FFCP PHASE1:Hg19::chr12:89920030..89920039,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:89920030..89920039,-
|short_description=p10@POC1B,p4@POC1B-GALNT4
|description=CAGE_peak_10_at_POC1B_5end,CAGE_peak_4_at_POC1B-GALNT4_5end
|association_wi...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=100528030,282809 | |EntrezGene=100528030,282809 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=42957,30836 | |HGNC=42957,30836 | ||
|TSSclassifier=strong | |||
|UniProt=B4DMX6,F8VZB3,F8VUJ3,A0MNP0,Q8TC44 | |UniProt=B4DMX6,F8VZB3,F8VUJ3,A0MNP0,Q8TC44 | ||
|association_with_transcript=0bp_to_ENST00000413530,ENST00000547474,NM_001199781,NM_001199782,NM_172240,NR_037659_5end | |||
|cluster_id=chr12:89920030..89920039,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_10_at_POC1B_5end,CAGE_peak_4_at_POC1B-GALNT4_5end | |||
|id=chr12:89920030..89920039,- | |||
|ontology_enrichment_celltype=CL:0002057!2.93e-32!42;CL:0000860!3.96e-29!45;CL:0000766!5.65e-26!76;CL:0000839!2.60e-25!70;CL:0000738!6.50e-25!140;CL:0002031!1.28e-23!124;CL:0000557!3.30e-23!71;CL:0002009!1.80e-22!65;CL:0002194!2.33e-22!63;CL:0000576!2.33e-22!63;CL:0000040!2.33e-22!63;CL:0000559!2.33e-22!63;CL:0002087!5.18e-22!119;CL:0000037!3.13e-21!172;CL:0000566!3.13e-21!172;CL:0002032!5.02e-19!165;CL:0000837!5.02e-19!165;CL:0000988!1.11e-18!182;CL:0000763!6.63e-18!112;CL:0000049!6.63e-18!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.35e-62;33!CL:0002057;1.35e-62;33!CL:0000473;1.35e-41;39!CL:0000234;1.35e-41;39!CL:0000576;1.66e-36;48!CL:0000766;2.20e-24;69!CL:0000763;1.42e-11;100!CL:0002087;2.54e-11;104!CL:0002393;3.90e-10;6!CL:0002397;3.90e-10;6!CL:0000738;9.98e-09;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.46e-71,42;CL:0002057,6.46e-71,42;CL:0000473,1.58e-61,48;CL:0000234,1.58e-61,48;CL:0000839,2.08e-51,66;CL:0000766,3.65e-51,72;CL:0000557,1.38e-50,67;CL:0002194,2.25e-48,59;CL:0000576,2.25e-48,59;CL:0000040,2.25e-48,59;CL:0000559,2.25e-48,59;CL:0002009,1.12e-46,61;CL:0000763,9.92e-33,108;CL:0000049,9.92e-33,108;CL:0002031,1.66e-31,120;CL:0000738,9.27e-30,136;CL:0002087,9.46e-28,115;CL:0002032,2.08e-24,161;CL:0000837,2.08e-24,161;CL:0000037,3.42e-23,168;CL:0000988,9.06e-22,177;CL:0000134,2.34e-09,354;CL:0002320,4.49e-09,361;CL:0000219,4.48e-08,386;CL:0000034,3.12e-07,441;CL:0002393,6.69e-07,9;CL:0002397,6.69e-07,9;CL:0000048,7.50e-07,427 | |||
|ontology_enrichment_development_v019=CL:0002057;1.39e-48;42!CL:0000049;2.95e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;2.99e-08;1!DOID:4549;2.99e-08;1!DOID:5861;2.99e-08;1!DOID:6496;2.99e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,2.70e-08,1;DOID:4549,2.70e-08,1;DOID:5861,2.70e-08,1;DOID:6496,2.70e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0002371!6.21e-20!80;UBERON:0001474!1.59e-19!86;UBERON:0002390!2.95e-18!102;UBERON:0003061!2.95e-18!102;UBERON:0002193!4.35e-15!112;UBERON:0004765!2.96e-14!101;UBERON:0001434!2.96e-14!101;UBERON:0002405!9.37e-13!