FFCP PHASE1:Hg19::chr7:121513478..121513517,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5803 | |EntrezGene=5803 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9685 | |HGNC=9685 | ||
|TSSclassifier=strong | |||
|UniProt=C9JFM0 | |UniProt=C9JFM0 | ||
|association_with_transcript=63bp_to_ENST00000449182_5end | |association_with_transcript=63bp_to_ENST00000449182_5end | ||
|cluster_id=chr7:121513478..121513517,+ | |||
|coexpression_cluster_id=C361 | |||
|description=CAGE_peak_4_at_PTPRZ1_5end | |description=CAGE_peak_4_at_PTPRZ1_5end | ||
|id=chr7:121513478..121513517,+ | |id=chr7:121513478..121513517,+ | ||
|ontology_enrichment_celltype=CL:0000047!3.86e-13!8;CL:0000540!4.87e-10!6;CL:0000031!4.87e-10!6;CL:0000404!4.87e-10!6;CL:0002319!3.71e-09!25;CL:0000221!7.74e-08!71;CL:0002322!1.56e-07!5 | |ontology_enrichment_celltype=CL:0000047!3.86e-13!8;CL:0000540!4.87e-10!6;CL:0000031!4.87e-10!6;CL:0000404!4.87e-10!6;CL:0002319!3.71e-09!25;CL:0000221!7.74e-08!71;CL:0002322!1.56e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000540;6.36e-19;6!CL:0000404;6.36e-19;6!CL:0002319;5.02e-10;25!CL:0002322;1.37e-09;5!CL:0000047;4.62e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,3.62e-25,8;CL:0000540,7.81e-19,6;CL:0000031,7.81e-19,6;CL:0000404,7.81e-19,6;CL:0002319,4.94e-10,25;CL:0002322,3.16e-09,5;CL:0000221,6.07e-09,72 | |||
|ontology_enrichment_development_v019=CL:0000031;6.36e-19;6!UBERON:0006241;4.52e-10;3!UBERON:0003057;4.52e-10;3!UBERON:0006215;7.98e-10;3!UBERON:0006601;3.99e-09;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!1.36e-57!86;UBERON:0001017!2.17e-55!82;UBERON:0000073!1.10e-51!94;UBERON:0001016!1.10e-51!94;UBERON:0001049!3.19e-49!57;UBERON:0005068!3.19e-49!57;UBERON:0006241!3.19e-49!57;UBERON:0007135!3.19e-49!57;UBERON:0004121!2.19e-45!169;UBERON:0000924!1.03e-43!173;UBERON:0006601!1.03e-43!173;UBERON:0003075!2.79e-40!86;UBERON:0007284!2.79e-40!86;UBERON:0002616!6.67e-40!59;UBERON:0000955!9.95e-39!69;UBERON:0006238!9.95e-39!69;UBERON:0002780!3.48e-38!41;UBERON:0001890!3.48e-38!41;UBERON:0006240!3.48e-38!41;UBERON:0002346!1.18e-37!90;UBERON:0002020!1.77e-37!34;UBERON:0003528!1.77e-37!34;UBERON:0001893!3.45e-37!34;UBERON:0003080!5.41e-37!42;UBERON:0002791!6.18e-36!33;UBERON:0000153!1.10e-35!129;UBERON:0007811!1.10e-35!129;UBERON:0001869!6.56e-35!32;UBERON:0000033!1.61e-34!123;UBERON:0007023!1.82e-29!115;UBERON:0003056!2.47e-29!61;UBERON:0000956!5.90e-27!25;UBERON:0000203!5.90e-27!25;UBERON:0002619!3.11e-23!22;UBERON:0001950!5.30e-21!20;UBERON:0000064!2.43e-13!219;UBERON:0003076!5.80e-13!15;UBERON:0003057!5.80e-13!15;UBERON:0002308!6.80e-12!9;UBERON:0000125!6.80e-12!9;UBERON:0000475!1.73e-10!365;UBERON:0009663!2.39e-09!7;UBERON:0000025!2.58e-09!194;UBERON:0000200!3.35e-09!6;UBERON:0004733!4.16e-09