FFCP PHASE1:Hg19::chr12:106641662..106641673,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10970 | |EntrezGene=10970 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16991 | |HGNC=16991 | ||
|TSSclassifier=strong | |||
|UniProt=Q07065 | |UniProt=Q07065 | ||
|association_with_transcript=39bp_to_NM_006825,uc001tlk.2_5end | |association_with_transcript=39bp_to_NM_006825,uc001tlk.2_5end | ||
|cluster_id=chr12:106641662..106641673,- | |||
|description=CAGE_peak_5_at_CKAP4_5end | |description=CAGE_peak_5_at_CKAP4_5end | ||
|id=chr12:106641662..106641673,- | |id=chr12:106641662..106641673,- | ||
|ontology_enrichment_celltype=CL:0000055!6.53e-29!180;CL:0000680!2.18e-19!57;CL:0000056!2.18e-19!57;CL:0000355!2.18e-19!57;CL:0000183!8.73e-18!59;CL:0000187!9.08e-18!54;CL:0000393!4.27e-15!60;CL:0000211!4.27e-15!60;CL:0000057!1.06e-14!75;CL:0000048!6.35e-14!430;CL:0000723!8.18e-14!436;CL:0000192!4.81e-13!42;CL:0000514!4.81e-13!42;CL:0000034!2.17e-12!444;CL:0000222!2.05e-11!119;CL:0000359!2.92e-11!32;CL:0002334!1.37e-08!12;CL:0002371!1.49e-08!591;CL:0000136!2.71e-08!15;CL:0000144!5.55e-08!625;CL:0002494!6.47e-07!16 | |ontology_enrichment_celltype=CL:0000055!6.53e-29!180;CL:0000680!2.18e-19!57;CL:0000056!2.18e-19!57;CL:0000355!2.18e-19!57;CL:0000183!8.73e-18!59;CL:0000187!9.08e-18!54;CL:0000393!4.27e-15!60;CL:0000211!4.27e-15!60;CL:0000057!1.06e-14!75;CL:0000048!6.35e-14!430;CL:0000723!8.18e-14!436;CL:0000192!4.81e-13!42;CL:0000514!4.81e-13!42;CL:0000034!2.17e-12!444;CL:0000222!2.05e-11!119;CL:0000359!2.92e-11!32;CL:0002334!1.37e-08!12;CL:0002371!1.49e-08!591;CL:0000136!2.71e-08!15;CL:0000144!5.55e-08!625;CL:0002494!6.47e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:0000359;7.92e-13;32!CL:0000187;7.15e-12;55!CL:0000192;1.47e-11;43!CL:0002334;2.59e-10;12!CL:0000393;1.80e-09;61!CL:0000211;1.80e-09;61!CL:0000136;2.66e-08;13!CL:0002494;2.72e-08;16 | |ontology_enrichment_celltype_v019=CL:0000359;7.92e-13;32!CL:0000187;7.15e-12;55!CL:0000192;1.47e-11;43!CL:0002334;2.59e-10;12!CL:0000393;1.80e-09;61!CL:0000211;1.80e-09;61!CL:0000136;2.66e-08;13!CL:0002494;2.72e-08;16 | ||
|ontology_enrichment_celltype_v019_2=CL:0000048,7.49e-25,427;CL:0000723,4.63e-24,433;CL:0000680,3.46e-23,58;CL:0000056,3.46e-23,58;CL:0000355,3.46e-23,58;CL:0000034,3.25e-22,441;CL:0000187,3.44e-21,55;CL:0000393,5.03e-17,61;CL:0000211,5.03e-17,61;CL:0000057,2.83e-16,76;CL:0000192,2.37e-15,43;CL:0000514,2.37e-15,43;CL:0000359,3.68e-13,32;CL:0002320,5.27e-11,361;CL:0002334,2.69e-10,12;CL:0000136,6.27e-10,15;CL:0000134,1.71e-09,354;CL:0000222,3.42e-09,121;CL:0002494,3.21e-08,16;CL:0000219,1.88e-07,386 | |||
|ontology_enrichment_development_v019=CL:0000355;2.67e-12;58!CL:0000514;1.47e-11;43 | |ontology_enrichment_development_v019=CL:0000355;2.67e-12;58!CL:0000514;1.47e-11;43 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004290!1.43e-19!70;UBERON:0000914!1.98e-19!83;UBERON:0002329!1.98e-19!83;UBERON:0003077!1.98e-19!83;UBERON:0003059!1.98e-19!83;UBERON:0007282!1.98e-19!83;UBERON:0009618!1.98e-19!83;UBERON:0007285!1.98e-19!83;UBERON:0001134!2.57e-19!61;UBERON:0002036!2.57e-19!61;UBERON:0003082!2.57e-19!61;UBERON:0002385!7.71e-19!63;UBERON:0001015!7.71e-19!63;UBERON:0000383!7.71e-19!63;UBERON:0000486!2.02e-17!82;UBERON:0002204!1.66e-13!167;UBERON:0001637!1.96e-12!42;UBERON:0003509!1.96e-12!42;UBERON:0004572!1.96e-12!42;UBERON:0004872!6.08e-12!84;UBERON:0001009!8.48e-12!113;UBERON:0004535!8.97e-12!110;UBERON:0004573!2.66e-11!33;UBERON:0004571!2.66e-11!33;UBERON:0002049!5.00e-11!79;UBERON:0007798!5.00e-11!79;UBERON:0000055!6.62e-11!69;UBERON:0001981!4.93e-10!60;UBERON:0007500!4.93e-10!60;UBERON:0004537!4.93e-10!60;UBERON:0006965!4.93e-10!60;UBERON:0005256!1.05e-09!143;UBERON:0000948!1.46e-08!24;UBERON:0005498!1.46e-08!24;UBERON:0004140!1.46e-08!24;UBERON:0009881!1.46e-08!24;UBERON:0004141!1.46e-08!24;UBERON:0003084!1.46e-08!24;UBERON:0007005!1.46e-08!24;UBERON:0004139!1.46e-08!24;UBERON:0004291!1.46e-08!24;UBERON:0007100!3.27e-08!27;UBERON:0001013!7.18e-08!14;UBERON:0000490!1.25e-07!138 | |ontology_enrichment_uberon=UBERON:0004290!1.43e-19!70;UBERON:0000914!1.98e-19!83;UBERON:0002329!1.98e-19!83;UBERON:0003077!1.98e-19!83;UBERON:0003059!1.98e-19!83;UBERON:0007282!1.98e-19!83;UBERON:0009618!1.98e-19!83;UBERON:0007285!1.98e-19!83;UBERON:0001134!2.57e-19!61;UBERON:0002036!2.57e-19!61;UBERON:0003082!2.57e-19!61;UBERON:0002385!7.71e-19!63;UBERON:0001015!7.71e-19!63;UBERON:0000383!7.71e-19!63;UBERON:0000486!2.02e-17!82;UBERON:0002204!1.66e-13!167;UBERON:0001637!1.96e-12!42;UBERON:0003509!1.96e-12!42;UBERON:0004572!1.96e-12!42;UBERON:0004872!6.08e-12!84;UBERON:0001009!8.48e-12!113;UBERON:0004535!8.97e-12!110;UBERON:0004573!2.66e-11!33;UBERON:0004571!2.66e-11!33;UBERON:0002049!5.00e-11!79;UBERON:0007798!5.00e-11!79;UBERON:0000055!6.62e-11!69;UBERON:0001981!4.93e-10!60;UBERON:0007500!4.93e-10!60;UBERON:0004537!4.93e-10!60;UBERON:0006965!4.93e-10!60;UBERON:0005256!1.05e-09!143;UBERON:0000948!1.46e-08!24;UBERON:0005498!1.46e-08!24;UBERON:0004140!1.46e-08!24;UBERON:0009881!1.46e-08!24;UBERON:0004141!1.46e-08!24;UBERON:0003084!1.46e-08!24;UBERON:0007005!1.46e-08!24;UBERON:0004139!1.46e-08!24;UBERON:0004291!1.46e-08!24;UBERON:0007100!3.27e-08!27;UBERON:0001013!7.18e-08!14;UBERON:0000490!1.25e-07!138 | ||
|ontology_enrichment_uberon_v019=UBERON:0002385;6.52e-12;31!UBERON:0001015;6.52e-12;31!UBERON:0000383;6.52e-12;31!UBERON:0004573;4.44e-11;33!UBERON:0004571;4.44e-11;33!UBERON:0001637;1.10e-09;42!UBERON:0003509;1.10e-09;42!UBERON:0004572;1.10e-09;42!UBERON:0001013;2.12e-09;14!UBERON:0000948;9.40e-09;22!UBERON:0001134;4.39e-08;16!UBERON:0002036;4.39e-08;16!UBERON:0002204;4.65e-08;70!UBERON:0004457;5.98e-08;9!UBERON:0000042;5.98e-08;9!UBERON:0007100;1.10e-07;25 | |ontology_enrichment_uberon_v019=UBERON:0002385;6.52e-12;31!UBERON:0001015;6.52e-12;31!UBERON:0000383;6.52e-12;31!UBERON:0004573;4.44e-11;33!UBERON:0004571;4.44e-11;33!UBERON:0001637;1.10e-09;42!UBERON:0003509;1.10e-09;42!UBERON:0004572;1.10e-09;42!UBERON:0001013;2.12e-09;14!UBERON:0000948;9.40e-09;22!UBERON:0001134;4.39e-08;16!UBERON:0002036;4.39e-08;16!UBERON:0002204;4.65e-08;70!UBERON:0004457;5.98e-08;9!UBERON:0000042;5.98e-08;9!UBERON:0007100;1.10e-07;25 | ||
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| ||
|short_description=p5@CKAP4 | |short_description=p5@CKAP4 | ||
}} | }} |
Latest revision as of 02:22, 16 September 2015
Short description: | p5@CKAP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CKAP4_5end |
Coexpression cluster: | NA |
Association with transcript: | 39bp_to_NM_006825, uc001tlk.2_5end |
EntrezGene: | CKAP4 |
HGNC: | 16991 |
UniProt: | Q07065 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 7.49e-25 | 427 |
somatic stem cell | 4.63e-24 | 433 |
muscle precursor cell | 3.46e-23 | 58 |
myoblast | 3.46e-23 | 58 |
multi-potent skeletal muscle stem cell | 3.46e-23 | 58 |
stem cell | 3.25e-22 | 441 |
muscle cell | 3.44e-21 | 55 |
electrically responsive cell | 5.03e-17 | 61 |
electrically active cell | 5.03e-17 | 61 |
fibroblast | 2.83e-16 | 76 |
smooth muscle cell | 2.37e-15 | 43 |
smooth muscle myoblast | 2.37e-15 | 43 |
vascular associated smooth muscle cell | 3.68e-13 | 32 |
connective tissue cell | 5.27e-11 | 361 |
preadipocyte | 2.69e-10 | 12 |
fat cell | 6.27e-10 | 15 |
mesenchymal cell | 1.71e-09 | 354 |
mesodermal cell | 3.42e-09 | 121 |
cardiocyte | 3.21e-08 | 16 |
motile cell | 1.88e-07 | 386 |