0,0,0,0,0.188605079755898,0,0,0,0.727067458955011,0,0,0,0,0,0.18006109403131,0.646793418913773,0,0.532020700926821,0.356737635204141,0.658196082408484,1.2178597964584,0,0.42366414172764,0.220528398054962,0.32977250588296,0.645857706783622,0.844380948994182,0.716234064018819,0.164140899745061,0,0,0.683483523191411,1.23832120777933,0.740778109478847,0.376736914009382,0.27338845544205,0.457556346413045,0,0,0.138199973804424,0,0.316335993581135,0.203319467126849,0.648032044930808,0.209088296014469,0.655087691238533,0.539457385539283,0.41326727862668,0.26175594198403,0.129614973291793,0.621339313086926,0,0.448549638131936,0.992750942742586,0.583353565032143,1.03327858782185,2.02747350588934,1.40828686374905,0.39061315453185,0.104859344425711,0,0.288030006257865,0.316011120628178,0.405450430580328,0.513554785824136,0.25984164595559,0.179026695667481,0,0,0,0.100966449948148,0.0762068066549998,0.100826185136841,0.0974578807397524,0,0.116876902181569,0.453460767230423,0,0.0897138566094757,0,1.54551675225752,0.93841237725591,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0.486213434136588,0,0,0,0.412070114477788,0,0,0,0.565879024158229,0.37456602987953,0.192075457214608,0.287177344778066,0,0,0.192909220463705,0,0.147198920134397,0.342869252385415,0,0,0,0,0.338458431566706,0,0,0.271608227691724,0,0.237270036248348,0.0985044823755635,0.818462086339379,0.154936841185966,0.771626443924566,1.74867404556562,1.16965804222704,0.644613162144895,1.72159498861959,2.20591419119516,0.927471342481686 | ||
|short_description=p@chrX:70740195..70740217,- | |short_description=p@chrX:70740195..70740217,- | ||
}} | }} |
Latest revision as of 10:00, 6 August 2015
Short description: | p@chrX:70740195..70740217, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chrX:70740195..70740217, - |
Coexpression cluster: | MCL_coexpression_mm9:188 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 1.57e-13 | 6 |
muscle cell | 1.57e-13 | 6 |
myoblast | 1.57e-13 | 6 |
mesodermal cell | 1.85e-11 | 7 |
multi-potent skeletal muscle stem cell | 1.07e-08 | 9 |
cardiocyte | 9.28e-08 | 3 |
striated muscle cell | 9.28e-08 | 3 |
cardiac muscle cell | 9.28e-08 | 3 |
cardiac muscle myoblast | 9.28e-08 | 3 |
smooth muscle cell | 2.22e-07 | 3 |
vascular associated smooth muscle cell | 2.22e-07 | 3 |
aortic smooth muscle cell | 2.22e-07 | 3 |
smooth muscle myoblast | 2.22e-07 | 3 |
secretory cell | 8.93e-07 | 3 |
stromal cell | 8.93e-07 | 3 |
extracellular matrix secreting cell | 8.93e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 1.07e-08 | 9 |
striated muscle tissue | 1.07e-08 | 9 |
muscle tissue | 1.07e-08 | 9 |
multilaminar epithelium | 1.07e-08 | 9 |
epithelial vesicle | 1.07e-08 | 9 |
musculature | 1.07e-08 | 9 |
somite | 1.07e-08 | 9 |
myotome | 1.07e-08 | 9 |
presomitic mesoderm | 1.07e-08 | 9 |
presumptive segmental plate | 1.07e-08 | 9 |
dermomyotome | 1.07e-08 | 9 |
trunk paraxial mesoderm | 1.07e-08 | 9 |
musculature of body | 9.85e-08 | 10 |
smooth muscle tissue | 2.22e-07 | 3 |
blood vessel smooth muscle | 2.22e-07 | 3 |
arterial system smooth muscle | 2.22e-07 | 3 |
artery smooth muscle tissue | 2.22e-07 | 3 |
aorta smooth muscle tissue | 2.22e-07 | 3 |
dense mesenchyme tissue | 6.06e-07 | 11 |
paraxial mesoderm | 6.06e-07 | 11 |
presumptive paraxial mesoderm | 6.06e-07 | 11 |