FFCP PHASE1:Hg19::chr4:142558078..142558101,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:142558078..142558101,+ to FFCP PHASE1:Hg19::chr4:142558078..142558101,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3600 | |EntrezGene=3600 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5977 | |HGNC=5977 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000529613_5end | |||
|cluster_id=chr4:142558078..142558101,+ | |||
|coexpression_cluster_id=C681 | |||
|description=CAGE_peak_3_at_IL15_5end | |||
|id=chr4:142558078..142558101,+ | |||
|ontology_enrichment_celltype=CL:0000860!3.20e-32!45;CL:0002057!1.11e-31!42;CL:0002194!2.09e-26!63;CL:0000576!2.09e-26!63;CL:0000040!2.09e-26!63;CL:0000559!2.09e-26!63;CL:0002009!2.86e-26!65;CL:0000557!1.55e-22!71;CL:0000839!6.97e-22!70;CL:0000766!1.53e-21!76;CL:0002087!2.00e-10!119;CL:0000763!2.28e-10!112;CL:0000049!2.28e-10!112;CL:0000738!2.89e-10!140;CL:0002031!2.03e-08!124;CL:0002393!1.42e-07!9;CL:0002397!1.42e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.40e-47;33!CL:0002057;1.40e-47;33!CL:0000576;2.92e-34;48!CL:0000473;2.65e-32;39!CL:0000234;2.65e-32;39!CL:0000766;4.39e-20;69!CL:0002393;3.94e-10;6!CL:0002397;3.94e-10;6!CL:0000990;1.75e-08;8!CL:0002087;3.38e-08;104!CL:0000763;4.59e-08;100!CL:0000738;3.82e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.79e-66,42;CL:0002057,2.79e-66,42;CL:0000473,3.97e-56,48;CL:0000234,3.97e-56,48;CL:0002009,9.87e-49,61;CL:0002194,2.62e-48,59;CL:0000576,2.62e-48,59;CL:0000040,2.62e-48,59;CL:0000559,2.62e-48,59;CL:0000557,4.78e-43,67;CL:0000766,1.12e-42,72;CL:0000839,1.18e-41,66;CL:0000763,2.70e-29,108;CL:0000049,2.70e-29,108;CL:0000738,6.49e-24,136;CL:0002087,6.27e-22,115;CL:0002031,1.15e-18,120;CL:0000037,2.87e-16,168;CL:0002032,2.56e-15,161;CL:0000837,2.56e-15,161;CL:0000988,1.20e-14,177;CL:0002393,2.04e-14,9;CL:0002397,2.04e-14,9;CL:0000134,2.83e-10,354;CL:0002320,1.09e-09,361;CL:0000990,1.89e-08,8;CL:0000219,4.27e-08,386;CL:0000048,8.60e-07,427 | |||
|ontology_enrichment_development_v019=CL:0002057;7.82e-47;42!CL:0000049;3.17e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;2.94e-08;5!DOID:450;2.94e-08;5!DOID:66;2.94e-08;5!DOID:423;2.94e-08;5!DOID:0080000;2.94e-08;5!DOID:11722;2.94e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,2.18e-08,5;DOID:450,2.18e-08,5;DOID:66,2.18e-08,5;DOID:423,2.18e-08,5;DOID:0080000,2.18e-08,5;DOID:11722,2.18e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.11e-18!102;UBERON:0003061!3.11e-18!102;UBERON:0002371!6.63e-18!80;UBERON:0002193!2.12e-16!112;UBERON:0004765!2.46e-16!101;UBERON:0001434!2.46e-16!101;UBERON:0001474!4.99e-16!86;UBERON:0002405!1.91e-12!115;UBERON:0002204!2.02e-11!167;UBERON:0000062!3.14e-08!511;UBERON:0000926!6.57e-07!448;UBERON:0004120!6.57e-07!448;UBERON:0006603!6.57e-07!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.02e-39,98;UBERON:0003061,7.02e-39,98;UBERON:0002371,3.30e-36,76;UBERON:0002193,2.43e-35,108;UBERON:0002405,2.21e-34,93;UBERON:0001474,1.73e-32,82;UBERON:0004765,2.59e-28,90;UBERON:0001434,2.86e-25,100;UBERON:0003081,6.33e-18,203;UBERON:0002204,2.16e-12,167;UBERON:0000926,5.76e-11,315;UBERON:0004120,5.76e-11,315;UBERON:0006603,5.76e-11,315;UBERON:0002384,2.17e-09,371 