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,1.74e-44,82;UBERON:0002371,3.81e-44,76;UBERON:0004765,3.62e-40,90;UBERON:0001434,9.95e-36,100;UBERON:0002405,2.43e-35,93;UBERON:0002390,2.52e-33,98;UBERON:0003061,2.52e-33,98;UBERON:0002193,7.58e-30,108;UBERON:0002204,1.37e-19,167;UBERON:0003081,8.86e-14,203;UBERON:0002384,1.09e-08,371;UBERON:0000926,3.19e-07,315;UBERON:0004120,3.19e-07,315;UBERON:0006603,3.19e-07,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.436882744260345,0.263766978228454,0,0,0,0,0,0,0,0,0,0.286235987131057,0.410623275218653,0.251085279189606,0,0,0.0787107813136792,0.393364276848904,0.383829398097213,0.154816123316076,0,0,0,0,0,0.293600439334847,1.66198622559563,1.20326668482085,2.60413044859022,0,0,0.257575567634187,0.145398238779565,0.377875943688809,0.485168122375632,1.62700325833979,0.411167888021826,0.929119112685311,3.74000110018796,2.30544635876191,3.54723344832878,2.75796544589295,5.16387746867061,2.70852973188684,0.752969358170419,0,0.449446968890169,3.06083892370903,1.60464513538047,3.19668562899521,0,2.19410023383795,1.27867425159808,0.870627715885752,1.70215567407342,1.86846674698672,4.27122730936464,5.73631210262222,5.2125322729228,0.605399502633369,2.20966581592539,2.84816148696796,0,0.212604299965044,0.209658645508376,0.22465726229299,0.300353785683013,0.16072558669708,0,0,0,0,0,0,0,0,0,0.661044872784862,0,1.70763890732835,1.17447437874188,0.764546456250458,0,1.12101712596307,0,0.393419540227666,0.786021525498329,0,0,0,0,0,0.334231370655521,0,0.664601683750863,0.270803863765016,0.128091319725675,0,0,0,0,0,0,1.04535523804977,0.113309342697566,0.766440987203842,0.34362744548263,0,0,0.651083453856419,0,0.150575119077773,0.127986611154418,0,0,0,0.201606743224732,0,0.434473211648397,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0,0,0.130979075497713,0,0,0.324547393654683,0,0,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0,0,0,0,0,0,0,0.0974370051611986,0.252433774244115,0,0.161646056818812,0,0,0,0,0,0,0,0,0.116193942869518,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0.109750285408626,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,1.86595303986695,0.144119953416961,1.2624243342638,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0,0.788123040807709,0.431255149719035,0.385029108839245,0,0,0,0.335032530668698,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0,0,0,0.206768026122887,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.877039506583738,0.261435451024901,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487426979262569,0,0,0,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0.144269212976445,0.0711418433484141,0,0,0.191505370132367,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0.223676107892416,0,0,0.278406173895242,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,1.52581736317083,0,0.295547618953547,0.219385397153973,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0.126373159256976,0.150323419414493,0.103688191397247,0,0,0.313932918407225,0,0,0,0.173559738335131,0,0,0.17472666824203,0,0,0,0,0,5.73664823494752,0,0.137041924646751,0,0.253243183823515,0,0,0,0,0,0.458146384663663,0,0,0,0,0,0.104602846312333,0,0,0,0.136905378891993,0,0,0,0.558564802544508,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0.0846733320657845,0,0.136203406111576,0,0.137539436597234,0.415440338029185,0.2249738915515,0,0.0607495566580247,0,0.0788057072991982,0.0524545881349981,0,0.179287339332845,0,0,0,0.25426853765475,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0.327872630709804,0,0,0.122026264901963,0,0,0,0.0620964029413835,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0.471797825567689,0.109209638192