FFCP PHASE1:Hg19::chr5:14441117..14441141,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7204 | |EntrezGene=7204 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12303 | |HGNC=12303 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=189bp_to_ENST00000515710,uc003jfi.1_5end | |association_with_transcript=189bp_to_ENST00000515710,uc003jfi.1_5end | ||
|cluster_id=chr5:14441117..14441141,+ | |||
|coexpression_cluster_id=C950 | |coexpression_cluster_id=C950 | ||
|description=CAGE_peak_5_at_TRIO_5end | |description=CAGE_peak_5_at_TRIO_5end | ||
|id=chr5:14441117..14441141,+ | |id=chr5:14441117..14441141,+ | ||
|ontology_enrichment_celltype=CL:0000723;6.02e-07;61!CL:0000188;9.11e-07;9 | |ontology_enrichment_celltype=CL:0000055!4.73e-20!180;CL:0000183!2.70e-15!59;CL:0000680!6.67e-15!57;CL:0000056!6.67e-15!57;CL:0000355!6.67e-15!57;CL:0000187!1.15e-13!54;CL:0000393!6.00e-12!60;CL:0000211!6.00e-12!60;CL:0000057!5.25e-11!75;CL:0000192!2.59e-10!42;CL:0000514!2.59e-10!42;CL:0000359!2.23e-07!32 | ||
| | |ontology_enrichment_celltype_v019=CL:0000723;6.02e-07;61!CL:0000188;9.11e-07;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000680,7.38e-11,58;CL:0000056,7.38e-11,58;CL:0000355,7.38e-11,58;CL:0000187,1.73e-09,55;CL:0000393,2.72e-08,61;CL:0000211,2.72e-08,61;CL:0000057,4.66e-07,76;CL:0000188,6.55e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0002385;2.13e-11;31!UBERON:0001015;2.13e-11;31!UBERON:0000383;2.13e-11;31!UBERON:0001950;1.33e-10;20!UBERON:0002619;1.93e-10;22!UBERON:0001869;1.41e-08;32!UBERON:0002780;1.48e-08;41!UBERON:0001890;1.48e-08;41!UBERON:0000956;1.50e-08;25!UBERON:0000203;1.50e-08;25!UBERON:0001893;2.22e-08;34!UBERON:0001134;2.46e-08;16!UBERON:0002036;2.46e-08;16!UBERON:0002791;5.90e-08;32!UBERON:0001017;1.01e-07;75!UBERON:0003528;1.70e-07;34!UBERON:0002020;1.70e-07;34!UBERON:0002067;4.10e-07;9!UBERON:0000073;7.41e-07;53!UBERON:0002616;7.41e-07;53 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!2.99e-21!365;UBERON:0004290!2.56e-20!70;UBERON:0000073!1.68e-19!94;UBERON:0001016!1.68e-19!94;UBERON:0001017!6.73e-19!82;UBERON:0005743!1.24e-18!86;UBERON:0000955!4.28e-18!69;UBERON:0006238!4.28e-18!69;UBERON:0000914!5.05e-18!83;UBERON:0002329!5.05e-18!83;UBERON:0003077!5.05e-18!83;UBERON:0003059!5.05e-18!83;UBERON:0007282!5.05e-18!83;UBERON:0009618!5.05e-18!83;UBERON:0007285!5.05e-18!83;UBERON:0002616!6.99e-18!59;UBERON:0000119!1.29e-17!312;UBERON:0003075!1.10e-16!86;UBERON:0007284!1.10e-16!86;UBERON:0007023!1.12e-16!115;UBERON:0002346!1.79e-16!90;UBERON:0002385!2.08e-16!63;UBERON:0001015!2.08e-16!63;UBERON:0000383!2.08e-16!63;UBERON:0000483!2.52e-16!309;UBERON:0000481!2.57e-16!347;UBERON:0001049!3.00e-16!57;UBERON:0005068!3.00e-16!57;UBERON:0006241!3.00e-16!57;UBERON:0007135!3.00e-16!57;UBERON:0001134!3.26e-16!61;UBERON:0002036!3.26e-16!61;UBERON:0003082!3.26e-16!61;UBERON:0000486!1.37e-14!82;UBERON:0000153!1.40e-14!129;UBERON:0007811!1.40e-14!129;UBERON:0000033!5.50e-14!123;UBERON:0003056!1.10e-13!61;UBERON:0000924!1.25e-13!173;UBERON:0006601!1.25e-13!173;UBERON:0004121!1.41e-13!169;UBERON:0003080!1.46e-13!42;UBERON:0002780!3.62e-13!41;UBERON:0001890!3.62e-13!41;UBERON:0006240!3.62e-13!41;UBERON:0000468!5.59e-13!659;UBERON:0001893!1.58e-11!34;UBERON:0001869!3.00e-11!32;UBERON:0000025!3.28e-11!194;UBERON:0002020!3.51e-11!34;UBERON:0003528!3.51e-11!34;UBERON:0002791!3.83e-11!33;UBERON:0000479!1.02e-10!787;UBERON:0000467!5.63e-10!625;UBERON:0000480!7.98e-10!626;UBERON:0000477!1.17e-09!286;UBERON:0000922!1.27e-09!612;UBERON:0002619!1.45e-09!22;UBERON:0000956!2.13e-09!25;UBERON:0000203!2.13e-09!25;UBERON:0002050!3.07e-09!605;UBERON:0005423!3.07e-09!605;UBERON:0001950!4.38e-09!20;UBERON:0005256!5.51e-09!143;UBERON:0000923!6.92e-09!604;UBERON:0005291!6.92e-09!604;UBERON:0006598!6.92e-09!604;UBERON:0002532!6.92e-09!604;UBERON:0004111!2.07e-08!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;2.13e-11;31!UBERON:0001015;2.13e-11;31!UBERON:0000383;2.13e-11;31!UBERON:0001950;1.33e-10;20!UBERON:0002619;1.93e-10;22!UBERON:0001869;1.41e-08;32!UBERON:0002780;1.48e-08;41!UBERON:0001890;1.48e-08;41!UBERON:0000956;1.50e-08;25!UBERON:0000203;1.50e-08;25!UBERON:0001893;2.22e-08;34!UBERON:0001134;2.46e-08;16!UBERON:0002036;2.46e-08;16!UBERON:0002791;5.90e-08;32!UBERON:0001017;1.01e-07;75!UBERON:0003528;1.70e-07;34!UBERON:0002020;1.70e-07;34!UBERON:0002067;4.10e-07;9!UBERON:0000073;7.41e-07;53!UBERON:0002616;7.41e-07;53 | |||
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| ||
|short_description=p5@TRIO | |short_description=p5@TRIO | ||
}} | }} |
Latest revision as of 19:24, 15 September 2015
Short description: | p5@TRIO |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TRIO_5end |
Coexpression cluster: | C950_liposarcoma_extraskeletal_Fibroblast_Smooth_Preadipocyte_neuroblastoma_mesenchymal |
Association with transcript: | 189bp_to_ENST00000515710, uc003jfi.1_5end |
EntrezGene: | TRIO |
HGNC: | 12303 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 7.38e-11 | 58 |
myoblast | 7.38e-11 | 58 |
multi-potent skeletal muscle stem cell | 7.38e-11 | 58 |
muscle cell | 1.73e-09 | 55 |
electrically responsive cell | 2.72e-08 | 61 |
electrically active cell | 2.72e-08 | 61 |
fibroblast | 4.66e-07 | 76 |
cell of skeletal muscle | 6.55e-07 | 9 |