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0.872338524100369,0,0,0,0.245733936501509,0,0,0,0,0.331397375727916,0,0.602694528023977,0,0,0,0,0.313454721478088,0,0,0,0,0.0821005894499457,0.0787107813136792,3.54027849164014,1.53531759238885,1.23852898652861,0,0,0,0,0,0,3.87796785972314,4.41197784434312,5.4252717678963,0.671746422719773,0.647787332037959,0.257575567634187,1.74477886535478,1.51150377475524,2.42584061187816,4.88100977501938,1.23350366406548,2.78735733805593,23.5907761704163,29.2023205443175,35.2358522533992,6.20542225325913,5.16387746867061,2.70852973188684,1.69418105588344,1.63743690034707,2.69668181334102,17.7528657575123,10.9115869205872,9.59005688698562,27.7075092156842,29.7200849856231,33.2455305415501,24.9579945220582,19.8584828641899,23.0444232128363,14.0699252543776,15.1230046341858,20.1985625575758,28.4537766237683,15.0993830754902,34.4944002310564,1.47878700418359,4.03948169933583,3.35453832813401,2.58355851636939,2.55300717830561,3.05378614724452,2.56511469367124,3.58050018958362,3.83594722905731,0,0.546138611262131,0,0,0,0,0,0,0,0,0.382273228125229,0,1.68152568894461,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0.383959833463255,0,0.473554504088034,0,0,0,0,0,1.34140171940727,0,0,3.00802746381534,0.724232594804119,0,1.94653948121054,0.756278537312543,0.221729397462564,0.790513071238134,0.196468613246569,0,0,1.29818957461873,1.74129737299267,1.06366368415092,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0.286836620748814,0.709336764396714,0,0,0.24666754841716,0,0,0.326923806226917,0.151357427644931,0,0.234321431833797,0,0,0.298897361103602,0.23486899728753,0,0,0.816616685019573,0,0.826606249406124,3.56400857184616,2.47266929278557,0,0,0.168336113954066,0,0.831192346452549,0,0.612975591598039,1.35214253015937,0,1.25572744982203,7.47450860864986,2.96704661623387,1.80054657650641,5.15262646192194,1.54584324027377,1.48893485065272,0.168776332241266,0,0.757301322732344,5.89119351310716,6.14255015911485,0,0.10075209822764,0.169560592310488,0,0,0,0,0,0,0.207322110030741,0,0,0,2.57296375277154,0,1.39310378409594,0,0.118306800039844,0.842923450390509,0.482022059766964,1.10293972732394,0.435758888184812,0,0.943819157121151,0.784885860501384,1.92373578473195,0,0,0,0,0,0.982827216677626,0,0,0,0.343135620597051,0,0,0,0,0.325808305310325,1.03993478527958,0,0.463721619900307,0.469634776943287,0,0,0.570762456703795,0,0,0.984868024349589,0.702012795417713,0.445893486866185,0.93733833986777,0.335964256397719,0.283550194484773,0,0,0,0,0,0,0,0.25248486685276,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0.26593811658487,1.04007436911366,0,0,0,0,1.08524321078289,0,0,0,0.791951872933429,0.602878754119172,0.871533458600294,0,0,0,0,0.239624855491583,0,0,0.434343920002738,0,0.358121926479791,0,0.197030760201927,0,0.256686072559497,0,0,0,0,0,0,0,0,0.36807447515742,0,0.271265023699736,5.19927153827018,6.78030157429215,13.7201101079523,13.3541213091693,0,0,0,0,0,0.695068915744663,0,0.343143423810856,1.03384013061444,1.2942852049117,1.28073069364133,0,0,0,0,0,0,0.128139149255701,0,0,0,0.308419387605311,0.177561725313127,0.410635780069046,0.519254429183621,0.232420756919918,0,0.601519410909855,0,0.918515585316854,0.182091168006717,0,0,0,0,0,0.211103257785751,0,0,0.647747748306418,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0.082509499920588,0,0,0,0.386682873168488,0.154048617114644,0.307007349452259,0.137836572484531,0.107420244868274,0,0.255679882248303,0.356128142586949,0.165284915360978,0,0.255225424989168,0.10115778085555,0.464845549297286,0,0,0.308033580176089,0,0,0.18532421910392,0,0,0.632758849437452,2.09693213316207,0.255897791311334,0,0,0,0,0.274537029736055,0,0,0,0,0.48763373908959,0.731140468893853,0,0.272999822815972,0.282810863907425,0,0,1.32687795048244,1.75380354101505,0.578