!12;UBERON:0002028!4.16e-09!12;UBERON:0007277!4.16e-09!12;UBERON:0002420!4.48e-09!9;UBERON:0007245!4.48e-09!9;UBERON:0010009!4.48e-09!9;UBERON:0010011!4.48e-09!9;UBERON:0000454!4.48e-09!9;UBERON:0004111!4.53e-09!241;UBERON:0000062!5.11e-09!511;UBERON:0000922!7.24e-09!612;UBERON:0002298!1.12e-08!8;UBERON:0004732!3.11e-08!13;UBERON:0000483!5.35e-08!309;UBERON:0000119!9.59e-08!312;UBERON:0000468!1.29e-07!659;UBERON:0001872!2.37e-07!5;UBERON:0002021!3.30e-07!5 | |ontology_enrichment_uberon=UBERON:0005743!1.36e-57!86;UBERON:0001017!2.17e-55!82;UBERON:0000073!1.10e-51!94;UBERON:0001016!1.10e-51!94;UBERON:0001049!3.19e-49!57;UBERON:0005068!3.19e-49!57;UBERON:0006241!3.19e-49!57;UBERON:0007135!3.19e-49!57;UBERON:0004121!2.19e-45!169;UBERON:0000924!1.03e-43!173;UBERON:0006601!1.03e-43!173;UBERON:0003075!2.79e-40!86;UBERON:0007284!2.79e-40!86;UBERON:0002616!6.67e-40!59;UBERON:0000955!9.95e-39!69;UBERON:0006238!9.95e-39!69;UBERON:0002780!3.48e-38!41;UBERON:0001890!3.48e-38!41;UBERON:0006240!3.48e-38!41;UBERON:0002346!1.18e-37!90;UBERON:0002020!1.77e-37!34;UBERON:0003528!1.77e-37!34;UBERON:0001893!3.45e-37!34;UBERON:0003080!5.41e-37!42;UBERON:0002791!6.18e-36!33;UBERON:0000153!1.10e-35!129;UBERON:0007811!1.10e-35!129;UBERON:0001869!6.56e-35!32;UBERON:0000033!1.61e-34!123;UBERON:0007023!1.82e-29!115;UBERON:0003056!2.47e-29!61;UBERON:0000956!5.90e-27!25;UBERON:0000203!5.90e-27!25;UBERON:0002619!3.11e-23!22;UBERON:0001950!5.30e-21!20;UBERON:0000064!2.43e-13!219;UBERON:0003076!5.80e-13!15;UBERON:0003057!5.80e-13!15;UBERON:0002308!6.80e-12!9;UBERON:0000125!6.80e-12!9;UBERON:0000475!1.73e-10!365;UBERON:0009663!2.39e-09!7;UBERON:0000025!2.58e-09!194;UBERON:0000200!3.35e-09!6;UBERON:0004733!4.16e-09!12;UBERON:0002028!4.16e-09!12;UBERON:0007277!4.16e-09!12;UBERON:0002420!4.48e-09!9;UBERON:0007245!4.48e-09!9;UBERON:0010009!4.48e-09!9;UBERON:0010011!4.48e-09!9;UBERON:0000454!4.48e-09!9;UBERON:0004111!4.53e-09!241;UBERON:0000062!5.11e-09!511;UBERON:0000922!7.24e-09!612;UBERON:0002298!1.12e-08!8;UBERON:0004732!3.11e-08!13;UBERON:0000483!5.35e-08!309;UBERON:0000119!9.59e-08!312;UBERON:0000468!1.29e-07!659;UBERON:0001872!2.37e-07!5;UBERON:0002021!3.30e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0003528;4.74e-19;34!UBERON:0002020;4.74e-19;34!UBERON:0000073;1.04e-18;53!UBERON:0002616;1.04e-18;53!UBERON:0002791;5.08e-18;32!UBERON:0001869;1.75e-17;32!UBERON:0000956;4.26e-17;25!UBERON:0000203;4.26e-17;25!UBERON:0001893;1.05e-16;34!UBERON:0001017;1.58e-16;75!UBERON:0000955;3.46e-16;68!UBERON:0004733;1.23e-14;12!UBERON:0002028;1.23e-14;12!UBERON:0002780;3.95e-14;41!UBERON:0001890;3.95e-14;41!UBERON:0001016;4.41e-14;83!UBERON:0002619;6.55e-14;22!UBERON:0004732;2.10e-13;13!UBERON:0001950;8.58e-13;20!UBERON:0000200;2.46e-12;6!UBERON:0002298;4.58e-