014,0,0.212574920101683,0.123935764259002,0.558644917973244,0,0,0,0,0,0.0642292250964595,0,0,0.205116364240755,0.252071696221718,0.0691572524642179,0,0,0.0981477185010256,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0.535701835878287,0,0,0.227662191351298,0,0,0,0.0679697329768317,0.131545547125698,0,0,0.078493092850514,0.157115589916002,0,0,0,0,0,0,0.348724276104376,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0.233939463462106,0,0,0,0.109940516745429,0,0,0,0,0,0,0.196308467114945,0.297046400327086,0,0,0,0.128915775947154,0,0,0,0,0,0,0.143339583151451,0,0.135982980381829,0,0,0,0,0,0,0,0.253397002022874,0,0,0.0918948995348449,0,0.0757786982182394,0.535928260312357,0,0,0,0,0,0.248298857183432,0,0,0,0,0,0,0.143444410785353,0,0.0814032686109745,0,0,0,0,0,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| ||
|short_description=p10@POC1B,p4@POC1B-GALNT4 | |||
}} | }} |
Latest revision as of 17:55, 15 September 2015
Short description: | p10@POC1B, p4@POC1B-GALNT4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_POC1B_5end, CAGE_peak_4_at_POC1B-GALNT4_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 0bp_to_ENST00000413530, ENST00000547474, NM_001199781, NM_001199782, NM_172240, NR_037659_5end |
EntrezGene: | 100528030,282809 |
HGNC: | 30836&submit=Submit 42957, 30836 |
UniProt: | B4DMX6F8VZB3F8VUJ3A0MNP0Q8TC44 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.46e-71 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.46e-71 | 42 |
defensive cell | 1.58e-61 | 48 |
phagocyte | 1.58e-61 | 48 |
myeloid lineage restricted progenitor cell | 2.08e-51 | 66 |
myeloid leukocyte | 3.65e-51 | 72 |
granulocyte monocyte progenitor cell | 1.38e-50 | 67 |
monopoietic cell | 2.25e-48 | 59 |
monocyte | 2.25e-48 | 59 |
monoblast | 2.25e-48 | 59 |
promonocyte | 2.25e-48 | 59 |
macrophage dendritic cell progenitor | 1.12e-46 | 61 |
myeloid cell | 9.92e-33 | 108 |
common myeloid progenitor | 9.92e-33 | 108 |
hematopoietic lineage restricted progenitor cell | 1.66e-31 | 120 |
leukocyte | 9.27e-30 | 136 |
nongranular leukocyte | 9.46e-28 | 115 |
hematopoietic oligopotent progenitor cell | 2.08e-24 | 161 |
hematopoietic multipotent progenitor cell | 2.08e-24 | 161 |
hematopoietic stem cell | 3.42e-23 | 168 |
hematopoietic cell | 9.06e-22 | 177 |
mesenchymal cell | 2.34e-09 | 354 |
connective tissue cell | 4.49e-09 | 361 |
motile cell | 4.48e-08 | 386 |
stem cell | 3.12e-07 | 441 |
intermediate monocyte | 6.69e-07 | 9 |
CD14-positive, CD16-positive monocyte | 6.69e-07 | 9 |
multi fate stem cell | 7.50e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
bone element | 1.74e-44 | 82 |
bone marrow | 3.81e-44 | 76 |
skeletal element | 3.62e-40 | 90 |
skeletal system | 9.95e-36 | 100 |
immune system | 2.43e-35 | 93 |
hematopoietic system | 2.52e-33 | 98 |
blood island | 2.52e-33 | 98 |
hemolymphoid system | 7.58e-30 | 108 |
musculoskeletal system | 1.37e-19 | 167 |
lateral plate mesoderm | 8.86e-14 | 203 |
connective tissue | 1.09e-08 | 371 |
mesoderm | 3.19e-07 | 315 |
mesoderm-derived structure | 3.19e-07 | 315 |
presumptive mesoderm | 3.19e-07 | 315 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 2.70e-08 | 1 |
extraosseous chondrosarcoma | 2.70e-08 | 1 |
myxoid chondrosarcoma | 2.70e-08 | 1 |
extraskeletal myxoid chondrosarcoma | 2.70e-08 | 1 |