775534266688,0,0,0,0,0.143411352204052,0.294747123039363,0,0,0.422215270595328,0.987884678879706,0,0,0,0,0,0.188287601553558,0,0,0,0,0,1.52927441428475,0,0,1.64544909234478,0.648473311192717,1.08006287447623,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0.211125408127993,1.39473591775749,3.59169090190492,0,0,0,0.933118762985422,0,0.358042349351218,0,0.986434056369336,0,0,0,0.0927680981618513,0,0,0,2.17499872630438,0.1137934482855,0,1.41832609060762,0,0,0.173624994933292,0,0,0,0.110579259931225,0.591095237907095,0.219385397153973,3.37709236908869,0,0.230850775511391,0.113942055847001,0,0,0,3.19001159731919,0.915975934018623,1.5991043280559,0,0,0,0,0,0,0,0,0.421996129056054,0.816164040795739,0,0,2.98578579323551,0.707660516026713,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,2.21153028699708,0.450970258243478,0,0,0,0,0,0,6.65638430463066,0,0.0979923974143777,0.174118413160805,1.04836000945218,0,0.677294319023596,0.511625219603299,0.492692742319255,0.387956065953678,0,0.225980740780532,0,0,0,0,0.240476460754601,1.06726497369676,0,0,0,0,0.288109595976299,0,1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| ||
|short_description=p3@IL15 | |||
}} | }} |
Latest revision as of 20:43, 15 September 2015
Short description: | p3@IL15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_IL15_5end |
Coexpression cluster: | C681_immature_CD14_migratory_CD34_Eosinophils_Basophils_Dendritic |
Association with transcript: | 0bp_to_ENST00000529613_5end |
EntrezGene: | IL15 |
HGNC: | 5977 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.79e-66 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.79e-66 | 42 |
defensive cell | 3.97e-56 | 48 |
phagocyte | 3.97e-56 | 48 |
macrophage dendritic cell progenitor | 9.87e-49 | 61 |
monopoietic cell | 2.62e-48 | 59 |
monocyte | 2.62e-48 | 59 |
monoblast | 2.62e-48 | 59 |
promonocyte | 2.62e-48 | 59 |
granulocyte monocyte progenitor cell | 4.78e-43 | 67 |
myeloid leukocyte | 1.12e-42 | 72 |
myeloid lineage restricted progenitor cell | 1.18e-41 | 66 |
myeloid cell | 2.70e-29 | 108 |
common myeloid progenitor | 2.70e-29 | 108 |
leukocyte | 6.49e-24 | 136 |
nongranular leukocyte | 6.27e-22 | 115 |
hematopoietic lineage restricted progenitor cell | 1.15e-18 | 120 |
hematopoietic stem cell | 2.87e-16 | 168 |
hematopoietic oligopotent progenitor cell | 2.56e-15 | 161 |
hematopoietic multipotent progenitor cell | 2.56e-15 | 161 |
hematopoietic cell | 1.20e-14 | 177 |
intermediate monocyte | 2.04e-14 | 9 |
CD14-positive, CD16-positive monocyte | 2.04e-14 | 9 |
mesenchymal cell | 2.83e-10 | 354 |
connective tissue cell | 1.09e-09 | 361 |
conventional dendritic cell | 1.89e-08 | 8 |
motile cell | 4.27e-08 | 386 |
multi fate stem cell | 8.60e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.02e-39 | 98 |
blood island | 7.02e-39 | 98 |
bone marrow | 3.30e-36 | 76 |
hemolymphoid system | 2.43e-35 | 108 |
immune system | 2.21e-34 | 93 |
bone element | 1.73e-32 | 82 |
skeletal element | 2.59e-28 | 90 |
skeletal system | 2.86e-25 | 100 |
lateral plate mesoderm | 6.33e-18 | 203 |
musculoskeletal system | 2.16e-12 | 167 |
mesoderm | 5.76e-11 | 315 |
mesoderm-derived structure | 5.76e-11 | 315 |
presumptive mesoderm | 5.76e-11 | 315 |
connective tissue | 2.17e-09 | 371 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 2.18e-08 | 5 |
myotonic disease | 2.18e-08 | 5 |
muscle tissue disease | 2.18e-08 | 5 |
myopathy | 2.18e-08 | 5 |
muscular disease | 2.18e-08 | 5 |
myotonic dystrophy | 2.18e-08 | 5 |