12;6!UBERON:0002680;1.87e-11;9!UBERON:0001895;1.87e-11;9!UBERON:0002240;4.52e-10;3!UBERON:0005174;4.52e-10;3!UBERON:0001137;4.52e-10;3!UBERON:0001870;9.87e-10;3!UBERON:0000988;2.12e-09;3!UBERON:0000125;6.09e-08;9!UBERON:0002308;6.09e-08;9!UBERON:0002702;3.78e-07;2!UBERON:0011216;7.92e-07;132!UBERON:0003127;8.23e-07;2!UBERON:0002771;8.23e-07;2!UBERON:0002148;8.23e-07;2!UBERON:0006331;8.23e-07;2!UBERON:0009662;8.23e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.50e-52,81;UBERON:0001016,2.35e-46,89;UBERON:0001049,4.23e-40,56;UBERON:0005068,4.23e-40,56;UBERON:0006241,4.23e-40,56;UBERON:0007135,4.23e-40,56;UBERON:0000073,1.22e-33,53;UBERON:0002616,1.22e-33,53;UBERON:0004121,2.02e-32,171;UBERON:0000924,2.02e-32,171;UBERON:0006601,2.02e-32,171;UBERON:0000955,3.57e-31,68;UBERON:0006238,3.57e-31,68;UBERON:0010371,6.11e-28,104;UBERON:0003075,5.55e-27,82;UBERON:0007284,5.55e-27,82;UBERON:0002346,2.31e-25,86;UBERON:0003528,2.26e-23,34;UBERON:0002020,2.26e-23,34;UBERON:0003076,2.39e-22,15;UBERON:0003057,2.39e-22,15;UBERON:0002780,3.19e-21,41;UBERON:0001890,3.19e-21,41;UBERON:0003080,3.19e-21,41;UBERON:0006240,3.19e-21,41;UBERON:0001893,1.24e-20,34;UBERON:0001869,1.41e-19,32;UBERON:0002791,1.58e-19,32;UBERON:0011216,1.05e-18,223;UBERON:0000956,5.10e-17,25;UBERON:0000203,5.10e-17,25;UBERON:0010314,3.02e-16,132;UBERON:0004733,1.00e-14,12;UBERON:0002028,1.00e-14,12;UBERON:0007277,1.00e-14,12;UBERON:0003056,2.07e-14,61;UBERON:0002619,8.69e-14,22;UBERON:0004732,1.74e-13,13;UBERON:0001950,9.04e-13,20;UBERON:0000200,1.74e-12,6;UBERON:0002298,3.46e-12,6;UBERON:0007023,4.96e-12,114;UBERON:0002680,2.10e-11,9;UBERON:0001895,2.10e-11,9;UBERON:0010092,2.10e-11,9;UBERON:0002240,2.61e-10,3;UBERON:0005174,2.61e-10,3;UBERON:0001137,2.61e-10,3;UBERON:0001870,1.29e-09,3;UBERON:0000988,2.48e-09,3;UBERON:0000125,7.98e-08,9;UBERON:0002308,7.98e-08,9;UBERON:0002702,2.83e-07,2;UBERON:0002771,5.93e-07,2;UBERON:0002148,6.70e-07,2;UBERON:0006331,6.70e-07,2;UBERON:0009662,6.70e-07,2;UBERON:0003127,9.33e-07,2 | |||
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|short_description=p4@PTPRZ1 | |short_description=p4@PTPRZ1 | ||
}} | }} |
Latest revision as of 23:00, 15 September 2015
Short description: | p4@PTPRZ1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PTPRZ1_5end |
Coexpression cluster: | C361_Neural_Astrocyte_Neurons_spinal_Chondrocyte_Fibroblast_sacrococcigeal |
Association with transcript: | 63bp_to_ENST00000449182_5end |
EntrezGene: | PTPRZ1 |
HGNC: | 9685 |
UniProt: | C9JFM0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 3.62e-25 | 8 |
neuron | 7.81e-19 | 6 |
neuroblast | 7.81e-19 | 6 |
electrically signaling cell | 7.81e-19 | 6 |
neural cell | 4.94e-10 | 25 |
embryonic stem cell | 3.16e-09 | 5 |
ectodermal cell | 6.07e-09 | 72 |